| Gene ID | Annotation |
|---|---|
| Am02G018170.1 | ATPase, AAA-type, CDC48 protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am02G018170.1 | mRNA | Chr02 | 132774569 | 132778490 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF00004.32 | AAA | 245 | 374 | 8.70E-97 |
| PF00004.32 | AAA | 518 | 651 | 8.70E-97 |
| PF17862.4 | AAA_lid_3 | 397 | 439 | 1.90E-28 |
| PF17862.4 | AAA_lid_3 | 673 | 713 | 1.90E-28 |
| PF02359.21 | CDC48_N | 30 | 111 | 4.90E-23 |
| PF05496.15 | RuvB_N | 244 | 319 | 3.50E-14 |
| PF07724.17 | AAA_2 | 245 | 338 | 2.70E-12 |
| PF02933.20 | CDC48_2 | 132 | 195 | 4.70E-12 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0097352 | autophagosome maturation | Biological Process |
| GO:0005524 | ATP binding | Molecular Function |
| GO:0005829 | cytosol | Cellular Component |
| GO:0005634 | nucleus | Cellular Component |
| GO:0051301 | cell division | Biological Process |
| InterPro term | Description |
|---|---|
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR003338 | CDC48, N-terminal subdomain |
| IPR004201 | CDC48, domain 2 |
| IPR029067 | CDC48 domain 2-like superfamily |
| IPR003959 | ATPase, AAA-type, core |
| IPR003960 | ATPase, AAA-type, conserved site |
| IPR009010 | Aspartate decarboxylase-like domain superfamily |
| IPR003593 | AAA+ ATPase domain |
| IPR005938 | AAA ATPase, CDC48 family |
| IPR041569 | AAA ATPase, AAA+ lid domain |
| trEMBL term | Description |
|---|---|
| I1JPP3 | _ |
| SwissProt term | Description |
|---|---|
| CDC48_SOYBN | Cell division cycle protein 48 homolog |
| KO | Description | Enzyme |
|---|---|---|
| K13525 | transitional endoplasmic reticulum ATPase |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT5G03340 | ATPase, AAA-type, CDC48 protein |
| Medicago sativa L. | MsG0780040967.01.T01 | _ |
| Oryza sativa L. | LOC_Os03g05730.1 | cell division control protein 48 homolog E, putative, expressed |
| Cucumis sativus L. | Csa004716 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur003293s00040624.1 | _ |
| Codonopsis lanceolata | Cl_chr04_01090T | _ |
| Arachis hypogaea L. | AH06G15640.1 | Cell division cycle protein 48 homolog like |