| Gene ID | Annotation |
|---|---|
| Am02G025130.1 | Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am02G025130.1 | mRNA | Chr02 | 159597976 | 159609021 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF02373.25 | JmjC | 385 | 501 | 8.10E-47 |
| PF05965.17 | FYRC | 1070 | 1153 | 1.30E-23 |
| PF02375.20 | JmjN | 146 | 179 | 2.20E-18 |
| PF02928.19 | zf-C5HC2 | 608 | 658 | 4.20E-13 |
| PF05964.17 | FYRN | 1019 | 1062 | 7.50E-10 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | Jumonji |
| Epigenetic Regulators | JMJ16 |
| GO term | Description | Category |
|---|---|---|
| GO:0009791 | post-embryonic development | Biological Process |
| GO:0003006 | developmental process involved in reproduction | Biological Process |
| GO:0009653 | anatomical structure morphogenesis | Biological Process |
| GO:0051253 | negative regulation of RNA metabolic process | Biological Process |
| GO:0010558 | negative regulation of macromolecule biosynthetic process | Biological Process |
| InterPro term | Description |
|---|---|
| IPR004198 | Zinc finger, C5HC2-type |
| IPR003349 | JmjN domain |
| IPR003347 | JmjC domain |
| IPR003888 | FY-rich, N-terminal |
| IPR003889 | FY-rich, C-terminal |
| trEMBL term | Description |
|---|---|
| A0A1S2XWD1 | _ |
| SwissProt term | Description |
|---|---|
| JMJ16_ARATH | Putative lysine-specific demethylase JMJ16 |
| KO | Description | Enzyme |
|---|---|---|
| K11446 | [histone H3]-trimethyl-L-lysine4 demethylase | [EC: 1.14.11.67] |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT1G08620 | Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein |
| Medicago sativa L. | MsG0280008650.01.T01 | _ |
| Oryza sativa L. | LOC_Os05g10770.1 | transcription factor jumonji, putative, expressed |
| Cucumis sativus L. | Csa012320 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000226s00010845.1 | _ |
| Codonopsis lanceolata | Cl_chr07_17910T | _ |
| Arachis hypogaea L. | AH19G23080.1 | Putative lysine-specific demethylase JMJ16 like |