Detail information of Am02G023620.1 Annotation
Gene IDAnnotation
Am02G023620.1 RING/U-box superfamily protein
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am02G023620.1mRNAChr02153696857153704431+

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF13639.9zf-RING_2112811694.50E-10
PF12678.10zf-rbx1112111691.50E-07
PF13923.9zf-C3HC4_2112811682.70E-07
PF00097.28zf-C3HC4112811689.00E-07
PF17123.8zf-RING_11112811551.30E-06
Gene family
Gene familySubfamily
Ubiquitin FamilyRING

Gene Ontology
GO termDescriptionCategory
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InterPro
InterPro termDescription
IPR001841Zinc finger, RING-type
IPR013083Zinc finger, RING/FYVE/PHD-type

trEMBL
trEMBL termDescription
A0A8T0KZR2 _

SwissProt
SwissProt termDescription
SDIR1_ARATHE3 ubiquitin-protein ligase SDIR1

KEGG
KODescriptionEnzyme
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Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT1G04790 RING/U-box superfamily protein
Medicago sativa L.MsG0180001968.01.T01 _
Oryza sativa L.LOC_Os04g43220.1zinc finger, C3HC4 type domain containing protein, expressed
Cucumis sativus L.Csa005730 _
Glycyrrhiza uralensis Fisch.Glyur000033s00008623.1 _
Codonopsis lanceolataCl_chr08_36900T _
Arachis hypogaea L.AH18G03980.2E3 ubiquitin-protein ligase SDIR1 like

Expression pattern