Gene detail

Detail information of Am02G026890.1 Annotation

Gene ID	Annotation
Am02G026890.1	Zinc finger, RING-type;Transcription factor jumonji/aspartyl beta-hydroxylase

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am02G026890.1	mRNA	Chr02	164760650	164766893	-

Sequences

CDS:

>Am02G026890.1
ATGGATCACGCGCGATCGAACAACAACAGCAACGGTGATGAGAATGTAGGGATTCCAGACGATTTGCGTTGTAAGAGGTCAGATGGGAAGCAATGGAGATGTACAGCGATGTCGATGCCGGATAAGACAGTATGTGAGAAACACTACATTCAAGCGAAGAAGAGAGCTGCGAATTCCGCCATGAGAGCTAATCTCAAGAAAGCTAAGAGGAAATCACAGTCATACGGTGACTCTGATATTTATTTGGAGAGTAAGAGTGATGATTTTGATGCACCTCTTTCAACTGCCCTTAATAATAACAATAACCACCGTGGGAAGAAGTTATTCGATCAGGTTTCCAAAAACCAGTTTCGTTATAAGCCTAACTCTGATACCAGAAAGGGTTCCTCTGCTCATCATGCCCCCAAGGACGGTGATGATTCCCCTGATCGTGAGAATGGCGATGAGGATGAGGATGAGGATTTGGATGTCCCTCTTAATGAAGATAACTCCGCCTCTGATGAATCACAGCATGGTTCTGGTGCTGAGGATTCTGCCAGGAAACGATTGCACGGGAGCTTGGATGCCAATGCCACTACTGAATATTCTGATGGAACCTCAGATTCTTCTCACGATACTGGTGGGCAGACTTGCCATCAGTGCAGGAAGAATGTTAGGGACAGAGTTACTTGGTGCCTTAGGTGTGATAGGAGAGGATACTGTGATAGCTGTATATCGACATGGTATTCAGGCATTTCGATGGATGAAATTCAGCGGATATGTCCTGCATGCCGTGGTATATGTAATTGTAAAATTTGCTTACGCAGTGATAATTCAATCAAGGTTCGGATACGTGAGATACCTGTATTAGATAAGTTACAGTATCTTCACTTGCTGCTCTCGTCGGTGCTTCCTGTAGTAAAGCAGATCCATCGTGAACAGTGTTTTGAAGTTGAACTTGAAAAGAAGTTGCGTGGTGCTGAAATAGACCTTCCCAGGACAAAATTGAATGCAGATGAGCAGATGTGCTGCAATTTTTGTAGGATACCTATTACTGATTATCACCGACGCTGTCCAAGTTGTTCATATGATTTGTGCTTGAATTGTTGTCGAGATCTTCGAGATGCAACCGTACATCACAGTAATGAACCCCAAGCAGAGCCAATGAAGACTAGTGATCGTAACATATTACATAAGTTTCCGCATTGGAGATCCAATGACAATGGAAGTATTCCATGCCCCCCAAAGGAGTATGGTGGTTGTGGTTGTTCATCATTGCACTTGAGTCGGATTTTCAAGATGAACTGGGTTGCAAAATTGGTGAAAAATGTAGAGGAAATGGTTTGCGGCTGCAGAATTAATGATGCCGATGGTCCACTAGAAACCGGGATGAATGCTCTTAGACTTGGTCGATATTCTGAAAGAGAGGCTGACAATGATAATTATCTTTATTGTCCAACTTCTGAAGATCTCAAAACTGATGGGATTGGCATGTTTAGAAAACACTGGAAAACTGGTGAGCCCATTATCGTGAAGCAAGTATTTGACAGGTCATCCATTTCAAGCTGGGACCCGATGGTCATATGGAGAGGAATTCTAGAGACAGCAGATGAGAAAATGAAAGATGAAAACAGAATGGTTAAGGCCATAGATTGCTTAGATGGTTCTGAGATTGATATTGAGCTTGCTCAGTTCATGAAAGGGTACACTGAGGGACGTATTCGTGAAAATGGTTGGCCTCAAATGTTGAAGTTGAAGGACTGGCCTTCACCTAGTGCGTCTGAAGAATTTCTTTTGTACCAAAGACCTGAGTTTATCAGCAAACTACCTTTACTTCAGTATATTCACTCCAAGTGGGGACTTCTCAATGTTGCAGCTAAATTACCTCACTACTCCTTGCAGAATGATGTAGGACCCAAGATCTATATATCTTATGGAATTAGTGATGAACTTGGTAGAGGTGATTCAGTGACAAATCTCCACTTTAATATGCGAGACATGGTGTACCTTTTGGTCCATACAAGTGAAGTGGAGTTGAAGGACTGGCAGAGGACTAAAATTGAAATGATGCAAAAAGCGTATAAGGAATCTGAGGCGAAAGAATCTCACATGGATCTACAAAAAAGTTCGAGAGGGAGTTCACCCGATTCATCACTTTGTACAAAAAATAGTGGACTGGATTTGGAATCAGACCAGAATAATTCGACTACGGTTCAGGGGTTTGAAATTTATTCTAGTGCTGAAGGGAATATGGTCAATAGTGAAATTCCATTCAGACAAAATGGAGACGTCTCTGAGAAAAAACATCCAGGAGTTCTTTGGGATGTCTTCCGTCGGCAGGATGTTCCAAAGGTGACTGAATATTTGAAAATGCATTCGAAGGATTTTGGGAAGTCAGATGATATAGGAAATGAATTTGTTACATGGCCTCTTTATGATGGAGCTATTTTCCTTGACAGACACCATAAGAGAAAGTTGAAGGAAGACTTTGGAGTGGAGCCGTGGTCATTTGAACAGAATCTGGGGGAAGCTATATTTGTTCCTGCTGGTTGCCCTTTCCAGGCAAGGAATATTCAGTCCACTGTTCAGTTGGGCCTTGATTTCTTGTCTCCGGAAAGCCTGGGGGAGGCTGTAAGATTGGCAGAGGAAGTCCGTTGCTTACCTAATGAACATGAGGCAAAGCTTCAAGTATTAGAGGTTGGGAAGATATCTCTTTATGCAGCAAGTTCAGCCATCAAGGATGTTCGGAAACTTGTACTTGACCCAAAACTTGGCGCAGAGATTGGATATGGAGACCCTAATTTGACTGCAATGGTTTCTGAGAATTATGAGAAAATGTCTAAGCGGAGGCAGATTACTTGTGTTTGA

Protein:

Promoter(3k):

>AM02G026890.1
GTTTATAGAGTCAAAGAGAACCCTAATGGTTCCATCAATAAATACAAAGCTCGTCTTGTAACCAAAGGGTATAACCAACAAGCTGGCCAAGACTATGATGAAACCTACTCACCTGTTGTTAAACCCACAACCATTAGAATCATTATTTCTTTTGCATTGACCTATAAGCGGGACATCCAACAAATTGATATCAATAATGCCTTCATTAATGGGCATCTAGAGGAAGATATATACATGCAACAGCCACCTAGTTTCATTAGCTCTGATAAGTCTTTGGTTTGTAAGCTACAAAGATCATTGTATGACCTAAAACAGGCGCCTAGAGCTTGGTATGAAACTTTGCACAAGTCTCTGTTACAATTTGGCTTCAAGCATAGCCAATGTGATCACTCATTGTTTGTGTTCAACTCCAAAGGCATTCACTTGTATGCACTTGTATATGTAGATGATATTTTGATTACAGGTTCCTCTACTACTCTAATCCATGATTTGATCTCCAAATTACACAAGCAGTTTGCTTTAAAACGTTTGGGTAGGCCTGAATACTTCCTAGGATTGGAAGCAAGTATCTCTCTGATGGCTCTATGCTTTTAACTCAAGCTAAATACATTCAGGACTTGCTGTCTCGTGCTAACATGCTTTATTGCAGTGCTATATCCACTCCCATGGTTGCTAACAGCAAACTCAGTAGACATGGTACAAACAAGTTGCCTACATAGTATCGCTCTATTGTTGGAGCACTGCAGTACATTACTCTCACTAGACCTGAAATTGCATACAATGTTAATAAGGTTTGTCAGGTTCCTCTCTGCACCTCTTGATAGCCATTGGAGAGCAGTCAAACGTATCTTGAGGTACCTCAGTGGTACCACCAGCTTTGGGCTCCTACTTCAACCAGCTCCTCAAGACATTCCATTCTTTCTCAGAGTGTATTGTGATTCAGATTGGGCAAGTGACCCTGATGACAGACGTTCTACTTCAGGTTCCTTCCTCTTCTTTGGTCCAAACTTGGTCTCTTGGAGCTCCAAAAAGCAGTCACTTGTTGCCAGATCATCCGCAGAAGCAGAGTACAGAAGCATGGAAAATGCCACAGCAGATCTCCTATGGTTCAGTCCCTTCTTGCAGAGTTACAGGTTCTAACTTAGTCACCTTTGCTGTTGTGTGATAACCTCAGTGCAGTACTTCTCTCCCACAACCCAGTACTTCATGCAAGGACAAAACACTTGGAACTTGATATTCATTTTGTGAGGGAGAACGTTGCAGCAAAGAAACTCCCTGTTCAACATGTCTCAAGCTCACTACAGATTGTATATGCTTTGACAAAGCCACTGCCCTCCACAAGCTTCACTGATTTGAGGTTTAAACTCAAAGTTGTCAAGTACACTAGACAACATTTGGGTTTGAAGGGGGAGTAATAGAGATATGTAATCACTTGTGTTAATTGCAAATAGAATTGTACAAGTAGAACAGTAGAGAATTGATATTGTGCCATGTGGAAGTTAGATTAGCCAACAGATTTGTACCAGTGTATATAAGCTCTGTTTGACTGAAAGTCATAATTCAATTCAATCAATATTCTCATTTAGTTACACGGTTATGAACATGTTACTTTCCCTTTATCCTCAACGGATAATAAATGTAGATCCAGATCCGACCAATTTCGGTGACTACACTTTCACTACAACCCTTGCGGTTGAGGTTCTACGACTCTACCTTGTTGGTTTCATTTCAAAAAAGGAGTTTGTGTTTTTCAAATTTCCCCTATTTGAGAGGGTTTATCGTGCATTGTTAGTATTGGATATTAGAGACTAAAAATAAGATAAATAAAGTGATATTTACAATTAGTGACCACACATTATTATGTGCGTTGCATATGTAAAAAAGTAGACCGGCTACCTGCGGTAATTTTCCACGGGTCCACCTATGGACCCCTTGTTAATGGTCCATATTAGAGCCACCATTAAATAAAGTATATATTTAATATATTTATTTTGTGCCTCTAAAAAATATATTTATTTTGTGTGAATAAAGAACAAAAAATAAATTTCTTGAGTGAGAGCTTTTTCGCCCATTGTGGTCCTATTCGGCTCGAGGGATTAGTTTCTGCAATTGCGCGCAGAAGATATCCGATTTATAGAAAAAAATAAAAAAAAAATTGTCAGGAAAAAGGAACAAAAATAATAAAAAGAAGAGGTCACACCATTCTAGTTTCTCCAAATATTTGTCAATCGAGTAAAATCAAGAGCTAAAGTAAATAACAATAATAGATATTAGCTTTGTGCTTTCCTTTTCTCCTTTTTCTCTTTTGCTTTACTTTACCAAAAAAAAAACAATAATAGATATGTAATGGAATGATAAATCCCAACAGTCAAAAAACTTGTTTTTTGGTTGAACACCAACTAATTTAGTTGATTTTATTGTGTCAATCATAGTTGTCAATAAAATTTCATCTATATATATATATATATACCATTAATAATTTATCATTGAATTTTACGAAAAAAAAAACAAAAAGATTCTCTTATTTTTTACCACTGAAGCTTCCAAAAAAAACACACACACACAGACACACACACTATACGAGCCTAATCCAATGCTGCAGGCGGACGTCCGTATGGTGATCCCTTCTCTCTCTCCCTGGCGTTCGCCTACTGTAAACTGTCTTATCATATTCACACGCTACTTTCTGCATTTCAACACTAAACGACGTCGCATCTCCAACATAAATTTCCCAATGACTACACCGTAGTAACTAATAACATTAACAGGTACATACTTTAAACTCATCACAAACAATTAACTGTACTTCTCTCTTTGCTTCGCTTCCCGTTCCTCTTTTACGATAACACAAGGTAGGGTTTCTTTCTCTCTCTTTCTTTCTCTCATGATAATAGTTAGGGTTTACTTTATTCACTGAATTCCCAACACACACAAGTGATTATCCTAATTCTCAATTCAATTTCGGTTTCTTCTTCTCAACTCAGCCTGAGAGAATCGAGA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF08879.13	WRC	19	59	5.50E-15
PF10497.12	zf-4CXXC_R1	206	271	1.80E-07
PF02373.25	JmjC	765	857	1.50E-06

Gene family

Gene family	Subfamily
Transcription Factors Family	WRC
Epigenetic Regulators	JMJ24

Gene Ontology

GO term	Description	Category
GO:0003712	transcription coregulator activity	Molecular Function
GO:0008168	methyltransferase activity	Molecular Function
GO:0032259	methylation	Biological Process
GO:0016020	membrane	Cellular Component
GO:0016491	oxidoreductase activity	Molecular Function

InterPro

InterPro term	Description
IPR018866	Zinc-finger domain of monoamine-oxidase A repressor R1
IPR001841	Zinc finger, RING-type
IPR014977	WRC domain
IPR003347	JmjC domain
IPR045109	Histone demethylase JHDM2-like

trEMBL

trEMBL term	Description
A0A396JX83	_

SwissProt

SwissProt term	Description
JMJ24_ARATH	E3 ubiquitin-protein ligase JMJ24

KEGG

KO	Description	Enzyme
K15601	[histone H3]-dimethyl-L-lysine9 demethylase	[EC: 1.14.11.65]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT1G09060	Zinc finger, RING-type;Transcription factor jumonji/aspartyl beta-hydroxylase
Medicago sativa L.	MsG0080049014.01.T01	_
Oryza sativa L.	LOC_Os03g22540.1	jmjC domain containing protein, expressed
Cucumis sativus L.	Csa013921	_
Glycyrrhiza uralensis Fisch.	Glyur000001s00000082.1	_
Codonopsis lanceolata	Cl_chr03_17860T	_
Arachis hypogaea L.	AH19G18300.2	Lysine-specific demethylase JMJ25 like

Expression pattern