Gene detail

Detail information of Am02G025810.1 Annotation

Gene ID	Annotation
Am02G025810.1	plant glycogenin-like starch initiation protein 6

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am02G025810.1	mRNA	Chr02	161773706	161778709	+

Sequences

CDS:

>Am02G025810.1
ATGAAAGAATGGTTATGGTTGATAATTTTGTTGGTTTCAGTTCATTCACGAATTTGTTTAGGATCAGAGTCTCGGAGAACAGACGTGGCATACGCGAGTCTGTTGTACGGAGATGAATTCTTGTTGGGGGTTAGAGTTCTTGGGAAATCCATACGAGACACTGGATCCAACAAGGATATGGTCGTTTTGGTCTCTGACGGCGTTTCTGATTTTGCCAATAACCTTCTCCAGGCTGATGGGTGGATAGTTGAGAAGATTAGTTTACTGGAAAATCCTAATCAAGTGCGTCCAAAGAGATTCTGGGGTGTCTATACCAAGCTGAAAATATTCAACATGACTGACTACAAGAAAGTTATATACCTTGACGCCGACACTATTGTGGTTAAGAACATTGAAGAGCTTTTCAAATGTAGCAAGTTCTGTGCTAACTTGAAGCATTCTGAGAGATTGAATTCAGGAGTCATGGTGGTGCAGCCATCTACAGCCCTTTTTAATGATATGATGAGCAAAGTAAAAACCCTGCCATCTTACACTGGAGGGGATCAGGGATTTCTCAATTCATACTATTCCGGATTTCCCAATGCACATGTTTTTGAGCCAAATTTGAGCCCAGAAATATTAAATACTAGAACAGTTCCTGAAATGGAGCGACTTTCCACACTTTATAATGCAGATGTTGGTCTTTATATGCTGGCTAACAAGTGGATGGTAGATGAGAATGAACTCCGTGTGATTCATTATACGCTTGGTCCTCTTAAGCCATGGGACTGGTGGACATCTTGGCTTTTGAAACCTGTTGATGTTTGGCAGAATGTAAGGGAACAGCTACATGAATCCCTTCCTGGAACGGGAGGGGGCCGAAATCCTAAAGATGATTTTCTTGTGAAGTTTCTTTTTCTGCTACCAATTTGTGCTGTACTCTTCTGCTGTTATCGTTCATTTTTAAAGAATCAAGGGTACTTCGGTTCCTGCAGTAGAAGCATATTATGTGATAATGTCAGACACCTTTATTATAGGATTAAATCAGGCAGCCTACTTTCATATACAGGCATTTCTACTTCTATCAATTCCACCCATCAGCTCTTAAATGGTACTCAAAACAAGGTGCCCACATATTTGGGTGGCGTTTCTGTTTGTGTCTGTTTTATGGCTGCAATGGTGTCTCTTGGACTAGCTCTCTTGATTGTACCTCGGCAAGTGACTCCGTGGACTGGTTTGATTTTGATGTATGAATGGACATTCACAATCTACTTTATAGTATTTGGAGGTTATCTCAATTTGATTAATCATTGGGGGAAGATCATGGCCTCACGATCTCCTTCCTCTTTGTCTCATGATGATGATTCTGGAAAAGTCCATCAGTGTCAGATATCATCTTGTGATGCTGCTACATGGTTCTATGGATTAAGGATAGCCTTCTTGGCCATTGTCGCTCCATCTCTGCCTTGTCTTTTTGGAATTACCGCCTTGTTTCTACGGTTAGGTTTGATGGTTGTTGGGGGAATAATATTAACATCTTTCATGACATACGCCTCTGAACATCTTGCTATCAGATCATTTCTGAAAGGCCTTGAAGAGAGGGTTATTGCGCGAAATGGGAACTTCTGCTGA

Protein:

Promoter(3k):

>AM02G025810.1
ATTCGTATGTGCGACAGAAAAATATAAAATGTATAAAATATATTTGTGTAGTTATAATTTTTATGAAATTTATTGTCGAAAAAAATATTATTTGGCATGCTAAAATCTACTGAATAATTGGTTCAATTCTCTGTATATAATCTGATTTTTTATTTATTTTTAAAGAACATAAGAATTGAAATAATATATAATCGATCAAAAGAATGAAAAAAATTAGAATTGCGTAAAATATAGTGTCTGATGTGTAAAGTGTACGTTGACATGGAGAGAATCATGATTATCACTCAGATATTGTTTGTAAAAATGAAGTACATCAGAATTTTTCAAGACGAAAATAGCGGCACCGGTATGATCAGAAACCCTTAGTTGAGGACCATCTCTATAAATCAAATCAAATAACAGATTTAAAAACCAAAAAATAAATCAAATAAAGAACCTATCAAAATCGAATTTGAGAGAATAGATAATTACCCGCCAATAGCAACAAACTCAGCAATGGTAGCCAGCACGATGAAACTACAATCCTGTTCATAGACGAAAACGATGAATTAGCAACAGTAGTAGCCAAAAGTAGTAAATAAGTTAAACAAAAAAGTGATTTATACATCATTTTGATGATGATTGAGACCAGATAGGGTTATGTTATCATTGAAAAACAAAAACTCATCAAATTGTTTCCCCTTAAACCCGTATTGATCAAGAAATATATGATGAAATTAGATGGGTGACGTTTTGCGTGTTTTAGTATTAGGAGTGACTATATTTATAGTTAAAATTAGGGTTAATATAGGAGGGAAAACTATGATGGAATTGAAATTTGAACTTTTTAAAATTGGTGGGAATTTGTATTTCAACTTGAAAATTGAATCTTTTGGTTCATAGAAATAGAAATATAATTTCCGAATTTGGTGGGTGTTACGTTTACTATTACAGCAAGGTATTGATTATTGCCAATATATATGGAATACGTTTACTATTAATTGCCTAAATATTTAGTTATATGAATCTAATACAACAGTTGTATAAATCCAACGGATGAGACTTATATATCAAGATCCAATGGTCTCATTCATTTCTGTTATTTAATTTCAATGTGGACCAATTGTAAAACGCCATGTAGGATGACTACTGAACATGAGCATTGAAATTTTTTCCCAAAAAACGTGGTGGTGATGACACCTAGGAAAGAGGTGCTTTGAGGTACCTATGAATTTGTATTTTAAATAGATAGTACTCTGTTTGTAAGGATAGACACAAATACCAAACCGAAACCAGGAAGCACTAAATGGTAATAACTGCAAACCAGTAATTGTATTATCAATAGTTAACTAGTCAAGTTATGCACTTTGTTTTTCACAATCAAGTCATGCACTTAAATCAACAATAACTGTATCAGTTAACATAACATCGAGACACTCAGTTTTCAAATGTATTCCTAACTATGAAACAAAGAGTCGGGCCAGGGCCGACCCAACACCATTTAGGGCCTAAAGCGAACTCCGATAAGAAATCTTTTTAAAAGTAGTAGTTGTAATAATAATAATAAATATTTTTTTAAGAACGGCCATTATTTGCTTCAAAAAAAAACTAAATGATTTTTATATAAAAATGATTTTTAAATCTATAAAAAATTAACTTTTGATCTAAATTATTAAAATAAAAAATAGTACCATAAATAATAATTTTTTTAAAAAAAACCATAAATAATATTTTTTAAAAAATAAAATCAAAGTCCCTTTTTGAATCTGAAATAAAAAATTTATGCTTATTCAATTGTATTTAATTAAAATTTTATTTAGTATCGGTTAATTTAAATTTAAAGAAAATTAGAGATAAGTCACATATGACCCATTAGCTACTAGTGGGAACATAGCTCATTTGTCTTTAAAAAAAGGAACATGGCCCAAAATCATTGTTGGAACTTGGAGCTAAAATGAAGGATAAAAAGCAGAAATTGAAGTTAAAAAAATCTTAAAAGACTCTGAGATTCAAACCTGCAATCAAGTGTCTACAGACAATGAGCAACAACCAGTTGCGCTGCGAAATTTCATATTGCAATATGATACATTCAATATATATAGTTTTCATGTAAGGCATTTTTTTAGGGTACGGCCATTTGTTTTGGGTGAGGCCTAAAGCAAGGGTTTTACCCACCCTAACCATTGAGCCGACCCTGAGTCAGACACGAATTCTGGAAATGATATGGATATCGAGAAATAACTAATATCCAAAATATTGGACTCTTAGATACCACATTTATATAAGTAATTACAAAGATAACTAAATCAATAAACACAAACACATATAGGTTGAACTTGTAAATAATATAAATTGAGAATTAGGATTTATCTATTCACCTCTTAAAAACAATGTTGATAAACTTTACAAGGGTTTTTTATGATAAAAAGTTTTATATCCTAAGAATAAGTCTAACAATTTAATAATTTTAAAAAGTTGATTTTTTCTTAACCGACAAAAGTGTTTGAGAGGTGTCTAAACAAAATCTAAGAGGTGTCTAAGTCAAAAAAGATATTTTTTAAACGCAACAGTGTACTGAGCCCAATCTAACTTAACATGATTTTTTTCCCACTCCCCGTTTCCACGTACTCTCTCACTCCCCACACATTCGGTATCTAGATACCGAGTGACAAAATTAGTCACTCAGTACCAAAGTAGAGTGAGGAGTGAGAGAGTGGAAAAAGAATTTCCCTAAAACACGAATCTATTGGACCAGCTCATTAGCCCATTAGGCCTACCGAAATTGATACCTCTAATCAAATTAAATTTCTAAATACACCTCCTTAACGGAAGTTATTCGTAGTTTTCTTTGGCCACTCACTGTGCAATGGAAACTTGAAATCACAGCGGAGGAGGCATCGTATTTTCCGTGGACTACGCTACAGAGGATCAGAGAGAAGTGTTCTTCTGCGTTCAGGGACGAGTGAGTGAGTGAGTGTGTGGGAAAATTCAAATTCGAGAAGACAAAATTTTCTCGAGATA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF01501.23	Glyco_transf_8	90	136	9.70E-11

Gene family

Gene family	Subfamily
Carbohydrate-Active enzymes Family	GT8

Gene Ontology

GO term	Description	Category
GO:0005794	Golgi apparatus	Cellular Component
GO:0009555	pollen development	Biological Process
GO:0006673	inositol phosphoceramide metabolic process	Biological Process
GO:0003779	actin binding	Molecular Function
GO:0046513	ceramide biosynthetic process	Biological Process

InterPro

InterPro term	Description
IPR029044	Nucleotide-diphospho-sugar transferases
IPR002495	Glycosyl transferase, family 8

trEMBL

trEMBL term	Description
G7I6U5	_

SwissProt

SwissProt term	Description
GUX6_ARATH	Inositol phosphorylceramide glucuronosyltransferase 1

KEGG

KO	Description	Enzyme
K22809	inositol phosphorylceramide glucuronosyltransferase 1	[EC: 2.4.1.-]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G18480	plant glycogenin-like starch initiation protein 6
Medicago sativa L.	MsG0180004468.01.T01	_
Oryza sativa L.	LOC_Os02g41520.1	glycosyl transferase 8 domain containing protein, putative, expressed
Cucumis sativus L.	Csa012306	_
Glycyrrhiza uralensis Fisch.	Glyur000934s00021592.2	_
Codonopsis lanceolata	Cl_chr07_17820T	_
Arachis hypogaea L.	AH06G08530.1	Inositol phosphorylceramide glucuronosyltransferase 1 like

Expression pattern