Gene detail

Detail information of Am02G025780.1 Annotation

Gene ID	Annotation
Am02G025780.1	P-loop containing nucleoside triphosphate hydrolases superfamily protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am02G025780.1	mRNA	Chr02	161675224	161717308	-

Sequences

CDS:

>Am02G025780.1
ATGGAGGGAATAACTGAGGATGAGGTGGTTGATATTGAGAGTGCTTCTGGTGGTTCTGTCAATGACAATTCAGACGATGAGGGATCTCTGCCTTCTGAAATTGATGACAAATTGCATCTTGAGGAACCTCTCACTGAGGCTGAAATAGAAGACCTTATTTCTGAGTTGTTAGAAGTTGAGAGTAAGGCTGCAGAGGCCCAAGAAACTCTGGAAGAGGAGTCTCTTGCTAAAGTGGAGAGTGAAGTTAGACAAGAATTGAAGCAAACTCTACAAGGGGATGATCTCGAAGCTGCCGTTGCTGATGAGATGACTACTTTTAAAGAAGAGTGGGAAGCTGTTCTGGATGACCTTGAAACTGAAAGTGCCCACTTACTGGAACAACTTGATGGGGCTGGAATTGAGCTCCCAAGCCTTTATAAGTGGATTGAAAGAGAAGCTCCCAATGGTTGTTGCACTGAAGCATGGAAAAAGAGAAATCATTGGGTTGGGACTCAGGCAACTGCTGATATTGCTTCTTCAATTTCTGATGCTGAGAAATATCTACAGATAAACAGACCTGTTAGAAGGCGACATGGCAAATTACTGGAAGAGGGTGCTAGTGGTTTTCTCCAAAAAAAACTTTGTGAGGAAACCCAGGAGCCTGGAAAAAAGGAAATTGAGGGGGACTGGGATGTCTTCAATAAAATAGTTTCTGAAGGGAGTGGTATTGATGCTACATTTGGCAGTAAGACCTGGGCTTCTGTTTACTTGGCCAGCACTCCACAGCAAGCTGCCCTGATGGGACTTGAATTTCCCGGAGTTAATGAGGTGGAGGAAATTGATGATGTTGATGGCAATTCTACGGATCCATTTGTTGCAGCTGCCATTGCAAATGAAAGACAACTAGATCTTTCTGATGAGCAAAGGAGACAGTTTAAAAAGGTCAAAGAAGAGGATGATGCTAACGTTGATAGAAAGCTTCAAATTCGTTTGAAACATCGGAGGCACCGAAAGAAAAGTAAACAGGAAGAAACTGGTGATGATGTGGAAATTGTGTCTGAAAATAACAAGGCTGCAAGTCTGAATATGGAGGCCGATAAAATAAAAGGTTTTGATGTAGAAATGTCTATGAGACCCGGTGAATTGTCAGAACCACCAAAATCTTCATTTGATGATGTTATTGAGCACAGAGGAACCAAGCGTCTAAACGATGATGAACTTGATACTGATAACAAAAAGTGCCGGACTGTTATCATCAACAGTGATGATGAAGCGCATGATTCGGATGATTCTGGTAGCGAATCAGATAATTCAGATAATTCAGATGATTCGGATGATTCAGGTTCAGAGATAAATGTTGCAGTCAGCTCTAAACGAAGGCGCAAAAAAAAGATCAGGAGGATACTTGATGATACTGAATTAGGAGAGGAGACGAAAAAGAAAATAGCAATCGAAAAGGAACGTCAGGAACGCCTGAAGTCTTTGAGAGGGCAGTTTTCTACCTCATCAATTGATAATAGCTCTGCTGGCTGTAATGGGAATTCATCTGAAGGTGCAGGTGTTGAAATTCTTGGTGATGCGCTGGCAGGTTATATAGTGAATGTTGTGAGGGAGAAAGGTGAAGAAGCAGTCAGAATTCCTCCTAGCATTTCAGCTAAACTGAAAGCCCATCAGATTACTGGAATAAGATTCATGTGGGAAAATATAATACAGTCAATCCGAAAAGTAAAGTCTGGGGATAAAGGTCTAGGGTGTATTCTAGCTCATACCATGGGCCTTGGCAAAACATTGCAGGTAATAGCTTTCTTGTACACTGCAATGAGAAGTGTTGATTTGGGATTGAGAACTGCACTTATAGTCACACCTGTCAATGTGCTACATAATTGGCGGGTGGAGTTCATCAAATGGGCACCATCAGAATTAAAGCCACTCAGGATCTTCATGCTAGAAGATGTATTGAGAGATAGGAGGGCACAATTGCTAGCCAAATGGAGAGCTAAAGGTGGTGTATTCTTAATTGGCTATACTGCTTTCCGGAATTTGTCTTTTGGAAAGCACGTGAAAGACCGGGACACGGCCAGAGAAATTTGCCATGCTTTGCAGGACGGACCCGACATTCTTGTTTGCGATGAAGCTCATATGATTAAAAATACTAAGGCAGATGTTACCCATGCCTTGAAACAAGTAAAATGCCAGAGAAGAATTGCACTTACCGGATCGCCTCTTCAAAACAATCTCATGGAATATTACTGTATGGTTGATTTTGTACGAGAAGGTTTTCTTGGAAGCAGTCATGAATTTAGAAACCGCTTCCAAAATCCTATAGAGAATGGTCAACATACCAATTCAACTATGATTGATGTGAAAATAATGAACCAAAGGTCACACATTCTCTATGAACAGTTAAAGGGTTTTGTCCAAAGAATGGACATGAATGTTGTGAAGAAGGATCTACCGCCTAAAACAGTCTTTGTCATAACAGTCAAGCTTTCTCCCCTGCAAAGGCAACTCTATAAGAGATTCCTTGATGTACACGGATTTACAAATGTCAGGGAGCCTCATGAAAATTTAAGAAAGAGAAGCTTTTTTGCTGGGTACCAGGCATTGGCTCGGATATGGAACCATCCTGGGATCTTGCAATTGACAAAAGAAGAAAAGGACTACGCAAGACATGAAGATACTGTTGAGAATTTTCTTGTCGATGATATCTCCAGTGAAGAAAATTCCGATTCTAATGTGCTTGCTGGAGAGAAGTTGAGGCATACGAATGATTTTCTGCAAAGGAAGGATGGTAATGGCTTTTTCATAAAGGGTTGGTGGAAAGATCTTCTTCATGGAAAAATTTATAAAGAGGTTGAACAAAGTGGCAAAATGGTTTTGTTGATAGATATACTTACGATGAGTTCTGCAGTGGGTGATAAGGTGTTAGTTTTTAGTCAGAGCATTCCAACCCTAGACCTCATAGAACTTTATCTATCAAGGCTACCTAGACATGGAAAACGAGGGAAGTGTTGGAAGAAGGGAAAAGATTGGTATAGGCTGGATGGAAGGACAGAGAGCTCAGAAAGGCAGAAGCTTGTTGAGAAATTTAATGACACTTTGAATAGGAGGGTAAAATGCACACTGATTTCAACTAGAGCAGGCTCTTTGGGTATTAATCTTCATGCAGCTAACCGTGTTGTTATAGTTGATGGTTCGTGGAATCCAACATATGATCTCCAGGCTATCTATCGATCTTGGAGGTATGGGCAGAAAAAACCAGTATTTGCTTATCGATTGCTGGCTCATGGAACTATGGAAGAGAAAATATACAAGCGCCAGGTAACGAAGGAGGGGCTTGCTGCTAGAGTGGTTGACAGACAACAGGTTCATAGGACCATATCTAAAGAAGAAATGCTGCACCTCTTTGAGTTTGGTGATGATGAGAACCCTGAGACTTTGGCCGAACTGAGTCAAGAAAATGGTCTTACTTGTGATTCACTGAAAGATACAATACCACATTCAAACGGAAGCAGTAATTCTGATAAGTTAATGGAAAGCTTACTTAGCAAGCATCATCCCCGGTGGATTGCCAATTATCATGAACATGAAACCCTGTTACAAGAAAATGAAGACGAAAAACTATCAAAAGAGGAGCAAGATATGGCTTGGGAGGTGTATCGCAAATCACTGGAATGGGAAGAAGTGCAGAGAGTTCCAATTGGTGAGTCTATGCCTGATCAAAAGCCAGAAATTCCAAAGGAAAAGCCCCATGTATCAAAAAAACCCTACGTTTTGCCAACTAAGCTAGCCAATCGTTTCACGACACGGAAATGTACCAACCTTGCGCACTTGCTGACACTCAGAAGTCAGGGAAAAAGAAGTACAGTCTGTGGGGAATGTGCCCAGGAGATAACATGGGAAGACTTGAAGAGTAAAAAATAG

Protein:

>Am02G025780.1
MEGITEDEVVDIESASGGSVNDNSDDEGSLPSEIDDKLHLEEPLTEAEIEDLISELLEVESKAAEAQETLEEESLAKVESEVRQELKQTLQGDDLEAAVADEMTTFKEEWEAVLDDLETESAHLLEQLDGAGIELPSLYKWIEREAPNGCCTEAWKKRNHWVGTQATADIASSISDAEKYLQINRPVRRRHGKLLEEGASGFLQKKLCEETQEPGKKEIEGDWDVFNKIVSEGSGIDATFGSKTWASVYLASTPQQAALMGLEFPGVNEVEEIDDVDGNSTDPFVAAAIANERQLDLSDEQRRQFKKVKEEDDANVDRKLQIRLKHRRHRKKSKQEETGDDVEIVSENNKAASLNMEADKIKGFDVEMSMRPGELSEPPKSSFDDVIEHRGTKRLNDDELDTDNKKCRTVIINSDDEAHDSDDSGSESDNSDNSDDSDDSGSEINVAVSSKRRRKKKIRRILDDTELGEETKKKIAIEKERQERLKSLRGQFSTSSIDNSSAGCNGNSSEGAGVEILGDALAGYIVNVVREKGEEAVRIPPSISAKLKAHQITGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTLQVIAFLYTAMRSVDLGLRTALIVTPVNVLHNWRVEFIKWAPSELKPLRIFMLEDVLRDRRAQLLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRDTAREICHALQDGPDILVCDEAHMIKNTKADVTHALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTMIDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRQLYKRFLDVHGFTNVREPHENLRKRSFFAGYQALARIWNHPGILQLTKEEKDYARHEDTVENFLVDDISSEENSDSNVLAGEKLRHTNDFLQRKDGNGFFIKGWWKDLLHGKIYKEVEQSGKMVLLIDILTMSSAVGDKVLVFSQSIPTLDLIELYLSRLPRHGKRGKCWKKGKDWYRLDGRTESSERQKLVEKFNDTLNRRVKCTLISTRAGSLGINLHAANRVVIVDGSWNPTYDLQAIYRSWRYGQKKPVFAYRLLAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPETLAELSQENGLTCDSLKDTIPHSNGSSNSDKLMESLLSKHHPRWIANYHEHETLLQENEDEKLSKEEQDMAWEVYRKSLEWEEVQRVPIGESMPDQKPEIPKEKPHVSKKPYVLPTKLANRFTTRKCTNLAHLLTLRSQGKRSTVCGECAQEITWEDLKSKK*

Promoter(3k):

>AM02G025780.1
TCACCGGTGAAAGATTTGATTTACTCTCTCACCCTAGAAGGACCCTATATTATATTCAATTTGATTAAATTTATTTTTCATTAAATATTTCCAAGGAAAAATGAAAATGAAAAAACTAGATTTTTTTAAAAGGGTATATTAAGGAAAAAGGAAAAAATATTTTATTAAATTATCTTTTACTATTTATGTTCAATTTGACTAAAATAAGAAAACAAATTAAAACTCTTGTTGAAAATATTGTTGAAAATACATTGGGATCAGTCAGTCTCAGCTGGGAGCAGGTTTCATTCGACGCGACGGTATGAATACACCGCAACGCAACTTTATAAAACAAAAAAGTTTTCGTCTCTTATGTAACGATTTTTGTAGCCTCTCACTCCCTCCCTCCACTTCAGGCGGGTTACGAATACCTCTTTAAATACCACCAACGGAAGCAGCGTCATATAGAACGATCATTTCTTTCTCTTTTGTTCAGTGCCCTTGTTTCGAAAGAAGCTTGCTATCGAAGTTCTTCTCTCTCTACGAAAACCTAAAGATCCAGAAGCTATTATTACAAACCACAGCCGTAGCTTCTTATCGGCTATTGAGGTACTACGCTTCATTCTTATTTCGATTAAGAATTTTTACTTTTGATCGGAAAATTGCTTCGCGGTTGATTTCACGCATTGCAGATTCTCTCAACAAATTAGTTTACTGTTACGTCATTGTATGTATGAATAATTGTTGCAGTGTTAGTTAATTGCTGCTCAAATTAATAAAACCTAACTAGTTTGGTATTCACTCCCGATCGCTGAACTAAATTAGTGCCGTTATTGTTTAGTAGTGAGCGAACACGTGTATACAGAACATGACGATTTTTTTGTTATTAAATTTCTGCACTATTTTTCTTTCATTGCTGAGTGAGGTGAACTAAATTCTAATGAAGAAGCTTATATTATAGTGACTAGATTTAGTTATATGAGTTTTTTCGTTTACCAGTCACAGAGTCACTCATTGCTTGTTTTGGTCATTGATTCTGGCATGTCTTAATTATCAACAATTGTCTTTGTTTTACTAGTTGTAGGGTCATCCTTAACGTTTACATTGGGTGCTAATGCTATCTGCTACTGCTTATCTTACATTTGGCTGTACTACTACTCAAATTAGATATGATTCCATTTTGTTTAATTTTTTTTTGCTGGTTTTGAAAAAGCTGCGTAATTTTGCGGATTTGGCACAAAACATTAAAGTTGATCTTAATAGCAAGGTGATGCTATTTATTAAAGGTTCCATCTTTTCTGTGCTAGTGAATACATATTTATGGAGCCAATCCTTGATGAACAAGATAGAATATTCTGATTCTGATATATAATTTTGTAGGACTTGATGGATTTTTATCAATTAAGGAATGCCTAGTAAATTAGATTGTCAGAATGACTCGAACCTTGTTCATAAACACTTGAATGCTCAGTTAAGCAATCTAAATATATATATATATATATATATATATATATATATATATATTTCTTTATGAAATGCTTTCTAGTTCTAGTAATATCACGAGTTATGGATTTGTGGTTGTGGGGGCACCGGTTTTAGATGACCAAAACAAATAATGCCTAGATTCTTCATGAGAGCTCATTTAGGTTATTGTATACTACTCCACTATTGGTGTATTTGTTTAAAATTGTGAATATTGTTTTTTCATTTTTGGGCTGTGTGACTCAAATAAGTAAATAGTAAAAGGGTTTTTTGTGTGTCGATTAGGTCTATGAAGATTAAAAGTGTCATGTTCGTTGACAAGGCAATTGACTTGTGACTTCAGCCTTGTCCCTTTTAAAGAACAAGGCCAGTAGGGAAAAAAGGGTCCAAAATGGATTAGGTTAGGTCTATGAAGATTAAAAGTGTCATGTTGTTCGTTGACAAGTCAATTGACTTGTGACTTCAGCCTTGTCCCTTTTAAAGAACAAGGCCAGTAGGGAAAAAAAGGGTCCAAAATGCATTAGGTTAGGTCTATGAAGATTAAAAGTGTCATGTTGTTCGTTGACAAGTCAATTGACTTGTGACTTCAGCCTTGTCCCTTTTAAAGAACAAGGCCAGTATGGAAAAAAAGGGTTCAAAATGCATTAGGTTACTGTATCTTGCTTATCTATTAAGGGGAGAAAGAATATCTCCAGCCGTGATCGTATTATTTCAAAAAAATATTTGATACTGTTTGTTTTATTATCGGTAAATTACTCTCAACGTCTTTTAACTTAATTTAAACTTTTGAATTTGTTCTTTATTTATTTTCCCTTGAATTGGTCCTTTAGGTTTTAAGTTGTTTTCACCATCAGCCTATTTTAAACATTTTGTTAACAAAAACTGCCTATGTGAGTGTTGCATACATGACTTGTATGTCTACATGTATTCATCTTCCCTCATGACTTGATGATGTGTATTCATCTTTATCCCCTTGCTCTAACAAAACCATAGATTTACGATCGTTAAATTTGTCGCATCCATGACTCCATTTTGCAGTAATCCTTCAAATTCTTGCAGCTGTAACCCTAAATTTGAAGGATTATTGCGAAATGAAGCCATGTATGTGACAAATTTGGTGACTGTAAATCTAAGATTTTTTTAGGGGAAGGGGAAGAAAATGAACACATCATCAAGTAATGCCGGGGAAGAAGATGAAGACACATTGACTTTCAGGTCATGCATGCAACGACCACATATGCATTTTGTTAGCGGAAGGTAACTTGACATCTAAAAAAGAGTGACACTGCAAACAATTTGAAACATAAAGGACTAATTTGAAAAAAAAGAATATAAACGACCAATTTGAAATTTGGAATTAAGCTAAAAGACCCCAAACGTAATTTTGCCTTTATTATTCACTGCTGGTGTACTTTTTCTCCACCCTTTAGCTGGTCTTTTTTTGATTCTCAGAGAAGGTTGTACATTACATATATATTTTATCCAATTTAACATGTACTTTGAATGGTTGCTTGTCCTCTTCAGTAACTTTTACAAGAG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00176.26	SNF2-rel_dom	569	871	2.60E-57
PF00271.34	Helicase_C	952	1076	5.00E-15
PF04851.18	ResIII	560	734	3.00E-08

Gene family

Gene family	Subfamily
Transcription Factors Family	Others
Epigenetic Regulators	CHR20
Transcription Factors Family	SNF2

Gene Ontology

GO term	Description	Category
GO:0005634	nucleus	Cellular Component
GO:0016887	ATP hydrolysis activity	Molecular Function
GO:0010558	negative regulation of macromolecule biosynthetic process	Biological Process
GO:0005524	ATP binding	Molecular Function
GO:0046872	metal ion binding	Molecular Function

InterPro

InterPro term	Description
IPR038718	SNF2-like, N-terminal domain superfamily
IPR000330	SNF2, N-terminal
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR001650	Helicase, C-terminal
IPR014001	Helicase superfamily 1/2, ATP-binding domain
IPR044574	ATPase ARIP4-like

trEMBL

trEMBL term	Description
A0A9D4WAQ4	_

SwissProt

SwissProt term	Description
CHR20_ARATH	Protein CHROMATIN REMODELING 20

KEGG

KO	Description	Enzyme
K10779	transcriptional regulator ATRX

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT1G08600	P-loop containing nucleoside triphosphate hydrolases superfamily protein
Medicago sativa L.	MsG0180004465.01.T01	_
Oryza sativa L.	ChrUn.fgenesh.mRNA.85	expressed protein
Cucumis sativus L.	Csa012309	_
Glycyrrhiza uralensis Fisch.	Glyur000578s00020997.1	_
Codonopsis lanceolata	Cl_chr07_18330T	_
Arachis hypogaea L.	AH19G20900.1	Protein CHROMATIN REMODELING 20 like

Expression pattern