Gene detail

Detail information of Am02G018880.1 Annotation

Gene ID	Annotation
Am02G018880.1	heat shock transcription factor A3

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am02G018880.1	mRNA	Chr02	135278382	135280451	+

Sequences

CDS:

>Am02G018880.1
ATGAACCCAAACGATGATAACTCCTTCGATTCCACGATGGAGTTTGGTGGTGGTTCTGTGCCTGTGCCAATGGAGTGTTTGCACGGGAACCTTGTTCCTCCATTTCTGTCTAAAACCTTTGACTTAGTTGATGAACCTTCTCTTGATCCTATTATATCGTGGAGCTCCACTGGTGTTAGCTTTGTCGTTTGGGACCCTTTGGAATTTGCTAGACTTGTGTTGCCTCGTCATTTCAAACACAACAATTTCTCCAGTTTTGTTCGACAGCTTAATACTTATGGATTCCGCAAAATCGACACTGACAAGTGGGAGTTTTTCAATGAAGGTTTCCAGAGAGGGAAGAGGAACTTGTTGAAGAACATCCAAAGGCGAAAATCACCTCAATCTCAGCAAGTTGGATCTTCTTCTGATGCAGGGAAATCTAGAGTTGAGGTTGAGATAGAAAGACTGAGAAAAGAGAGGAGCGTGTTAATGCAAGAGGTGGTTGATTTACAGCAACAACAGCGAGCAACAGCTCACCACGCCGGAAAAGTGAACCAAAGACTTCAATCTGCAGAACAAAGACAGAAACAAATGGTTTCTTTCTTAGCTAAGTTGTTTCAGAACCCGGATTTCTTAGCCCGCCTTAAGCAGAAGAAGGAACAAAGAGATATAGAATCTTCAAGAGTGAAAAGGAAGTTTGTCAAGCAGAACAAACATGAAACAGGAACAGCAGAAAATCTTGAAGATGGACAGATTGTAAGGTACCAACCAGATTGGAAGGAGATTACCATGTCTTCTGAAACTCAAGAACTAAGTCCAGTTTCCATTGAACAGTCTCCTCAGTACCTTCCACAGAATTTGGCAAGAGAAATGAGTGTGTGTGCAGATGATTTGACTTCTCAAATTGAGAATCTTGCATCAGATGAATTGGCTGCAATGCATGGGATTATGCCAACTCAAGAAGCCATTGCATCAGATCCTCTTTTCAGAGGGAAAAATATCATGAGCTCAAATGAAGAAGTATTTCTTCCTGAGTATTTTGCTTCTTTGCCTGAGGATTTGACTAAGGAGAAAGGCTTTCAAGAGTTTTCACCTCTTGGAAATGAAAACATTATTAAGCCAGAAGATATATGGGACCCTAACTTCAATGTTAGTGTTGCTGTTTCAAGCTGTGAGAATGAGCTGTGGGGAAATCCTATGAATTATGGAGTTCCAGACTTTGATATGTCAGATTCAGACATATTGGATATTGGCTTAGGAAGTTTGAGTATGGATAAGTGGCCAGTTGATGAATCTCCTTTTGATGAGACTGATATTCCAGCTGGTCAGCCAAAAGATGATAGACTTATTTAA

Protein:

Promoter(3k):

>AM02G018880.1
GGCCTCTCGAAGCGCCATTTTTTCACTCTTTTTTCATACTTGTAAGCAGTAGAATCACCCAGATTCTCTGCACTCACAGAACAACATTCATCAATATATACAATACACAGTTACTTCCATTCCTTCCTCTGTTATTGTGCAATTTTCTTTCCTTTACTAAATTGATTGTATCAGCCTTGCAAACAGCAATGGTTGCCAATAACAAAGTCCTTCAAAAGCGTCTAGTCTCTTGGCTTGCTCCTCGAGATAGCTTTGTGAAGCTTAACACTGATGGTAGTAGCTTCGGTATCCTAGGGAGATCAGATTTTGGTGGTGTTCTTAGGAATTCTAATGGTGAATGGCTTTTGGGTTTTTTTGGTAACTATGACATTACCTTCAATATTAATGTCGAGCTTCTAGCCATTATGAAAGGTCTTATTTTAACTTGGGAGAATGGCTAAAGAAATGTTATTTGTGAATCTGATTGTCAGACAACTTTGTCTTTAATCAATGAGGGTGTACCCCATACTCATCCGTATGCTCATCTTGTCTCCTTCATCCGCGAGTTCAAGAACTATAATTGGTCTCTTTCCTTCGTACACACTCTGCGGGAAGGAAATCACGTTGCTGACTGGTTGGCCAAGCATGAAGCTTTCTCGAGTCCTGACCTGTTCTTTTGGCGTCATTGTCCGGTTGATTTACCTTTGACCCTTTTAGCTGAAGCTATGGGAATGCAATATAGTAGAGAGTAGTTTGCTTTGTTGCCTTTAATTTCTTACTGATAAAAAAAATATCCTAAACGAGAGTTAGTAACACTCTCTTACCAACACTCATCTCATGGTTAGTTAAAATTCACGTGAGTCAATATTCAAAAAAAAAAAAATTCACGTGGGTCCCATTAAGTTAATGAGTTTGATTTTCAACTTGTATTTTTTGTTTAATTTAAGGTAAAATTTGTTTTTAGTCCGTATAAAATTTCTCAATTTCCTTTTTAGTCCCTATAAAATTTTTTATCGATTTTTTGTCTCCACCATATATTTTGTCATGAGTTTTAGTCCTTATAAAATGACAATTCACCTTCAAGTTTTTGAATAATATTTTATATACATATTAAGAATATTATAACCATCTCTCATAAAAAGTTAATATTTTTAACAAAAGATGAATTAAATATTAATTTTTAAGGGCTAAAAACTTAAAAAAAACAAAATAAAGGAAATATGAATTTAGAATATATATGCAAAGTTTGATATCATTCTTTTTTTTGTCTACTAAATGAAATAGCAAATAACCACCACACACACTACCACTGTTCACACCCAGGTTGAACCAGAGACCCGACGTCACAATGTTGCTGAAATCAGTGTTATCAGACCCGGACCGGCCATCAACCCGGTCAAGGCACCGGGTCACTAGACCCGGGGTTGGACCGCGGGTCTTTAGTCGGACCGGCATGACCCGGTCTATATTAAATAAATTCAAAAAGTTATAATATATACTAAGAAAGTATACATTTATTAATATAGAAATTTTATTATAATTTTATTTATAATTATACATTTACTAACATGTTTATGAGTGTTGAACTTGAATCAATTTGTCAAAAAAATGTGTGTTTAATCAAAACTATTAATGAAAGAATGTGCAAAAAAAATTAACATATCCGGAATTGATTATATTTAATGAATGCGGGATAGTATCAACAAATAATAGATAGCTTAGTGGTTAAAAAGTTGAAATGTTGAATACTAGGGAGGGGGTTCGAACCCCACCCAAGCCTTTTTTGTGAAAACATGCAAAATTTATAAATGGTTCATCTTAAAAAAAAAAAAAAAGGATCAACCGGTCCGACCACCGGTCCGACCCGGTTTTCACCGGATTTTCACCGGTCCGATGATGTCATCACCGGGCCAACTGCAGATCCGGTCCTGCACGCTGCCCGGCCCGGGAAGACCACCGGGTCCCGGTCCGACCGGTCCGACCGGCCGGTCCGGTCCGGTTTTGATAACTATGGCTGAAATTGCCAAGACAGCCAACAGTGAGAGACAGTTTTATATCATTCTGACAATACTTAAATTTATTTTGATTTCATAGGAACTAAAATGTCTGACCAAAAATATTGTGGGGACTAAAAGTAGATCAAAGATTTCATAGGGACTAAAAATAAAATTGTGAAATATTATGGAGCATAAAACATAATTAACCCTTTAATTTATAGTGAAATGAAATATCTTGTTTTGGTATAAAAAAATCTGCCAAAACAGAAAATATTAGTAGTATTTTGATATTTTCCTTTGTTTGTCACCGGAATTTATTATTTTGTAAAAAAAAAAAACTAAACTTCAGTTGGGCCCTTAAAAAATCGTCAGAAAGGCACAACACACGTCCAAAAAAAAACACAAAACCGAAAGCAAAGCAGAGTTTGCGATTGGGTAAGCTGGTTTGCTTAGCCTTTAAGTATTATTTGACCAAGACCAAGACAGCACACGTCACTGTTGAGCCAAAAAAAAAAGACAGCTCACGTCACTCTCAATCTAATTGGCCAACAATAAAATCCAACCAAACATAAAACAACAGTAACACAAAACAACAAATAAAAAAAAAAAACAGTAACACAACACAGTACTACAGTATCTTGTGGCAACAAAATATCTAGTCAAGTAACAAAAAAATCAAAAAAATCTAGTCCACACGTGGTCTGAAAAACCCGTGACAAAAAAGAAACAAGTACAGCCATCCCCAGTTAGCAACCAACAACCTAACTGCAAGGAAACAACCTCAAATCCAATGTCGGCGCTTCTCATATTTCCCCATTTGCTATTCGCTATTGCTATACCCCACCATTGAAATCATACTTCAACTTCAATGGCCCTTCTCTGCCACCGCCATCAAACAGTCACCACCTTCCACCGCCCTTCAACTCTTTTAATATTCACCACCACCACCACCACCACCACTTCTCATTATCTTACTCCCCACGAAACCAAAAACCGTTTTTTCTGTTACAGTGCTCAATACAAC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00447.20	HSF_DNA-bind	35	124	4.80E-31

Gene family

Gene family	Subfamily
Transcription Factors Family	HSF

Gene Ontology

GO term	Description	Category
GO:0005634	nucleus	Cellular Component
GO:0006357	regulation of transcription by RNA polymerase II	Biological Process
GO:0016020	membrane	Cellular Component
GO:0003700	DNA-binding transcription factor activity	Molecular Function
GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	Molecular Function

InterPro

InterPro term	Description
IPR036388	Winged helix-like DNA-binding domain superfamily
IPR036390	Winged helix DNA-binding domain superfamily
IPR027725	Heat shock transcription factor family
IPR000232	Heat shock factor (HSF)-type, DNA-binding

trEMBL

trEMBL term	Description
A0AAN9M538	_

SwissProt

SwissProt term	Description
HSFA3_ARATH	Heat stress transcription factor A-3

KEGG

KO	Description	Enzyme
K09419	heat shock transcription factor, other eukaryote

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G03720	heat shock transcription factor A3
Medicago sativa L.	MsG0180003410.01.T01	_
Oryza sativa L.	LOC_Os02g32590.2	HSF-type DNA-binding domain containing protein, expressed
Cucumis sativus L.	Csa005086	_
Glycyrrhiza uralensis Fisch.	Glyur000798s00031099.1	_
Codonopsis lanceolata	Cl_chr04_06780T	_
Arachis hypogaea L.	AH12G35750.1	Heat stress transcription factor A-3 like

Expression pattern