Gene detail

Detail information of Am02G024550.1 Annotation

Gene ID	Annotation
Am02G024550.1	myb domain protein 15

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am02G024550.1	mRNA	Chr02	158014647	158016170	+

Sequences

CDS:

Protein:

Promoter(3k):

>AM02G024550.1
AGGCCTACGCTAATATTAAATAGTTGACTTTTTTTTGGAGTTTCCTGTAGCGTCGGTCTTAGCATTAGTGTCCGATTAGCGTAGGCTTAGCCGACGCTAATGTAGCGTCGGTCTGAATATATGGGACGCTAAAGATTAGCTTCGACCGTTTTAGCGTCCACGCGTGGCCGACGCTAATCCGACTCTAAAACACTGTTAGTGTCCATTTCTGGTCTTTTAGCGTGGGCTTTTGGCCTACGCTAAAAGCTATTTTTCTACTAGTGGTTGGACAGTGGTAAGGCAAACTCAAGAAGTTGGCTTGGTGGCCATGGAGGAAATAGGGAGATGGACTTTCTCTTGCCTTTTGTTTTTAAGGTTTACAACTACAAGTTAGAGATGGCAGGGGGATCCACGAGTTAGGGTTTACATCAACAAACGATGAAGATTCTTAGTTTTCTTGGTTGAGGTTGGGGAAGATGATGAGAAATTAAAGTTTAATTTTGAGGAAGATGACAAGAAAGTAAATAGGACCTAATTGAAACAGAAATATATACATAAATGATTGTCATACTAGCCAATTAACGCTGCCACATAAGCATTTAATTGTCACGTCATCCTCTGTTAACAGAGATAGACGGAAATTCCAAAAAGGATTCTTATGTCAAGGATTTGAAACATAGAGGAACTATTAATTTGTAGGAAAAACTCAAAGGACAAATGTGAACTTTTAAAATAACATAATGAGTTTTGGCTCTTAGAGGTTTTAACGAAGCCTCACATTCTCTCGTAAGGGTTGGGGCACCCATTGTGTCCCTCTCAATATATTTGCTTATCTAAAAAAACTATATTTCTAAATTTGTGTGAAATGACCAAAGTGACATATAATATGAGACAGATGGAGTACTCGAGAGGATCCAAACTCGAGAAAAACACAATAGATTATGTCACTGTGTTTATCTCTCTCTCATCTTATAACTCATTTCTCTATCTCAATTTCTCTCTACAAAAATAGTCTAAAGTCACCAAGAGCACTTGGATGAGATGGTAGGGGTCTCTTCCAGCTTAACTAAGGTTCTGGGTTTGAACCCAGTCAGCAATGTTGAATCTCTTGAGGGAGACCGTTTTCGCCCATTGTGGTCCTACCCGGCTCGAGAGATTAGTCTCTACAGTTGCGTGCAGGGGATGCCCGGTTTATAAAAATAATAGTCTAAAGTCACCAAAAGTATGGATTTGGTAACGTCATCAAATCCTAATCCGAAGATTTTGAATTACAAAAATCATTTAGAATTTAGTTAGTTGTAGAATTAATCAGATACTACTATAATTTTCAATCTTTCAGTAGCAATGTTTAAGAGTAGGAAGGATATTTATTTGTTAATCTTCTCGTCGATTTGGTACGAAAGAGACATCTTAATTATAGTAGAGTCGCAAGAAGAAATCAAAGCACGTGTTATAGTAATAATTACTATGGTGTGCATGTATGTCCTTTTTTATAGACAATGTTAGTGGGGTGGGAAAATGTTAGTTTCTCGAATTTGAGTTCAGAACCTCATTCTGACACTTATTTGGTATACTCTTTCGGTATCTCGATTTTGATTCGTCAACCAGGCATGGATGTCATTGATGTCTCGTGCATGGATAAAGCAAAACACGAATTGATGGTGACATTGTCCAGGTGCAAATTACATGCACTGTTCTTAATTTGAAATTTTTGTCTTTCTACTTTGGAGTTTTAGAACAATAATGCGTAATGCTTTATTTGGTTTTGAGAAAAAAAAGGTAAGAGAAAACAAAAGCAGAGAGAAAAGGAAAAGTTGTAAAAATAGAAATTGAGATCCATGACTATTTAATTATTTTTAGAAATTAGAAAAGAAAAAAAGTTAAAATTTGCATCTTTGATTGGATAGAAAGTGACAAGAAGAACTGTTTAGGATTATGGATTGTAGAACATATTAGGTGCTTTTTTAGTTGATATTCAATGAATTTAAGTCTTTACACAAACTTTTTTGATAGGTTGAGGCCTAGATTGCTTTTAAAAATATATGAGTAATTTACTCGATCTCACTTTATTCACTCAAAATCTAACACAAGTATCCCATTAATTTAGTATCAACGTGATGTAAATGTATAAATATATTTTAATTGAAATCATGTGACTGATCTATGGAACTTGTGCGTGTATCCACATTTTTTCAAAGACAACCTATGTATTACCGTTTTCAAAGACAATCATGGGTTGCTTCTCGGACTATGTGGGCATTGTTCCTCTTTTGAAGCAGAGGTTCTGGCTGTCATGAAATCGATTGAAATTGCCGCTGAGAGAGAGTGGTGTAAGCTTTGGATAGAGTGTGACTCTACTCTTGTTGTGACTGCTTTTGAGTCGGTTGGTTTGGTTACTTTGAGGCTCAAAAACAATAGGTCAATATACAAAATAACAAAATGTATCTATAAAAATCGCTGAAGTTATTTTATTGTAACTATAACTTAATTATCTTGTTTTTTATATACTATACAGACTAGTATTATCAAAGAATTATACCGATAAAAAGATTACCACAAAAACTTTTTTATACAACAAATGAATATCTTTAGTACCCCCACCCACCTCTTTAGACTTTTATACATAAAGAGTCAAATGAATGGACACAGAAAGTGTCACATAATCAGTGAAATCGACATGTTGTTGTCCCTTATCCTAAACGGAAGTACTATTAGAATGTTCAACTCAACTCATTCCCATATATATATATATATATATAAAAGACAGAGATAGTGTATTTCGAGGAAGGTGGTAAAAGGGTTTGAATAAAAAAGAAATATTCCTGTCGTGGACTATTATTCTTTGAATAGTGGTGTGCGGAATACACAAGGATAAATAGCCTTGTACATGGCAAACAAAGTTGAACAATCAATCAATCAATCCCATTAATTTCTAAAGAAGCATAATCATAGCTAGAGAGAGTAGTGAAACTATATTCATAGCTAGCCTCTCTACTCTATCAACTTATAATTAATTTGAAG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00249.34	Myb_DNA-binding	14	61	3.50E-31
PF00249.34	Myb_DNA-binding	67	112	3.50E-31
PF13921.9	Myb_DNA-bind_6	17	75	3.30E-21
PF13921.9	Myb_DNA-bind_6	70	120	3.30E-21

Gene family

Gene family	Subfamily
Transcription Factors Family	MYB

Gene Ontology

GO term	Description	Category
GO:0005634	nucleus	Cellular Component
GO:0010597	green leaf volatile biosynthetic process	Biological Process
GO:0003677	DNA binding	Molecular Function
GO:0001067	transcription regulatory region nucleic acid binding	Molecular Function
GO:0006355	regulation of DNA-templated transcription	Biological Process

InterPro

InterPro term	Description
IPR001005	SANT/Myb domain
IPR017930	Myb domain
IPR009057	Homeobox-like domain superfamily

trEMBL

trEMBL term	Description
A0A482E9D1	_

SwissProt

SwissProt term	Description
MYB15_ARATH	Transcription factor MYB15

KEGG

KO	Description	Enzyme
K09422	transcription factor MYB, plant

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G23250	myb domain protein 15
Medicago sativa L.	MsG0180001785.01.T01	_
Oryza sativa L.	LOC_Os04g43680.1	MYB family transcription factor, putative, expressed
Cucumis sativus L.	Csa019344	_
Glycyrrhiza uralensis Fisch.	Glyur000557s00018783.1	_
Codonopsis lanceolata	Cl_C00625_unscaffolded_00090T	_
Arachis hypogaea L.	AH19G25890.1	MYB-like transcript factor 6 like

Expression pattern