Gene detail

Detail information of Am02G020030.1 Annotation

Gene ID	Annotation
Am02G020030.1	ABC-2 type transporter family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am02G020030.1	mRNA	Chr02	139899224	139908568	-

Sequences

CDS:

>Am02G020030.1
ATGGAGAGAACGAATTCGAGTACATTGGGGTTAGTGAGAGCGAAATCGGATCAGCTGGTGGAGTCAATGGTGGCGGCACTGAAGTCACCGCAGTCAAGTGATCATTCGGCGAACGGAGGAGGAACGGTGGAAAGCGGAGGAACGCTGTCAAGGAAGTCAAGCCGGCGTGGGTTGGGAAAGAATACACATATAAGGAAGTCGAGGAGTGCTCAGATTGAGATTCATGAATTGAGTAGCGGCGCGGCTCTTAGCCGAGCTTCAAGTGCTAGCTTGGGACTTTCCTTCTCTTTCACTGGTTTCACTATGCCTCCTGATCAAATTGCTGATACCAAACCCTTCAGTGATGATGATGATGATGATGATTATATGATTCCTGAGGATATTGAAGCTGGTACTGGGACAAAGTTAAAGTTTCAAACAGAACCTACTCTGCCCATATATCTAAAGTTCACCGATGTGACCTACAAGGTAGTGGTGAAAGGCATGACATCAAGTGTGGAGAAGGAAATATTGAATGGAATCAGTGGTTCTGTAAATCCAGGTGAAGTATTGGCATTAATGGGTCCCTCAGGAAGTGGAAAGACAACACTTTTAACTCTCCTTGGAGGAAGGCTAACTCATCTACCCACAATTGGTGGTTCTATTACTTACAATGACCAATCATATTCCAAGTTCCTAAAAAGCAGGATAGGATTTGTGACTCAAGATGATGTTTTGTTTCCTCACCTAACTGTGAAAGAGACATTGACTTACGCTGCCCGGCTAAGACTACCTAAGACACTCACAAAGGAGCAAAAAGAAAAACGAGCTTTAGATGTCATTTATGAACTTGGCTTGGAGAGGTGCCAAGATACTATGATCGGTGGTTCCTTTGTTCGTGGTGTATCTGGTGGAGAGAGGAAAAGAGTTTGTATTGGCAATGAAATCATAGTAAACCCTTCCATTCTGTTTCTTGATGAACCAACTTCTGGTCTGGATTCAACAACAGCCTTGAAAATTGTTCAAATGCTGCAAGACATAGCTGAGGCTGGTAAGACAGTGGTGACTACAATTCACCAACCATCAAGCAGATTATTTCACAAATTTGACAAGTTGATTCTTCTTGGGAAAGGAAGCTTGCTATACTTTGGAAAAGCATCAGAAGCAATGAATTACTTCCAATCTATAGGATGTTCACCACTTATTTCTATGAATCCAGCAGAGTTTTTACTAGACCTTGCTAATGGAAACATAAATGATGTTTCTGTACCATCAGAGTTGGAGGATAAAGTTCAAATGGGAAATGCACAAGTCGAAACACACTACGGTAAACCATCGCCTGCAGTAGTCCATGAGTATCTAGTAGAGGCATATGAAGCTCGAGTCGTGGAAACCGAAAGGAAAAAAATCATGATTTCTTCTTCTGTCCCTCTTGATGAAGGCTTGAAGTCCAAAGTATGTTCTCCTAAAAGACAATGGGGAGCAAGTTGGGATGAGCAATTTTCTATACTATTTTGGAGAGGAATCAAAGAAAGGAGACATGACTATTTTAGCTGGTTGAGAATCACTCAAGTTTTATCCACTGCTATCATCTTAGGATTACTGTGGTGGCAATCTGATGCTAAGAACCCAAAAGATCTGTCAGATCAGGCAGGACTACTTTTCTTTATTGCTGTGTTCTGGGGATTCTTTCCTGTTTTTACTGCAATATTCACATTTCCACAAGAGAGAGCAATGTTGACAAAGGAAAGGGCAGCAGATATGTACAGATTAAGTGCATATTTCCTAGCTAGAATTACAAGTGACATTCCACTAGACTTGATATTGCCAGTGCTTTTTCTCCTTGTTGTTTATTTCATGGCTGGTCTTAGACTAAGTGTTGCCCCCTTTTTCCTCACCATTCTCACTGTTTTCCTCTGCATCATTGCAGCTCAGGGTCTTGGACTTGCCATTGGAGCAACACTTATGGACTTGAAAAGAGCAACAACTTTGGCTTCAGTCACTGTCATGACCTTCATGCTTGCTGGAGGATTTTTTGTGCAGAGAGTCCCCATATTTATTTCTTGGATCCGCTACATGTCCTTCAACTACCACACCTACAAACTTTTACTCAAGGTGCAATATGAACACATAACACCTAGCATAAAAGGAGTCAAAATTGACAGTGGTTTAACAGAGGTAGCTGCTCTCATTGCCATGGTCTTCGGTTACCGTTTCTTGGCATATCTTTCTTTGCGCCGAATGAAACTTCAAACTGGATCTTAA

Protein:

Promoter(3k):

>AM02G020030.1
TAGCTAGTACATGTACATTACAGTACCCCTATACTATTTTTTAATTAATTCTGCAGAACTCATCAATCACAAACACCATTTTGGAACACTAAATTCCAAAAACTAACTTCCCTCTTGTATAGGTAATCTAGAAATTGCAATTGCAAGAACGTACTCAAATGCAGAGAGGGTCTCTTGGTTCACAGTACATAGTTTCTGTCTGTATTATAAACCTACTTAATTAGACGGCACATGAGCCATTACTTGCTACCCCTCAATGCATATAAAGTTAAAAATTCCATCTCATCAATAATAAAAATATGTCAAACTCGAACTATTTGAAAGAAACCCTCAATATGCCTCCAGAAAGTGGTGGCTTTTAAGGTCCACATATCTGACATTTTGTGTATCATACACAAACCCAATCTGACTTATAATTGGCAGTTGCATCAGTTTATTTGTTTTTATGTTTTTGGCCTACAAGTTTCACGTATAGTAAAATATACCCTAACAATACCTGTAATTGTAATTAAAGCATTGAATGAATTATTGATTTTGTTTCACTTTAGTCTCAAAACAGTCTTTATTGATTTTGTTTCACGCATATAGCTTGAGTTTTTGCTCAAATTTCGTTTTTCTTGTTAAGTGTGTTTCGTCCTAAATCGTTGGTTGCATCTTGTTCATTGTGAAATTTGTAACATAACACACCTTCATTTCAGTGGATTTGAGCAATATTTGCTCCATTTCGAGCCCAAAAACCGTAACACCAAAACATTTTTAATTTCACTTTCGTTCTCGATTTTTGATCTTTTTGGTGAATTTTGTTGTTAAATATCACTTACTGAGTTGATTTCGCATCTATTTCAAGTTGTTTCATGAATTTTGGTTGAGTCTTGAGCAATATACCATAGTCACACAAGCTTAAACGCGTTTTTGCTCTAAAATCGCGTTTCCAGTAAGTTCTTGTCTTTTTTTGTGCAAATTGATCATTTATTCGTGTTCCTTGTGAAATTTCGCACAAAATGGACTACTCATTTGCTTAATTTGGTTGAGAATTGCAATTTCTAGAAATTTTGGTTTGAAGGTTTGAATCTTCATCTTCAACCTTAATTTTTCTGAATCACTTTTCTATATAAGTGCTGGTTAGGTTCTGAAAGTTGCATAGTTGAATTCCTTGTGAAAAATTAAGTGAAATGGAGTCCAATTTTGTCCGATTTGGTTGAGTATTAACTGAGATATCCACATTTTAGGAAATCAATCATTCACTTATGTTCTTGGTGTTATTCATTTCCAGAATTTCTTTGATCCAAAATTGTTTGCTTAAAACTTCAAATAGTGTTTCTGGATTCAATATAGCTCTGTTTACCTTGATTCAAAAGCCAATTTGTTGGTCTCAAATTCTAGTATTATTTGAGATATTGAAAAAAAATTCAAAAAAAGAAAATACTGAAAAGTAAAAAAAATAGCAAAAAAAGTATTATTGTCAAAAAAAGGCATCAACCTAATTACGGAACATGAAAAGAATTCCAAAAAAAATCGAGAAAAATTCCTATTGTTACTCAACTTTTTTTTTGGATCAATGAGAAATTTTCTCAAATATTTTTTTAATTAAAATAGAATAACGATTAAAATAGATTAACAGTTAGTATAATGGACATTTACTGTTTTTTAATTTTTTTAGCAAAACATCAAGTTTATGTTGTAGACACGTGCATAAATATTATAATAGACATTTATTATTTTTTAATATTTTTTCTCGTCATTATAACAATTTAAAATAAAATAATGGTTAGTATTATTTTTAACATAATTATTTTTATTTTCGTTTGGGACATTTGTGTAATTAGGTACTAAAACAAGTCCTTTATAACAATTGCATCAGAGTTATGCTGAAACCTTTTCAATAATTAACCTTTCTTCCATCATGACCCTTCAATAAATATAATATATATCAAGGGTTAATAAGGCTTTTGTGTATGATACACAAAATGTCAGACACGTGGACTGTAAAAGCCACCCCAGAAAGTTGCTACACTGTCATGTTGTCCCACGCTTAATGTACAGAAAATAGTCAAATTATGGCTTGACTTACCGTGCATGAAATGGAAGGTCCATGGTATCTTATCATGATCATGCGCGTCATATATATGTCATATGTATGTATAGAGCTGTTAAACTAGGCCGCCCAGTCCACCGTGCCAAAATGTAAAAAATGGATTGGATTAGGTCTGTGCAATTATCTATTGGACTGTGATTTTTGTAGCTCAGCCCAAAAACTAGGCTAAGAGTCTGGCCCAAATCTTTATTTAACATAGAAACCACAAAAATTATACAAAAAAACATATGCCCAATCTCGCCTATAAGCCAATTGGTTAGGGACCAATTTAGGCATTTACTCATAAAAAAAATACCAAGGAGGCTAGCTGGATGATATTTGCAAGAAGTAGAAGGGTAGTTTGGTAACTTTATATATGTCCGTTAAGCTCTTTATAAGAGGGTGAGTCCAGTAGAAGATGTGATATATTGAATTTGATTGTTGCTCCCCCACTGAGTTAAAGCTTAATTGGTCTCATATTCCATTTTCATATCATATCATATCTATCACCCCCAAAGCTAGAAACACCCAATCCAACTCTTATTTCTCAAGGTATTGTATTCTCCTTTTACCCCAATTCCTTTTTCAGCAAAAACACAAGAAGAAAAAAACTAAATGGTAGTCTCTCTCACTACTCTATATACTAATAATTAGTCTAAAATATAGTACCTATATACTATTAATTAATATTACTTCTTATATCCTAACTAAGAGTATATTGTAATATATGTTGAGCATGTCTTTCCTACTATTTATTACACAATAATAGTCTAGCTTTCTGGTATTGGTCTTTGCTAAAATATGATATGATAACAATATATATATTGAACTTACACAAAATAACAAATTGAATGAATATTCATGTTTATTTCTTGATCGAACATCATATTTTTTTGACGGTTCAATTAATTACAGAGGTGGTGATT

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF01061.27	ABC2_membrane	492	701	5.20E-42
PF00005.30	ABC_tran	171	323	3.10E-28
PF19055.3	ABC2_membrane_7	352	414	9.70E-17
PF19055.3	ABC2_membrane_7	555	654	9.70E-17

Gene family

Gene family	Subfamily
Transporter family	ABC

Gene Ontology

GO term	Description	Category
GO:0140359	ABC-type transporter activity	Molecular Function
GO:0055085	transmembrane transport	Biological Process
GO:0005886	plasma membrane	Cellular Component
GO:0016887	ATP hydrolysis activity	Molecular Function
GO:0005524	ATP binding	Molecular Function

InterPro

InterPro term	Description
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR013525	ABC-2 type transporter
IPR017871	ABC transporter-like, conserved site
IPR003439	ABC transporter-like, ATP-binding domain
IPR043926	ABC transporter family G domain
IPR003593	AAA+ ATPase domain

trEMBL

trEMBL term	Description
A0A1S2Y2V5	_

SwissProt

SwissProt term	Description
AB22G_ARATH	ABC transporter G family member 22

KEGG

KO	Description	Enzyme
K05681	ATP-binding cassette, subfamily G (WHITE), member 2

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G06530	ABC-2 type transporter family protein
Medicago sativa L.	MsG0180003146.01.T01	_
Oryza sativa L.	LOC_Os03g06139.1	ABC-2 type transporter domain containing protein, expressed
Cucumis sativus L.	Csa002500	_
Glycyrrhiza uralensis Fisch.	Glyur000297s00023405.1	_
Codonopsis lanceolata	Cl_chr04_54940T	_
Arachis hypogaea L.	AH12G33920.1	ABC transporter G family member 22 like

Expression pattern