| Gene ID | Annotation |
|---|---|
| Am02G020840.1 | SNF2 domain-containing protein / helicase domain-containing protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am02G020840.1 | mRNA | Chr02 | 144113960 | 144133803 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF00176.26 | SNF2-rel_dom | 536 | 808 | 1.20E-73 |
| PF00271.34 | Helicase_C | 1062 | 1173 | 7.40E-21 |
| PF07529.16 | HSA | 27 | 93 | 7.20E-15 |
| PF04851.18 | ResIII | 517 | 678 | 1.50E-10 |
| PF00270.32 | DEAD | 540 | 667 | 6.40E-08 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | Others |
| Epigenetic Regulators | CHR13 |
| Transcription Factors Family | SNF2 |
| GO term | Description | Category |
|---|---|---|
| GO:0005524 | ATP binding | Molecular Function |
| GO:0016787 | hydrolase activity | Molecular Function |
| GO:0035267 | NuA4 histone acetyltransferase complex | Cellular Component |
| GO:0004386 | helicase activity | Molecular Function |
| GO:0004674 | protein serine/threonine kinase activity | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR038718 | SNF2-like, N-terminal domain superfamily |
| IPR000330 | SNF2, N-terminal |
| IPR001005 | SANT/Myb domain |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR014012 | Helicase/SANT-associated domain |
| IPR001650 | Helicase, C-terminal |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| trEMBL term | Description |
|---|---|
| A0A1S3E3U6 | _ |
| SwissProt term | Description |
|---|---|
| PIE1_ARATH | Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 |
| KO | Description | Enzyme |
|---|---|---|
| K11661 | helicase SRCAP/SWR1 | [EC: 5.6.2.-] |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT3G12810 | SNF2 domain-containing protein / helicase domain-containing protein |
| Medicago sativa L. | MsG0180002976.01.T01 | _ |
| Oryza sativa L. | ChrUn.fgenesh.mRNA.85 | expressed protein |
| Cucumis sativus L. | Csa002463 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000024s00006637.1 | _ |
| Codonopsis lanceolata | Cl_chr05_39800T | _ |
| Arachis hypogaea L. | AH09G02720.1 | Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 like |