Gene detail

Detail information of Am02G019500.1 Annotation

Gene ID	Annotation
Am02G019500.1	ubiquitin E2 variant 1D-4

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am02G019500.1	mRNA	Chr02	137718027	137720843	+

Sequences

CDS:

Protein:

Promoter(3k):

>AM02G019500.1
ATGACGAAAGATAACCTGCAAGAAGGGAGCATGAAAGTCAGGCCATCGAAGACGACCTACGGAAAGGGACTACATGATCGACCCCGGGTCTGACACCCCCTCCTCACCCATGTTAAGAAGTAAAGAAGTGCGATTTAAATTAAAAGCCCAAGAAGAAAGCTAGATACCTGGAGCGGGAAACGATTTCATCGCACTAGCTATCACCAGAATAAGGCGATCGGAAGTTAGGTCGCGCCGGAGTTTGAAGTCGCTTATATAAAAAAAACACCTTGCCAGAGTAGCTGGAAAGTAGATCGCTCGTCGGAGAAAGAACTTGTCCTCAGAGCAGGAATTTCAGAAAAGAAACAAATTAGTAAAAGGGGTGCCCCATATTTATAGGGAGGAAGAGCCAGAACGCGAAGGGGCACGTCCCTTCCCCTTCTAAAGTGATGACCTTTCTCGAAAATTGAACCGTCATCATTACACGCCCCCTTTGGGAAGCGTGAAGCATTATGACAGTCCCATCGAAGCGTCACGCTTGTCCTTTCAGAACATCATGACTGTCAGAATACCACGTCGCTAGACGGCGCGAGCATGCTCCATCGAAACGGGCATACGATCAGGTCGTCTCAGCGCAGGCGACCAAAGGAGATGCAGCTCGCCTCACCAAAAGAAATGTGACTCTTAGGCCTGAACCCGTCCTAATGAACGACTTCGGCCTGGGGGGAAACTGTTCTGGATTGGGCCGCAGCCCATGAAGAATATTGGACCGGGGCGAGCGTCCCAGTAAGCAACCAGCGTTACACGACGTTTTGGATCGGGTCGCGACCCGTTAAGAAGGTTGGGCCTCTGCGAGCGGCCCAATAGCGACCAGGCGCCACCTTATGCCCACGATGGGAAGATCTACGGCGAAGAGGAATTCTCGCAGGATCCGATGGTCGCCTACAGCGCCCCAAGTACTATATAAAGAGTCCCTGACATCACATGAAAGGTACGTTTTTGACCAATACTATTATACTAAAGATCACCCCATTGACTTGGGCGTTGGAGTGCCATCGCAGGTACACCCTGAGGGAGCTCTGCACGCGACCAGCCTTCATACAAGAACGACCTCAATACCTGGCACCAAGCCCCCAAGACAGCACCAGCACAGATAGACTTACTACAATAAGAGAACCGATCGCTCAGAGAAGAGTCCGGTTCAGGTACCCCGAATATCCATAGGTATTTCTTAATTTTACTTAAAATTAGGAAGGTGAAGCAAAAAGAGTGATGTGGAGAACCTTATGCGTGAGTTTGTTCTGCTCCGCTTTTAACCGCCTAAGTCAACAAAAGTCGACTCGGTTAGTTGAGTTGGAATCGAGTCAACAAGACTATCAATGAGCCTCCCAAAGCCACCAAGCCAAACATCCTTTCAGAATCAAATCGTTTCTCCATTCCCCAGGCACCATAGTAGGATTTTGAGTGAGAAAAATGATGGCTGCTTGGTCTTCTTGATGAGTGCATTTTGGGTGAATCGCTAATCATCAACCCTGTGTTGTAAGATGATTTTTAACATGCAAACCTACAAAACCCGCACCATGAGGAATCATATCGCCAGCTTATGGCGGTTTAGGAAAGAGGTTGTCATTTAAGAACTTTCAATTCAAATTCTTGTGAGCTTGACATCGAAAATCACGGCAGGCAATCCATCGTCTTTTGACAACCACCATCTAATCACACATAGGCTCAAAACAGATGATGTCCCACAACAAAACCATCTATTCTTTGTTCCCCTGTAGATCCAATTTGTGGTTAACCAATAAGTTTTATGACTAGTGATGTCAACGGGGCAGGGCAGTTCCTGGGTAGTAGTCCTTCATTACCCATCCAATGGGTAAAAATACCCTCATACCTCCCCCATATCCACACGGGTATTTGCAGATATCCACAATATTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTAAATCTACTTAAAATAATTTTCCATAAAACAAAAATAGTTATGCACACAAAATTAACTTTTTTAATATTTTATTGTTATTCATATAATAAAATTAGCCATTTATCCTATTAAATATTTGATGATCCAAGAAAGTTTGTAATGATCCAAGAAGAATCAAGTATCGACCCAACCCAAGAGAAATAAACCCAAAATACCCAAGAAAGCATGTGACCTAAGAAGAAGCATCTAGTAGATTTTAGAAGCATATGAGTCACCATTTTATATTCTTTTATTTTGTCTTTTAGTTAGACATTGGATTCCTTATTTTTTTGGCACATTATGTATTTGAAGTGCTATATATATCTTGAATGTAAAAGACAAATCCATCAATGAAAAATAATGTTAAGAGTTTTTTTATTTTTTTAAAGGAGATCTCCTCCCTCGAAAGAAGCATTTTATTTTCAGTCATTGTGTTTTGAAGGTTTACCCATTTTTGAGTACCTTACATAATAGCTTCTGCACCGCAAGTATATATGTATTGAAATAAATGAATACATTATCATACAAACTCACATTAATTAGTAAATTAAAATTTCAAAAATTCAACAAATTAATATATTAATTTTTAAAATTTTAATATAAAGTAAAAAAAAAATTGACAAATAAAATAACTATTTAAAATTTATTAAGTTTTTTTTTGGTCCAAAAAATTTATTAAGTTAATTTCAATAAATTATAGATATAATAGATTAAGATTTTTTTTTCAATAAAAATATAGTGGGCCGAAACAAAATGGACCCTCTGCCCTCTGGCCCATAAATAAAAGTGGAGGAGACCATTGATCATCGCGAAAATCCTCACCCCTTTATCATCATTCTACTAAATCCCTCTTTCTTTATTCCAACATTTGCGTTCGTCGTCCCCTTCCATTTCAAGATTCCCATTCTTCTCTTCGCCCCTCTTTGCTCTCTCAGCTCAACAATCTTCTATTTTCCGATCAGATCTGCAACTATCACCTCAGCAAGAACCTCTTCCATCCATCC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00179.29	UQ_con	43	138	1.30E-14

Gene family

Gene family	Subfamily
Ubiquitin Family	UEV

Gene Ontology

GO term	Description	Category
GO:0070534	protein K63-linked ubiquitination	Biological Process
GO:0005634	nucleus	Cellular Component
GO:0004839	ubiquitin activating enzyme activity	Molecular Function
GO:0006301	postreplication repair	Biological Process
GO:0016746	acyltransferase activity	Molecular Function

InterPro

InterPro term	Description
IPR016135	Ubiquitin-conjugating enzyme/RWD-like
IPR000608	Ubiquitin-conjugating enzyme E2

trEMBL

trEMBL term	Description
A0A9D4W764	_

SwissProt

SwissProt term	Description
UEV1D_ARATH	Ubiquitin-conjugating enzyme E2 variant 1D

KEGG

KO	Description	Enzyme
K10704	ubiquitin-conjugating enzyme E2 variant

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G52560	ubiquitin E2 variant 1D-4
Medicago sativa L.	MsG0480023928.01.T01	_
Oryza sativa L.	LOC_Os09g12570.1	ubiquitin-conjugating enzyme, putative, expressed
Cucumis sativus L.	Csa002547	_
Glycyrrhiza uralensis Fisch.	Glyur002009s00041783.1	_
Codonopsis lanceolata	Cl_chr04_39720T	_
Arachis hypogaea L.	AH12G35110.1	Ubiquitin-conjugating enzyme E2 variant 1D like

Expression pattern