Detail information of Am02G025520.1 Annotation
Gene IDAnnotation
Am02G025520.1 Vps52 / Sac2 family
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am02G025520.1mRNAChr02160746741160758594+

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF04129.15Vps52795781.80E-202
PF09763.12Sec3_C663871.10E-11
Gene family
Gene familySubfamily
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Gene Ontology
GO termDescriptionCategory
GO:0042147retrograde transport, endosome to GolgiBiological Process
GO:0004054arginine kinase activityMolecular Function
GO:0015031protein transportBiological Process
GO:0005829cytosolCellular Component
GO:0016020membraneCellular Component

InterPro
InterPro termDescription
IPR007258Vps52
IPR016159Cullin repeat-like-containing domain superfamily

trEMBL
trEMBL termDescription
A0A1S3E2F7 _

SwissProt
SwissProt termDescription
VP52A_ARATHVacuolar protein sorting-associated protein 52 A

KEGG
KODescriptionEnzyme
K20298vacuolar protein sorting-associated protein 52

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT1G71270 Vps52 / Sac2 family
Medicago sativa L.MsG0180004437.01.T01 _
Oryza sativa L.LOC_Os03g30460.1vacuolar protein sorting-associated protein 52, putative, expressed
Cucumis sativus L.Csa005916 _
Glycyrrhiza uralensis Fisch.Glyur000542s00017555.2 _
Codonopsis lanceolataCl_chr07_18620T _
Arachis hypogaea L.AH16G39330.1Vacuolar protein sorting-associated protein 52 A like

Expression pattern