| Gene ID | Annotation |
|---|---|
| Am02G027200.1 | PRP38 family protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am02G027200.1 | mRNA | Chr02 | 165550638 | 165553009 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF03371.18 | PRP38 | 10 | 173 | 7.80E-62 |
| PF12871.10 | PRP38_assoc | 181 | 271 | 7.20E-06 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0005681 | spliceosomal complex | Cellular Component |
| GO:0000398 | mRNA splicing, via spliceosome | Biological Process |
| GO:0016020 | membrane | Cellular Component |
| InterPro term | Description |
|---|---|
| IPR024767 | Pre-mRNA-splicing factor 38, C-terminal |
| IPR005037 | Pre-mRNA-splicing factor 38 |
| trEMBL term | Description |
|---|---|
| A0A371I2B6 | _ |
| SwissProt term | Description |
|---|---|
| PRP38_ARATH | Pre-mRNA-splicing factor 38 |
| KO | Description | Enzyme |
|---|---|---|
| K12849 | pre-mRNA-splicing factor 38A |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT2G40650 | PRP38 family protein |
| Medicago sativa L. | MsG0180004639.01.T01 | _ |
| Oryza sativa L. | _ | _ |
| Cucumis sativus L. | Csa013910 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur001490s00024449.1 | _ |
| Codonopsis lanceolata | Cl_chr02_59810T | _ |
| Arachis hypogaea L. | AH19G17460.1 | Pre-mRNA-splicing factor 38 like |