Gene detail

Detail information of Am02G018790.1 Annotation

Gene ID	Annotation
Am02G018790.1	Leucine-rich repeat protein kinase family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am02G018790.1	mRNA	Chr02	134940172	134943073	-

Sequences

CDS:

>Am02G018790.1
ATGATGAACCATGCGTTATCCTTCTTCCTCTTGTTCTGCTTCTACCTAGTAGTACCGTGTCTCACACATAATGACACCCAAGCACTCACTCTCTTCCGCCGTCAAACTGACACACACGGCCACCTTCTCTCCAATTGGACTGGCACCGACGCCTGCTCCGCCTCATGGAACGGTGTCGTTTGCTCCCCAAATGGGCGCGTCACCACACTCATACTTCCTTCACTCAATCTCCGAGGACCCATCCACGCTCTCTCTCCTCTCACCCACCTCCGTCTCCTTGACCTCCACGATAACCGCTTAAACGCCACCCTTTCCACTTCTTTCCTCTCAAACTGCACTAACCTCAAACTCCTCTACCTCGCCGGCAATGATTTCTCCGCCAACATCCCGCCTCAGATATCTTCTTTAAACAACCTCCTCCGTCTCGACCTCTCCGACAACAACATCGCCGGCGCAATTCCCGACCAAATATCCCGTTTAACTAAACTCCTCACTCTCAGACTACAAAACAACGCTCTCTCCGGCAAAATCCCCGACCTCTCAACCGCTATGCCAAACCTCACAGAACTCAACATGACTAACAACCAATTCAACGGTCACGTACCAACCTCCATGCTGAAAAAATTCGGCGAAGAAACCTTCTCCGGCAACGAAGGTTTATGCGGAGCAAAACCATTCCCGGTTTGCTCCTTAACGGAGAACAACAACCCTCCTTCTCTTCAACCACCACCGGAACAAACCGTTCCTTCAAATCCAAGCTCGTTTCCTGAAACAAGCGTAGTCGCAAGACCAAGAACACAACCTCGTAAAGGGTTAAGCCCTGGTTCAATTGTTGCAATTGTGGTTGCAAATTGCGTTGCATTGGTTGTGGTAACATCATTCGTTGTTGCTCATTGTTGTGCTAGAGGAAGAAACTCTAAATCGTTAATGGAGGAGAGTGGTGGGAAGAGAAAGAGTGGGAGCAGTTATGGGAGTGAGAAGAAAGTGTATGCAAGTGGTGATAGTGATGGGACTAGCAGTGGCACTGATATGAGCAAGCTTGTGTTTTTTGATAGGAGGAGTGAGTTTGAGTTGGAGGATTTGCTTCGTGCTTCTGCTGAGATGCTTGGGAAGGGTAGTTTGGGAACTGTTTATAGAGCTGTGCTTGATGATGGTTCTGCTGTTGCTGTTAAGAGGCTTAAAGATGCTAACCCCTGTGCTAGGCATGAGTTTGAGCAGTATATGGATGTAATTGGGAGGCTTAAGCACCCTAATATTGTTAGACTCAGAGCCTATTATTATGCCAAGGAAGAAAAACTTCTTGTCTATGATTATCTCTCCAATGGAAGCCTCCATGCTCTTCTTCATGGGAACCGTGGTCCAGGAAGAATACCATTGGATTGGACTACAAGGATAAGCTTAGTATTGGGAGCAGCGAAAGGGCTTGCTAGGATTCATGCAGAGTACAGTGCAGCTAAAGTGCCACATGGGAACGTGAAATCATCCAATGTGCTACTTGACAAGAACGGTGCAGCTTGCATAGCTGACTTTGGGTTGGCACTATTGTTGAACCCTGTTCATGCCATTGCAAGATTGGGAGGGTACAAGGCTCCTGAACAGACACAACACAAGAGGCTCACACAGCAAGCTGACGTGTACAGTTTTGGGGTGTTGTTGTTGGAAGTTCTCACTGGGAGAGCTCCTTCATTACACTACCCTTCACCCGCTCGTCCTCGTATGGATCATGACGACGAACAAGTCGGGGTGGCCGATCTTCCCAAATGGGTTCGCTCTGTTGTGAAGGAAGAGTGGACTGGAGAGGTGTTTGACCAAGAACTCCTACGTTATAAGAACATTGAGGAAGAGCTTGTGTCGATGTTGCATGTTGGGTTGGCATGTGTTGTGCCACTGCCAGATAAGAGGCCAACCATGGCAGAGGTTGTTAAGTTGATTCAGGATATAAGGGTGGAGCAATCTCCTCTTGGGGAAGACTGTGATGAATCGCGCAATTCGCTTTCCCCTTCAATTCCCACCACTGAAGATGGACTAGCTTAG

Protein:

Promoter(3k):

>AM02G018790.1
GTGAAAAGTAAGAAATAGAGTGTAAGAATAAAGAGAAAAAAAAGAAGAAATAGAGTGTATTTGAGGTGTCTTTTAGATAGAATGAGGGTATTGGTAAAATTATATGTGGTGAATTTGTATAAATCTATAGTAAATTAAGAGTTCAGCCTATTGGTAACTTAGTATAGTCATATTGTCTAGGACCCAAAATCAACTCTTAACATAGGCGTATTTTTGCTGTTTTATTTCTTAATTGGGATATTTGTAAAAAAACAAGTAAAATTGACCTTGCTGGAAGCGCATAGTTCACTATGGGTAAAATCGCAAAGATTAAAAATATATTTAGTAGTTTTGTTTTATAAACAGTGGTACTATAGTAATTTTACATGAATTTTTAGGTCGGGCCGTGGCCCTACCCAGCCCATACTGAGATCCGTCACTGTACTTACGACACAAAATTGGCGTTTCTAAGGGCACTCTAATCTTGCGGGGGCATGTTGGGAATTAGTATTATCGAGAGTTGTAGCAAATACATTCATGCACATAGTTAGTCGTGTGCCTAGGTAATATCATTATCATTCACGCACTTAGGAAGCAGTAATATCATTAATTTCCTTGTAACTGTAAACTATATTTATTGTTAAGAGTGTATAAATAAATGATCAGCTGAGTGCAAATTAGTGGAGCATTTCAAAATTTTATATCTTTTATACAAACCACACCCTTTATCAAATACACCTACCATGTAATGCCTAATATTCATCGATCACAATATAGATATTCTTTCTTTTTACCAAACAATATAAATATTCTTAAACTTCAATTGCACACCTTATTTTCCTTTAAGCACAGCAGAAAAACAGCTCTCAACGACTCTTTTTCCTTCTGTACTTGTCCATACCCGTCCTTCCATGTTCCAACTTTCCAATTCTCCCCTTATGGACACTTTCAAATCCATTTATGCGATCCATAAGCCTAATGGCCCAAAAGACTTAATTATCCAAGTTCGCAATTCTTGGTGTTCTGCTAATCAGTTGACAATTGCTATTATTTATCTAACTCAATTTTGCTATCATTATTGACTGGCCCAATTCACAAAATTGCCATTTCTTCTCTTTGGTTTTTCTCAAGCCAAATAAAGTGAAAAACTATTGAGAATCTATATGACTGTTAAATTTGGTATGCTTTAGCAGTGCTTGTTGTTTGTTGTTGCTGCAAACACAAGTAAAAATTAACAACAGTCTTTGTGATCTGACAATGTTTTTTGTCTCTATTTAATGATTCTTTGTCCTGACATGAAGCACACTTCTTGGATCAGCTAAAAATAATTACTGTCACACTTGGTTTGTCACAGATATCATACGCATGCTTGATATTGATACCCTTAATATGTTGCAAAATAGACAGTTAAATTGGACAGTAATTAAAATCTTCACTTTAGATTTTAACTAAGCAGAAAGTTCTTAAACCATGTTTTTAGCTCATTTTCCAATATGATGATTAAAGCAATTGAAAGAAAAAAGCACAGATTTTGATTCCCTACATGCAGTGCAGGTGTAGTGTAGTACTATTGTGCTTTTTCAAGTGTTGTTGCTGACTCAATAATAAGTGAGTGGCGAAGTTTTAGATTTGGAACGCCAATCTCGCCTTCAATCTCTGTTACTTTGTTTTTTCTCTTTTGCTTTTGCATGTTCATTGGGCCAAAAAGTTTAATGCAACAACTAACCAAAAAAAAGCTGAAACAATTCCCTCCCTTTTTGCGACAGCATGCATTACCAACCACTGAAGGACGGAAATATTTATATTGGTGTAAATTCGTAACAAATAGTAAAAAAAAAAGGTATGTTCAATTTAGATTAGTTTCTAACTTATGGTAAAACAAGTTCACTTACTAAAAAGTGTTCATAAAACTAAAGAAATTAAAGACAGAATTTGTGTAGAATCCCCAATTTCAATGACAGTATATGTATTTTCTGTTATTTTTTTTGGATATATTAAATTATCTGCTAAATGACCTAAACTCTTTCACTTCAGATATATGGTATGACAAAAGCTTTGCTTGCTTATGACTGACTTAAAGTGGATACCTCTTTTTTCTTCCACGAGGTAGAAAAGAGAAGCAGGAACCAGTCACTTTTTTTGATAGCTCAAAAGTTTATCAGATTAAATAATAAATTGTTTTCATTCTGGTTAAATATAGGAGTATAGTCAAGAAAGTCAATGGCTAAGTGGTCCACAGCTAGCTCAGCATAGGATTGTTAAATTTGTGGACCATTGAATTTCAATTTTCAAATGGTTCTTTTTTCCTCCACCAGAAGATTTCAAAAAATAAATTCACAGCTTGCAGAAAAAAGGTGATAGCAAAAGCTCAACCCAATATAATGTTGCATTCACCCAATTTCAATTTAAACTTCCAGTTTTCTCATCCAAAAAATCAACTAGGTAGGCTCTCTGAATCTCACCACAACAATAATGCAGCAAAGCAAAGGGATATCATTATTTGTACTAGTACTTGTTCATATCACCAGTATCAAGAAGCATGACATTTAACTTCTTTTTCCCCCTATTGAACAACAGAGCAAGAAAAAGAAAAAGAAAAAGCAAAATGTGGTTGATGAGATTTGTTTGTTTGTCTTTGTATAAATAAAGGAGTGGAGTGGACAACAGCAATCATTCATTCACAGTACACAACAGCCATTTCCCCTTTCCCTCTCTCCCTCCTCGGTCCTCCTATTCCCCATAACCAGCTAGCTTTCACCTTTAATCATCATATATTCCTTTCCTCTGTCCTTATCATCAACAACATATAATAATAATAATAATAATAATAATAATAATAATTGGATCACACACACTCTCCCTATCCCTAATCATAATACCACATGACAAAAAAGCACACTAATAAAATCCTTCAAAATTTTATTGAGAAGGCATGCTTCACTTTCATAGTTTCATTTCATTTGCTTTAATTTAATTTTTAAATAACAGTAGCATTGTTTCCACTTCCCGCCACAAACAGAG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00069.28	Pkinase	367	641	3.30E-33
PF07714.20	PK_Tyr_Ser-Thr	367	642	1.30E-31
PF13855.9	LRR_8	138	197	4.00E-10
PF08263.15	LRRNT_2	24	62	7.50E-07

Gene family

Gene family	Subfamily
Protein Kinases Family	PPC:1.9.3:RLK-Pelle_LRR-III

Gene Ontology

GO term	Description	Category
GO:0009834	plant-type secondary cell wall biogenesis	Biological Process
GO:0005524	ATP binding	Molecular Function
GO:0007178	cell surface receptor protein serine/threonine kinase signaling pathway	Biological Process
GO:0000165	MAPK cascade	Biological Process
GO:0004888	transmembrane signaling receptor activity	Molecular Function

InterPro

InterPro term	Description
IPR011009	Protein kinase-like domain superfamily
IPR000719	Protein kinase domain
IPR046959	Pollen receptor-like kinase 1-6/SFR4-like
IPR013210	Leucine-rich repeat-containing N-terminal, plant-type
IPR003591	Leucine-rich repeat, typical subtype
IPR032675	Leucine-rich repeat domain superfamily
IPR001611	Leucine-rich repeat

trEMBL

trEMBL term	Description
A0A1S2Y114	_

SwissProt

SwissProt term	Description
PXC1_ARATH	Leucine-rich repeat receptor-like protein kinase PXC1

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT2G36570	Leucine-rich repeat protein kinase family protein
Medicago sativa L.	MsG0180003427.01.T01	_
Oryza sativa L.	LOC_Os12g05120.1	receptor kinase, putative, expressed
Cucumis sativus L.	Csa004683	_
Glycyrrhiza uralensis Fisch.	Glyur002442s00040627.1	_
Codonopsis lanceolata	Cl_chr04_05780T	_
Arachis hypogaea L.	AH12G35850.1	Leucine-rich repeat receptor-like protein kinase PXC1 like

Expression pattern