Detail information of Am02G018860.1 Annotation
Gene IDAnnotation
Am02G018860.1 demeter-like 1
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am02G018860.1mRNAChr02135184087135195038+

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF15628.9RRM_DME199920996.50E-55
PF15629.9Perm-CXXC196419951.70E-09
Gene family
Gene familySubfamily
Epigenetic RegulatorsDNG1

Gene Ontology
GO termDescriptionCategory
GO:0019104DNA N-glycosylase activityMolecular Function
GO:00515394 iron, 4 sulfur cluster bindingMolecular Function
GO:0003677DNA bindingMolecular Function
GO:0046872metal ion bindingMolecular Function
GO:0016829lyase activityMolecular Function

InterPro
InterPro termDescription
IPR028924Permuted single zf-CXXC unit
IPR003265HhH-GPD domain
IPR023170Helix-hairpin-helix, base-excision DNA repair, C-terminal
IPR003651Endonuclease III-like, iron-sulphur cluster loop motif
IPR044811DNA glycosylase, plant
IPR011257DNA glycosylase
IPR028925Demeter, RRM-fold domain

trEMBL
trEMBL termDescription
A0A1S3E5Q2 _

SwissProt
SwissProt termDescription
ROS1_ARATHDNA glycosylase/AP lyase R1

KEGG
KODescriptionEnzyme
------

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT2G36490 demeter-like 1
Medicago sativa L.MsG0180003412.01.T02 _
Oryza sativa L.LOC_Os01g11900.1hhH-GPD superfamily base excision DNA repair protein, expressed
Cucumis sativus L.Csa005084 _
Glycyrrhiza uralensis Fisch.Glyur000075s00007175.1 _
Codonopsis lanceolataCl_chr07_14980T _
Arachis hypogaea L.AH06G17160.2Transcriptional activator DEMETER like

Expression pattern