Gene detail

Detail information of Am02G024060.1 Annotation

Gene ID	Annotation
Am02G024060.1	myb domain protein 305

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am02G024060.1	mRNA	Chr02	155072143	155073386	+

Sequences

CDS:

Protein:

Promoter(3k):

>AM02G024060.1
GTCTCCCAGCTACCATCACAGAGGACATCTCATGAGCGGGCACAGCATGACATCCATTTTGTAAGTCACCTTCCAGAGCATATGCATAGGTACATTGATGACATTCTCAATGTGAATGGGGATGGAAACTGTGGCTATAGATGCATTGCTGCCTCACTTGACTACTCGGAGCACAGTTGGCAACTAGTTCGCAATCATTTGATTGAGGAGATGGACACAAATTATTTTCTATACTCACAAGTGACAGGTGACGACTGCAACACAGTTAGGGCCTCATTAGATGCTCTCCCACAAGAAATTCAACCTCCTGAGAAGTGGATGTCGATGCCTGATATGGGACATGTTATAGCAACTAGATATCAGATAGCCCTTGTTATGTTATCACCTTCAGATGGTGGGTCATGGACATTCTTCCATTTCAGAGGAAAATATGTTTCTAGTGAGAGCCAATTGTTCTGTGTGGGGTTGATCAGGGGGAATCATTGGATCCAGGTTATGTTGAACGGTACTAGTCCATTACCTCCCATTCATCCTACTTGGAGTGCATATGCTTCATCTGAAGCTAGATCGTGGTTATATCCATATTTTGGACGTCTACAGTTATGGTCTTCTTTTGTTCCAGAGCATGTTGCACCGACCGGCCCAGTTGATTACATAAACATTACCTGATTATATTATATTATATTTTATTTCATGAGTTTATATTATATTATATTTTATTCCATGAGTTTATTATTTGACAGTCTAGATTTTGCCGACACTTTTTAACTGTCTTGATCTTGCCGACACTTTCAACGGTCTAGATTTTGCCGACCACTTTTCATCAACGGTGGAAATCCGCTTTAGGGTTTCAAATTTTCCCTATAAATAGACCCATTAGGTTTCACTTATTTCACACACAGCACAAGCAAATGGACACCCTAAATACACAATACTCTCGTGATTCAGCACTCACTGCCCTTCGCCATCACGACACAATCACCAACAGAGAAAATGGTGCCTATTTCCAGTGTCCAAAACCTATTTTATGTAGACTTAAAGACAATATCACCTTTGCTGGTCTCAAAGCTAAACTACAGAGTAAGGTGCAAGTGGAGGGTGACGAGCGGGTCACTCGTATCATTTATCGCAACCCCAGTATGGGCGATAATAATCGTGTTCGCTGGTCCACAATGGATGTGAAGAACGACGATGACGTGTGAGCCATGATGGACAGTTATGACATGTTTAGACTTCGGAGTCCTTTACAGTTGTATGTCGAAATCACAAGGAGTGTCGCTGAGATCCTTCGCCGTTTAACTCCACCATCTCAGTAGTTTTAGACCTTGTTTTTGTTTTGTTTGTTGTTGTAATCTGTTATTTTCAGTCAATGTAGACGGTGTTTTTAATTAATAAAATAAATGTTTAATTTCTTATTTTTGAATTCCGGAAACACAATAATAAGGGATAAATTCGGAACTCAATTTATTGGGATTTCCGGAAATACCCTAAAATTAGATAAATACGAAAACAAATTTTTTGGGATTTCCGGAATTACCTTATTTTAGTGTATTTCAGGAAAGTATAATGTGTTCCGGAATTACACTAAAATGAGGTAATTCTGGAAATCCCAAAAAAATTTGTTCCGGATTTATCTCATTTTTAGGTATTTCTGGAAATCCCAATAAATTGAGTTCTGGATTTATACCTATTGACGTAATTCCGGAATTTTTTTTGAAGTCAGGGGTAATATCGTCCGTTTTGTCAATTTGGGGGGTATGAGGTATAAAAAGGGGGGCACAAAAGAAAAAATCCTGCATTTATATATGCCCCTAAAAGAAAATGAAATTTTCACTTATTTTTCTGTATAATTTTATTTTGACTCTCTTAAATTTAAAATTTTGTATTTCGATTCCTCATCTCTTTAAACTGTGACAGTAAAACAAAGATTAAATTCTTAATTTAGTTTTTGAACTTACGTTATCTTTTTTACTTGATCTTAAAGTATATAAAATAATAAGTACTCCCTAAATTTTGCAAAATCTATAAAATTGATCTCTAATATCTTAAAAATTATGTCTTATTAGTCGCCATACATGACTACTACTCATAAAACTTTAAAAAGTAATTTGATCGATAAATGTCAGAAATTTAAAAATTACTTATTTTTATATACTTTAGGAATTAAATATGATATGAGATGTATGCTTATCAACAAAATTGAGGATTTGCTTCGGTTTAATAAATCAATTAAGGATATTTAAAAGAAAAAAATCAACAATTCTGTAAACCAAACCATCTTCATAAATTTTATTTTGCATCATCTAACATAAGGCCATGGGTCCGTCACAGGAAGATTGAAAAATAATTAGGACTATTAATTGAGTAATTAGTCTAATAATTTTGTGTTATGACACATTATAGTTAGTAGTTTTGTGCAGATGCATAAGCCTTACGGACAGGTGTCCAATGTCCTCGAACAAAATAGATTTCTCTTTCTCTTAATTAGCATCAATCTCAACAATAATATATATATAATCATTTGTGTTTTTTATTCTCAGTTGGACATGTCACATGTGTGTCACCTAATTGCTCAACACATTCTTGAATTTCCAAATATGCCCTATTGTTAAAATAGCAGGTCATTCCATCATTGACTGACTGATCTCAATCTTCCAACCCCTTTAAAGTGTGATCATAAAACAAAACTAAGTTGAATTAATAAGAACCAAATATAAATAATATAGAGAGGGTAAAGGCATTTTGGTCATTTCATGATAAACGATGCTTTTTTAAGCGCCACTTGAATGAACCCTTTTGTTTAATCTATTTTTCTTAAACAATATTACCTTGAAGAATGAAATGGGTAAAGATCATATTAGAAAGTGACCTTTGATTGACTATAGAATCAAGTTGGGGACACAACTGCAAGTATAAATATGCAACAAACAAACCACTAAGCCCAAATCATCAGTGGCTCATAAATTGGAAGACAGAAAAACTTTATCTCAACCTTTCTGC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00249.34	Myb_DNA-binding	24	72	1.80E-30
PF00249.34	Myb_DNA-binding	78	122	1.80E-30
PF13921.9	Myb_DNA-bind_6	27	86	4.20E-22
PF13921.9	Myb_DNA-bind_6	82	134	4.20E-22

Gene family

Gene family	Subfamily
Transcription Factors Family	MYB

Gene Ontology

GO term	Description	Category
GO:0006355	regulation of DNA-templated transcription	Biological Process
GO:0003700	DNA-binding transcription factor activity	Molecular Function
GO:0016020	membrane	Cellular Component
GO:0001067	transcription regulatory region nucleic acid binding	Molecular Function
GO:0003690	double-stranded DNA binding	Molecular Function

InterPro

InterPro term	Description
IPR001005	SANT/Myb domain
IPR044676	MYB-like transcription factor EOBI/EOBII-like, plant
IPR017930	Myb domain
IPR009057	Homeobox-like domain superfamily

trEMBL

trEMBL term	Description
A0A1S2Y2L7	_

SwissProt

SwissProt term	Description
MYB2_ORYSJ	Transcription factor MYB2

KEGG

KO	Description	Enzyme
K09422	transcription factor MYB, plant

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G24310	myb domain protein 305
Medicago sativa L.	MsG0480019379.01.T01	_
Oryza sativa L.	LOC_Os02g40530.1	MYB family transcription factor, putative, expressed
Cucumis sativus L.	Csa009714	_
Glycyrrhiza uralensis Fisch.	Glyur000347s00029036.1	_
Codonopsis lanceolata	Cl_chr08_31080T	_
Arachis hypogaea L.	AH09G22470.1	R2R3-MYB factor like

Expression pattern