| Gene ID | Annotation |
|---|---|
| Am02G022730.1 | Coatomer, alpha subunit |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am02G022730.1 | mRNA | Chr02 | 150330442 | 150335236 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF06957.14 | COPI_C | 814 | 1217 | 8.10E-168 |
| PF04053.17 | Coatomer_WDAD | 340 | 767 | 1.70E-130 |
| PF00400.35 | WD40 | 84 | 121 | 1.10E-39 |
| PF00400.35 | WD40 | 126 | 163 | 1.10E-39 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | DWD |
| GO term | Description | Category |
|---|---|---|
| GO:0005198 | structural molecule activity | Molecular Function |
| GO:0006890 | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | Biological Process |
| GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | Biological Process |
| GO:0006886 | intracellular protein transport | Biological Process |
| GO:0000139 | Golgi membrane | Cellular Component |
| InterPro term | Description |
|---|---|
| IPR036322 | WD40-repeat-containing domain superfamily |
| IPR015943 | WD40/YVTN repeat-like-containing domain superfamily |
| IPR019775 | WD40 repeat, conserved site |
| IPR001680 | WD40 repeat |
| IPR020472 | G-protein beta WD-40 repeat |
| IPR011048 | Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily |
| IPR006692 | Coatomer, WD associated region |
| IPR010714 | Coatomer, alpha subunit, C-terminal |
| IPR047312 | Coatomer subunit alpha, WD Associated Region |
| IPR016391 | Coatomer subunit alpha |
| IPR024977 | Anaphase-promoting complex subunit 4, WD40 domain |
| trEMBL term | Description |
|---|---|
| A0AAN9FJ01 | _ |
| SwissProt term | Description |
|---|---|
| COPA2_ARATH | Coatomer subunit alpha-2 |
| KO | Description | Enzyme |
|---|---|---|
| K05236 | coatomer subunit alpha |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT2G21390 | Coatomer, alpha subunit |
| Medicago sativa L. | MsG0480021300.01.T01 | _ |
| Oryza sativa L. | LOC_Os03g50340.1 | coatomer alpha subunit, putative, expressed |
| Cucumis sativus L. | Csa018733 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000372s00017124.1 | _ |
| Codonopsis lanceolata | Cl_chr02_28300T | _ |
| Arachis hypogaea L. | AH09G23780.2 | Coatomer subunit alpha-1 like |