Detail information of Am02G027030.1 Annotation
Gene IDAnnotation
Am02G027030.1 SERINE-ARGININE PROTEIN 30
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am02G027030.1mRNAChr02165123304165129924-

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF00076.25RRM_19763.80E-30
PF00076.25RRM_11131753.80E-30
Gene family
Gene familySubfamily
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Gene Ontology
GO termDescriptionCategory
GO:0005634nucleusCellular Component
GO:0000398mRNA splicing, via spliceosomeBiological Process
GO:0005737cytoplasmCellular Component
GO:0070013intracellular organelle lumenCellular Component
GO:0016020membraneCellular Component

InterPro
InterPro termDescription
IPR035979RNA-binding domain superfamily
IPR000504RNA recognition motif domain
IPR012677Nucleotide-binding alpha-beta plait domain superfamily

trEMBL
trEMBL termDescription
A0A444XKR8 _

SwissProt
SwissProt termDescription
SR30_ARATHSerine/arginine-rich splicing factor SR30

KEGG
KODescriptionEnzyme
K12890serine/arginine-rich splicing factor 1

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT1G09140 SERINE-ARGININE PROTEIN 30
Medicago sativa L.MsG0780041523.01.T01 _
Oryza sativa L.LOC_Os07g47630.1RNA recognition motif containing protein, expressed
Cucumis sativus L.Csa001513 _
Glycyrrhiza uralensis Fisch.Glyur000001s00000059.3 _
Codonopsis lanceolataCl_chr05_11350T _
Arachis hypogaea L.AH19G17990.1Serine/arginine-rich splicing factor SR30 like

Expression pattern