Gene detail

Detail information of Am02G025130.1 Annotation

Gene ID	Annotation
Am02G025130.1	Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am02G025130.1	mRNA	Chr02	159597976	159609021	-

Sequences

CDS:

>Am02G025130.1
ATGGGGACTGAACTTATGAGAATATGTCTTAAAGAAGATAATGATGATTTTCCATCAGTTCCACCAGGTTTCGAGTCATATACAGCTTTCTCACTGAAGAGGGTAGAAGACAATGAGAAACAAAACGTTACAAATTTGACCAGTTGCTCTACTAGTGCTTCTGAATCACAGTCAACTCAGGTCGGAAATGATGCTCAATTTCGTGATACTGCGAAGGTTCCTAGATCCCTTCGACGAAGACCATGGATTAACCATGGACAACATGAGAACGGTCCAGAGGAAAACTCTGATTGTGAACAGCTTGATCAAAATTTCCCCTCAAGACCTTGTCTACCTAAAGGAGTCATCCGTGGATGTCCAGATTGCAATAATTGCCAAAAGGTCATTGCCAGATGGCGTCCAGAAGATACTTGTAGGCCAAATATCGAGGATGCTCCTGTTTTCTACCCCACTGAAGAGGAGTTTGAAGATACTTTGAAATATATATCAAGCATTCGCTCCAGAGCTGAACAATATGGAATTTGTCGTATTGTTCCTCCGCCTTCTTGGAAACCTCCTTGTCCTCTCAAGGAAAAAAGTATATGGGAGGGTTCTAAATTTGCTACTCGTGTCCAGAGGATTGACAAACTTCAGAATCGTGGTTCAGGAAGAAAGATGCCAATCATTCAAAATAATATGAAAAGGAAAAGGAGAAGATGCTCAAGAATGGGAGAGGATAATGGCACTATAACAGGACCTAATGCAGCCTTTTGTGAAGTTGAAAGGTTTGGATTTGAACCTGGTCCAGAATTTTCCTTGGAAACTTTTCAGAGATATGCAGATGATTTTAAGGTCAAATACTTCAGAAATGAGAACATATCTCATTTGAGTGATAATACAACAATTTTAAATGGTACCTCGGAGCCTTCTTTGGAGACCATTGAGGGTGAATACTGGCGGATGGTCGAGAATCCTACTGAAGAAATTGAGGTGCTTTATGGAGCTGATCTGGAAACAGGGGTTTTTGGGAGTGGTTTTCCTAGCAAGTCTAGCCATGTTGCTGCTTCACATGAACAGTACATAAAGTCTGGCTGGAATTTAAATAACTTTGCTAGGTTACCTGGCTCTCTGCTATCTTATGAGACCAGTGATATATCTGGTGTTCTAGTGCCATGGTTGTATATAGGAATGTGCTTTTCCTCTTTTTGTTGGCATGTGGAAGACCACCATTTATATTCATTAAATTATATGCATTGGGGTGCTCCAAAAATGTGGTATGGAGTCCCTGGAAAAGATGCATGCAAATTGGAAGAAGCCATGAGAAAGCATTTACCTGGACTTTTTGAAGAGCAACCTGACTTGCTTCACAAGCTGGTCACACAGCTTTCTCCTTCTATTCTCAAGTCTAAAGGTGTACCAGTTTATAGGTGTGTCCAAAACCCAGGGGACTTCGTTTTGACATTTCCTCGAGCCTACCACTCTGGGTTCAATTGTGGCTTCAACTGTGCCGAGGCTGTTAATGTAGCTCCTGTTGACTGGCTGCCACATGGGAATACTGCTATAGAGCTGTACCGGGAGCAGGGGCGCAGGACTTCTATATCCCACGATAAGCTGCTACTTGGGGCTGCTAGGGAAGCAGTTCGCGCTCAATGGGAGCTTAATTTGCTGAAGAAAAACACTTCAAATAATCTAAAATGGAAAGATGTATGTGGAAAGGATGGTCTTTTGGCAAAAGCACTCAAGACACGCGTTGAGATGGAGCGAGTAAGAAGGGAATTTCTCTGCAGATCTTCACGGGCATTAAAAATGGAGAGTAGTTTTGATGCTAAAAGTGAAAGGGAATGCGGAATTTGCTTTTTTGATTTACACCTATCTGCTGCTGGTTGTCACTGTTCCCCAGATAGATATGCTTGCTTGAATCATGCAAAGCAATTTTGTTCATGCTCTTGGGATTCCAGGTTTTTCCTCTTTCGGTATGATATTAGCGAACTAAAGATACTTGTGGAGGCATTGGAAGGAAAATTAAGTGCAGTATACAGATGGGCAAAATCAGATCTTGGGCTGGCACTAAGTTCTTACATCTCAGTAGATAAAGAACCAAAAAGATTGTATCCATCCAACTTGTCTCATTCTTCTAGAGCCACTGTGAATAAAGAGGTGGCTTTGCATCCATCGAATAAATTTATGGAAGATTCTAAATTGCTTGATGTTCCTGTAGTGGATCAAGCAAATTCAGTTAATAACAAGGATCAGGGCCATCCTAAACAAAGGAAATCAGCGGCAGTTGTGTCTTCTTCGAGTCACACAAAGGAACCGTCAACATTTAATACGTCAAAACCTACACGTGAGATGGCTAATCGTAAGGTCCATGCTAATAAAGAAGCAGCTATTTGCAGATCAAAGCCGATAACCCCCAGGTGTCAGTTATCTCAAGAGGATACATCATTTGTTTTAGCTCTGCCTGTACCTCAACAGGGTAGTGAGAAAAGTTCACTTTGCAGACGTAAGAATATCATACTTCTTAGTGACGACGAAGATGATGAAATGAAGATGCCAGATTCAAATAGAGGGAAGGAACTTCCTCATATGCCTGCAGGAGCTAAAAATAAAGCAAGCCTTTGTAATAATATAGAAAATACAAGCTTGACCATCCCTGTGACAGATGCTGCTGCAATGGGTGAAAAGGATGGTATTACATTGCCCCATGAAGATATGAGTTCGAATTTAACTCAGCCTTTGCATGTGAAACAAGAGTATCATGAACAAAGAGGACCAGTTCTACCTTCTACCCCAGCGGATCTTTCTTTACATATAGGTCTTACTACTGCAGAATCAGTTAAAAACATCCCAGCTTCTTCAAAAGTAGAGGCCAGCGGTCATCGTTTGGAAAGTTTGGAGGTTTGTCCTCTGAGCCCCCAACATTCTGGCCTTGCCAAGGTTAAGAAAGAGGAAAATCATGAGAAAATTGGAGGATGTTCCACTGTTAATGGAAACATCTCTTGCGGTCTAAACCGTCAGAAAGGTCCTCGTATTGCAAAGGTTGTCCGGCGTATCAACTGCAATGTTGAATCTTTAGAATTTGGAGTTGTGCTTTCTGGAAAGTCATGGTGCAGCAGTCGGGCTATATATCCAAAGGGGTTTAGAAGCCGTGTTAAATACATAAATGTCGTGGATCCATCCAGTATGTGTTACTATATTTCAGAAATTCTCGACGCTGGACGTGGTTGCCCTCTATTTATGGTTTCCTTAGAAAGTTGTCCAAGTGAGGTCTTCATTCATATGTCAGCAACAAAATGCTGGGAAATGGTAAGAGAGAGAGTGAATCAAGAGATCGCAAAACAACATAAGCTGGGAAGAAAGGCTCTTCCTCCTTTACAACCTCCTGGCAGCCTTGATGGCTTCGAAATGTTTGGGTTTTCTTCACCAGCAATAGTGCAGGCTATTGAGGCACTGGATCGAAGTCGAGTTTGTAATGAATATTGGGACTCCAGGCCCTTCTCTCGGCCTCAAGGGCAGAATTCACAACCTTACCAAACCAATGTGAAGGGTGGAGGTGGAAATGATCAAGGGGCTCCCATGAGTCAGGGCACGCCTGTTGGAGACGTTGCAGTTCTAAGGAGCCTATTTAAAAAGGCTAATGCAGAAGAATTGAACTCATTATACAGCATTCTTAGTGACACTAAGCCGGCGGCAGACCGGGCCCCAATTGCGCAACTTCTCTATGAAGAGATCCACAAATCCCAACCACCCTAG

Protein:

>Am02G025130.1
MGTELMRICLKEDNDDFPSVPPGFESYTAFSLKRVEDNEKQNVTNLTSCSTSASESQSTQVGNDAQFRDTAKVPRSLRRRPWINHGQHENGPEENSDCEQLDQNFPSRPCLPKGVIRGCPDCNNCQKVIARWRPEDTCRPNIEDAPVFYPTEEEFEDTLKYISSIRSRAEQYGICRIVPPPSWKPPCPLKEKSIWEGSKFATRVQRIDKLQNRGSGRKMPIIQNNMKRKRRRCSRMGEDNGTITGPNAAFCEVERFGFEPGPEFSLETFQRYADDFKVKYFRNENISHLSDNTTILNGTSEPSLETIEGEYWRMVENPTEEIEVLYGADLETGVFGSGFPSKSSHVAASHEQYIKSGWNLNNFARLPGSLLSYETSDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDACKLEEAMRKHLPGLFEEQPDLLHKLVTQLSPSILKSKGVPVYRCVQNPGDFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGNTAIELYREQGRRTSISHDKLLLGAAREAVRAQWELNLLKKNTSNNLKWKDVCGKDGLLAKALKTRVEMERVRREFLCRSSRALKMESSFDAKSERECGICFFDLHLSAAGCHCSPDRYACLNHAKQFCSCSWDSRFFLFRYDISELKILVEALEGKLSAVYRWAKSDLGLALSSYISVDKEPKRLYPSNLSHSSRATVNKEVALHPSNKFMEDSKLLDVPVVDQANSVNNKDQGHPKQRKSAAVVSSSSHTKEPSTFNTSKPTREMANRKVHANKEAAICRSKPITPRCQLSQEDTSFVLALPVPQQGSEKSSLCRRKNIILLSDDEDDEMKMPDSNRGKELPHMPAGAKNKASLCNNIENTSLTIPVTDAAAMGEKDGITLPHEDMSSNLTQPLHVKQEYHEQRGPVLPSTPADLSLHIGLTTAESVKNIPASSKVEASGHRLESLEVCPLSPQHSGLAKVKKEENHEKIGGCSTVNGNISCGLNRQKGPRIAKVVRRINCNVESLEFGVVLSGKSWCSSRAIYPKGFRSRVKYINVVDPSSMCYYISEILDAGRGCPLFMVSLESCPSEVFIHMSATKCWEMVRERVNQEIAKQHKLGRKALPPLQPPGSLDGFEMFGFSSPAIVQAIEALDRSRVCNEYWDSRPFSRPQGQNSQPYQTNVKGGGGNDQGAPMSQGTPVGDVAVLRSLFKKANAEELNSLYSILSDTKPAADRAPIAQLLYEEIHKSQPP*

Promoter(3k):

>AM02G025130.1
TTTTCATTCAACTAGAGATGGTTTTCTGGTTGTGAGTAATTTGGAGGTGGGTGGTCAGGATTGGGTGTTTGATAATAATGTGTTTGATTTTAGGGGAAAAAAGTGTTTGAAATTATTCTGCTTGGAAAGTTGGTAACAAGTAAAGTGTGAAACAAATAAGATGACGTGGTCTTATCAGCGTGCAAGTGGTTAAAAACATCTATGCTAACAATCCTCTTCAATAAATAGCATATCACACGGATTATGCTTTGTGGAACTACCTATCCAATTTAAACTAGTCTTTAACTTTGTAAAAATTTGCTAAAAACAATATGGAGCCACTCTATCCTGCATCGAACTATAAAGGGATTAGATGAAGAGAAAATCGGATTCATAAAATGATACATGCACAAATGAATTCACAAGATTCCATTTCAATAAAGAAGAATGCTAGCTTCATTCACTTTGACAGTCGCTTTTAACCACTCATTCGCTACACATGCCATTTCACCCTATTTGTTTGACTCTTTAAGGTTATAGGCTCTTTCAGTATTTTTGAAACACTTTTTTCCACTCCAATTCCATGCCCATGGAGGAACAAGAATTAAACACTCCATCCATTTGTTCCCTGGAAAGTGAAATACATTTTTTCCGCACTACGTTGATCACTTTCTTTTAAGGTCTACCCAAGTAAACACACACAAACAAACACACCCAATAAAAGAACTTTCTCTCACACACGCACACCCCACACAGGGGAGGAGCCAAAATGGGTAAAAGGGGAGGGGGTGCACTAAAACACACATAGGGGGTGGGGTGAAATGGGAGGAAGAGGAAGAAGATGTGACAGGGTTAGGGGTGAATATGGGAGAAGCTAAAAAATGGAAAGTGAGGGAGTTGAAGTTTTGTTTCTTCATGGTTGAGATGGTGTTTGGAGCTTTTTCATTCAACTAGATATGTTTTTTTGTTGTTGTGGGCAATTTGGAGGTGGATGGTGAATGTTGGGTGCTTGGTAAAAAAAGCATTTGATTTTAGAGGGAAAAAGTGTTTGAAGTTATTTGTCCTGGAAAGCCGATAGCAAATAAAGTGTGAAACAAATAGGATGACATGGCCTTCTCAGCGCGCAAGTGGTTAAAAACATTTGTTAATGCGGCTGACGCTAGCAATCCTCTTCAATAAATAGCATTATCACATGGATTTCGCTTTGTGAAACTACCTTTCCAATTTAAACTAGACTTTAACTTTGTAAAAAATTGCAAAAAAAAATATGTATAAATATTATTTCCCCTTTAGTATTTTTTAGCTCGCAACATGATGACGTGACATTCTCAGTGCGCAAGTGGTTAAAAACATTTGTTAATGTGACTAACGCTAGCAATCCTTTTCAATAAATATCATAATCACATGGATTTTGCTTTGTGAAACTACCTTTTCCAATTTAAACTAGTCTTTAACTTCGTAAAAAATGCTAAAAACAATATATATGAATATTATTTCCCCTTTAGTATTTTTTATTTTAGAAATTGAGGTTTTTATAATTTATATGGACTTGTCAAATTTAACCAAGTCCACAAAATGGGCAAAGCCTAGACCAACTCGAACATTGAAAAACCGAATACACCCTTGGGCTCAATTACGTTACAAATTTCTTTACAAGTCTGAAACCACCCCAAATGAAATTTGTCCAAATAACAAAAAAAACAAAAAACCCAAAAGAAGGGGAAAAGATCGAGTAGAAATCAATGAAGAGGATACAATTTGTCTATGTTGTTGCTTCCCTTAATCATCATCTTCTTCCTTTATCTTGTTAGGGTTTGTAAAGTTTGCAGTTAGTCTTCAATTCTCCATGCTCATCGTTCTTACTACAAGCCATCTATAAGACTACCAATTTATCCTTATTTTTTTTCTGACGGATTCACACCATTCTACCAACACAATTTTTGCCTATATTCAATCATATGCTAGAACATCGCAATTCCTTCAAAATTGCTCATCATAGGGTATGGATTTTCGTACTTTGTTAGGATTTACGCTAATTACTTTAAAATTGCTTGATTATAGTAAAGATTGACTAAGGATTAGTATTAATAATATTAATTATCTGCTTGGTCTATATCCATCAAACATTCAAAATGATATTGCTGTAGTGAATTTATAATGATGTTTGTTTTGATCTATACATCTATAAGATTAGGTATACTTGAACAGATAATGGTAACTATGTTTATTTAGATCCTTTCCACTGGATCTGTAAGGTTACTTTGAGATTTTGTCAGTGATTTGTTGAATTGTTTTGATCATGATCCGGCTGTTAAAATCTAATTAACTAAAGATTGTATACTCCTGAATGGTGAGAAAATGTAAAAGGAGTGTGAGAGAGAAATATTAGAAGAAATATTTATGTAAGCAAGAAAGGGATAAAGAAGGCTGGTCATGTGCATTTAGATAATGCATTCTTTTATAGTTAGCTTGATCCTTCATTTTTCAATTATTCCTCTACTTAATTGAACAAGAATGTCAAACAAGAAGATATTGAAGTATCGATATGCCTTTGCTTTTTGATCTGCCATTCTGTTGGATGAATGCAAATAGCATCATTAAAAATAGTTCAGTTTCAGTCACAAGAGTTAAGGATGGTAATTTTGACGAAATGACGAAAGAGAAGTATGGAACATTTAGATACTATGTTGCATGCAGATGTTTTACCTTATCTGAGCTGCCTTTTCTCTGATCGTTGTGATATGTTTCAGATTGGTGCTTTCCAGCTATTTTTACAGTTACCGGAACCGTGATTTAGCTTCTATTGATTTGATTTCTAGCATCTGCAGTGGAAGTTCAGAGGACGGCAGACACTACACCTTACACTTTATTAGTACACTTCTTATCAAAGTAAGCTTAATAAAGCCTAGAAGAGATGTTTTTTTTATGTTGTGTATGAACGTATAGTGCTGACTTTTTGATTCATGCAGGGAATACAAATCAAAGACACTATTACCTATTGCCTTTTGCATAAGGTTACTG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF02373.25	JmjC	385	501	8.10E-47
PF05965.17	FYRC	1070	1153	1.30E-23
PF02375.20	JmjN	146	179	2.20E-18
PF02928.19	zf-C5HC2	608	658	4.20E-13
PF05964.17	FYRN	1019	1062	7.50E-10

Gene family

Gene family	Subfamily
Transcription Factors Family	Jumonji
Epigenetic Regulators	JMJ16

Gene Ontology

GO term	Description	Category
GO:0009791	post-embryonic development	Biological Process
GO:0003006	developmental process involved in reproduction	Biological Process
GO:0009653	anatomical structure morphogenesis	Biological Process
GO:0051253	negative regulation of RNA metabolic process	Biological Process
GO:0010558	negative regulation of macromolecule biosynthetic process	Biological Process

InterPro

InterPro term	Description
IPR004198	Zinc finger, C5HC2-type
IPR003349	JmjN domain
IPR003347	JmjC domain
IPR003888	FY-rich, N-terminal
IPR003889	FY-rich, C-terminal

trEMBL

trEMBL term	Description
A0A1S2XWD1	_

SwissProt

SwissProt term	Description
JMJ16_ARATH	Putative lysine-specific demethylase JMJ16

KEGG

KO	Description	Enzyme
K11446	[histone H3]-trimethyl-L-lysine4 demethylase	[EC: 1.14.11.67]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT1G08620	Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein
Medicago sativa L.	MsG0280008650.01.T01	_
Oryza sativa L.	LOC_Os05g10770.1	transcription factor jumonji, putative, expressed
Cucumis sativus L.	Csa012320	_
Glycyrrhiza uralensis Fisch.	Glyur000226s00010845.1	_
Codonopsis lanceolata	Cl_chr07_17910T	_
Arachis hypogaea L.	AH19G23080.1	Putative lysine-specific demethylase JMJ16 like

Expression pattern