Detail information of Am02G020090.1 Annotation
Gene IDAnnotation
Am02G020090.1 RNA polymerase Rpb8
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am02G020090.1mRNAChr02140164326140168956-

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF03870.18RNA_pol_Rpb871432.30E-48
Gene family
Gene familySubfamily
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Gene Ontology
GO termDescriptionCategory
GO:0009303rRNA transcriptionBiological Process
GO:0006354DNA-templated transcription elongationBiological Process
GO:0006353DNA-templated transcription terminationBiological Process
GO:0001172RNA-templated transcriptionBiological Process
GO:0006352DNA-templated transcription initiationBiological Process

InterPro
InterPro termDescription
IPR012340Nucleic acid-binding, OB-fold
IPR005570DNA-directed RNA polymerases I, II, and III subunit RPABC3

trEMBL
trEMBL termDescription
I3T9W4 _

SwissProt
SwissProt termDescription
RPB8B_ARATHDNA-directed RNA polymerases II, IV and V subunit 8B

KEGG
KODescriptionEnzyme
K03016DNA-directed RNA polymerases I, II, and III subunit RPABC3

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT3G59600 RNA polymerase Rpb8
Medicago sativa L.MsG0180003251.01.T01 _
Oryza sativa L.LOC_Os06g48230.1DNA-directed RNA polymerases I, II, and III subunit RPABC3, putative, expressed
Cucumis sativus L.Csa002878 _
Glycyrrhiza uralensis Fisch.Glyur001288s00028003.3 _
Codonopsis lanceolataCl_chr06_06810T _
Arachis hypogaea L.AH12G32620.1DNA-directed RNA polymerases II, IV and V subunit 8B like

Expression pattern