| Gene ID | Annotation |
|---|---|
| Am02G027310.1 | RECQ helicase l1 |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am02G027310.1 | mRNA | Chr02 | 165719910 | 165726918 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF00271.34 | Helicase_C | 406 | 511 | 8.30E-19 |
| PF00270.32 | DEAD | 198 | 367 | 2.70E-16 |
| PF16124.8 | RecQ_Zn_bind | 524 | 593 | 9.70E-14 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0005737 | cytoplasm | Cellular Component |
| GO:0016787 | hydrolase activity | Molecular Function |
| GO:0003676 | nucleic acid binding | Molecular Function |
| GO:0042631 | cellular response to water deprivation | Biological Process |
| GO:0070417 | cellular response to cold | Biological Process |
| InterPro term | Description |
|---|---|
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR001650 | Helicase, C-terminal |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| IPR002464 | DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site |
| IPR004589 | DNA helicase, ATP-dependent, RecQ type |
| IPR011545 | DEAD/DEAH box helicase domain |
| IPR032284 | ATP-dependent DNA helicase RecQ, zinc-binding domain |
| trEMBL term | Description |
|---|---|
| A0A396JRC9 | _ |
| SwissProt term | Description |
|---|---|
| RQL1_ARATH | ATP-dependent DNA helicase Q-like 1 |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT3G05740 | RECQ helicase l1 |
| Medicago sativa L. | MsG0180004647.01.T01 | _ |
| Oryza sativa L. | _ | _ |
| Cucumis sativus L. | Csa013804 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000034s00002985.1 | _ |
| Codonopsis lanceolata | Cl_chr05_21160T | _ |
| Arachis hypogaea L. | AH19G17360.1 | ATP-dependent DNA helicase Q-like 1 like |