Gene detail

Detail information of Am02G018040.1 Annotation

Gene ID	Annotation
Am02G018040.1	non-intrinsic ABC protein 12

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am02G018040.1	mRNA	Chr02	132191639	132204032	-

Sequences

CDS:

>Am02G018040.1
ATGAGGAACTATGCTTCATACCTCGTTCTTTTTTTATTGTTCTTCTCATTAACTTTGCTACCAAGGACTCAATCCGCTGATAGCACTTTTGCCCCATCCTTTTACACTGAAGAAATCTATAAGGAGCTTCAAAATCTCGCCACCCTTTTAAACAAGGACATTCAATCAAGTTTAGGCTTCTGCATAAAGGATGTGAAAAAAGATTGGGTGGAAGCTTATGATTTAACAGGAAAGTTGGATTTCGTGGATTCTTGTGTTAAGAAAAAAGGAGATTTCAGAGACCGTATATGTACTGCAGCTGAAGTAAGATACTACTTCCATGGTTTCTTGGTACAAGGAGTATCAACTGCCAATTACGTAAAACCTAACAAGAATTGCAATTTGACCTCATGGGTTTCTGGTTGTGAACCTGGCTGGGGTTGTAGTGCAGGCAAGAGTAGTGACCTCAAAAGGGACACAAAGGAAATTCCTTATAGAACCAAAAACTGTCAACCTTGTTGCGAGGGTTTTTTCTGCCCTACAGGATTAACTTGCATGATACCTTGCCCACTGGGTTCTTATTGTCCGCTTGCAAAACTGAACAACAGGACTGGAGTATGTGATCCATATAGTTACCAGATACCTCAGGGAGCAACAGATCATTCTTGTGGCAGTGCTGATATTTGGTCTGGTGTGGTGAACAATAGTGATATATTCTGTTCTCCCGGATCATATTGCCCAACTACAACACGTAAAGTTTCTTGTGATAAAGGATATTACTGCAGGATGGGTTCTACTCACCAAAATCCATGCTCCAAGTTGAGTACCTGTAATCCAAACACAGCAAACCAAAATATGCATGCTTATGGTGCTTTGCTTATTGTTGCATTGAGTACTGTCCTGATATTCATTTATAACTGTTCTGATCAAGTTCTAGCTACACGAGAAAGAAGGAAAGCTAAATCCAGAGAAGCTGCAGCAAGACAGGTAAGAGAAACTGTACAAGCTAGAGAAAGATGGAAAGTAGCAAAAGATGCTGCTAAGGGGGGTAAGATGGGAGGACTGCAAGCGCAGTTATCCCGCACCTTTTCTCGCAGAAAATCAGTAAAGGAACAATCAAAGGCTATGCCACCAATACCTCCAGATTCCTCAAGCACATCTGGACAGTCATCTGCAGCAACAAAAGGCCAAAAAAAGGAACCTAGCAACCTTACTAAAATGATGAATTCCCTTGAGAATGACCCTAATAGCAATGAAGGATTCAACCTACAAATTGGAGACAAAAATATTAAAAAGCAGATGAAGGGGGGAAAAAACTTACATACACAGAGTCAAATTTTAAGGTATGCTTATGGTCAAATTGAGAAGGAGAAAGCTCAACAAGAGAAGAACAAGAACTTGACATTCTCAGGAGTGATTTCAATGGCCACTGATGGTGATGAGGTTAGAACAAGGCCCGTGATTGAGGTAGCTTTTAAAGACTTAACCCTCACTTTGAAAGGGAAAAGAAAACATCTACTGAGGTGTGTGACCGGTAAAATCATGCCTGGACGAGTTTCAGCTGTGATGGGTCCCTCAGGAGCAGGAAAAACTACATTTCTTTCTGCTTTGGCAGGGAAAACAAGAGGATGCACTACAACGGGCTCAATTCTAATTAATGGAAGGCCTGAATCCATTCACTGTTATCAGAAAATTATCGGTTTTGTGCCACAAGATGATATTGTGCACGGGAACTTGACAGTGGAGGAAAATCTCCGTTTTAGTGCAAGATGCAGACTGTCTGCTGACATGCCAAAACCAGATAAGGTTCTGATTGTTGAAAGAGTAATTGAGTCCTTGGGACTCCAGGCAGTGAGGGATTCCCTTGTCGGGACAATAGAGAAGCGAGGCATATCTGGAGGACAACGAAAACGTGTAAATGTAGGGATGGAAATGGTTATGGAGCCTTCATTGTTAATCTTAGATGAGCCTACAACTGGTTTAGATAGTGCATCTTCTAGTTTACTTCTTAGAGCACTTCGTCGTGAGGCTCTTGAAGGGGTTAACATCTGCATGGTACTTCATCAACCAAGCTATACATTGTTCAGAATGTTTGATGATATAATATTTCTAGCCAAAGGTGGTCTTACTGCATATCACGGTCCTGTTAAAAAAGTAGAAGAATACTTCGCTAGCATTGGAATCACTGTACCTGATCGTGTGAATCCTCCAGATCATTTCATTGACATTCTGGAAGGTTTGGTGAAACCAAGTTCAGGTGTTACCTATGAACAACTTCCTGTTAGATGGATGCTTCATAATGGTTACCCAGTACCACCAGATATGCTTCATTTTGCTGATGAAATTTCTGCTTCATCATCTTCCTATAAAACAAATGAGGCAATAAAAGGCACTGATACTTCCGATCAATCATTTGCTGGAGAGTTTTGGGAGGATATGAATAGTAATGTTCAGATGTACAAAGATCATATAGAGGCAACCTTCTTAAAGACTAAGGACTTATCTGACCGAAGAACTCCTGGTATATCTCGACAGTATAGATACTACCTTGGGAGGATTGGTAAGCAGCAACTGCGGGAAGCGAAATCACAGTCAGTTGACTATCTCCTTTTATTAGTTGCTGGTGCTATCTTGGGAACTCTTACGAAAGTAAATGATGAAACATTTGGGTCTCTTGGTTATACATATACTGTCATTGCTGTTTCTTTACTTTGCAAGATTGCAGCTCTTCGATCATTTTCTCTGGATAAATTACAATACTGGAGAGAGAGTGCGTCTGGGATCAGCAGTCTGGCTCATTTTTTGTCCAAAGATACGATTGATCTTTTCAATACAATTGTCAAACCTCTCGTTTATCTGTCCATGTTCTATTTTTTTAGCAATCCGAGGTCAACCTTCGGAAGTAATTATATGGTTTTGCTCTGCCTCGTGTACTGTGTGACTGGCATGGCGTATGCATTAGCAATTTATTTTGAGCCTGCTCCAGCTCAACTGTGGTCAGTGCTTCTCCCTGTTGTTATGACTCTCATTGCAAACCAGAAAAGAGATACTAGCCTTATGAAGATCCTAGTAAAATTGTGCTACCCAAATTGGGCTTTGGAGGCCTTTATTATTGCAAATGCTGAAAGGTACACTGGGGTGTGGCTAATAACTCGCTGTAGTTCACTGATGAATAGCGGTTATAATGTCAGCGATTGGCCAATTTGTCTCATTGTCCTCATTTTTTATGGTATAGTTGCCCGAGTTGTGGCCTTTTGTTGTCTGGTTATCACCCAGAAGAAGTGA

Protein:

>Am02G018040.1
MRNYASYLVLFLLFFSLTLLPRTQSADSTFAPSFYTEEIYKELQNLATLLNKDIQSSLGFCIKDVKKDWVEAYDLTGKLDFVDSCVKKKGDFRDRICTAAEVRYYFHGFLVQGVSTANYVKPNKNCNLTSWVSGCEPGWGCSAGKSSDLKRDTKEIPYRTKNCQPCCEGFFCPTGLTCMIPCPLGSYCPLAKLNNRTGVCDPYSYQIPQGATDHSCGSADIWSGVVNNSDIFCSPGSYCPTTTRKVSCDKGYYCRMGSTHQNPCSKLSTCNPNTANQNMHAYGALLIVALSTVLIFIYNCSDQVLATRERRKAKSREAAARQVRETVQARERWKVAKDAAKGGKMGGLQAQLSRTFSRRKSVKEQSKAMPPIPPDSSSTSGQSSAATKGQKKEPSNLTKMMNSLENDPNSNEGFNLQIGDKNIKKQMKGGKNLHTQSQILRYAYGQIEKEKAQQEKNKNLTFSGVISMATDGDEVRTRPVIEVAFKDLTLTLKGKRKHLLRCVTGKIMPGRVSAVMGPSGAGKTTFLSALAGKTRGCTTTGSILINGRPESIHCYQKIIGFVPQDDIVHGNLTVEENLRFSARCRLSADMPKPDKVLIVERVIESLGLQAVRDSLVGTIEKRGISGGQRKRVNVGMEMVMEPSLLILDEPTTGLDSASSSLLLRALRREALEGVNICMVLHQPSYTLFRMFDDIIFLAKGGLTAYHGPVKKVEEYFASIGITVPDRVNPPDHFIDILEGLVKPSSGVTYEQLPVRWMLHNGYPVPPDMLHFADEISASSSSYKTNEAIKGTDTSDQSFAGEFWEDMNSNVQMYKDHIEATFLKTKDLSDRRTPGISRQYRYYLGRIGKQQLREAKSQSVDYLLLLVAGAILGTLTKVNDETFGSLGYTYTVIAVSLLCKIAALRSFSLDKLQYWRESASGISSLAHFLSKDTIDLFNTIVKPLVYLSMFYFFSNPRSTFGSNYMVLLCLVYCVTGMAYALAIYFEPAPAQLWSVLLPVVMTLIANQKRDTSLMKILVKLCYPNWALEAFIIANAERYTGVWLITRCSSLMNSGYNVSDWPICLIVLIFYGIVARVVAFCCLVITQKK*

Promoter(3k):

>AM02G018040.1
TTTCACTTTTCTTTTACACTCTCTTTCTTCTTTTTTTCTTTTTACTTTATTTTTCCCATAAATAATTTATACTAATACTACTTTAATTAAAATTTTTGAAGACTACTACTATAAACCTACTATCTAAAAAACAAGAAGACTTAATGACTATTTAAATTAGTAATTAACATTTTAAAACAAATATTTCTTATTGATAATCTAATATTTAACTTTTATTATCTATTATAATCTACTAATCAACTAAAATAATCAACTGAAACTACGAGATAACTGCACTGATAAATAAAAAAACGGGATAACTGCAGTGATATATAAAAAAACACGGGATTAATATTTACCATCGATATTTATAATTTTTTTGACAATCTATAATTAAAAAAATACGGGATTAATATTTACCATTGATATTTATAATTCTTTTTTACAATTTATAATTATAATTTTGGAAAACTACTATAAACCTACTATCTAAAAAAACGTGGGATAACTGCAATAATCTACTATAATCTACTAATCAACTCAAATAATCTAATATAAAAACACGGGATTACTGTAATAATCTAGTATAATCTACTAATCAACTCAAATAATCAATTGAAACTATGAGATAACTGCAATGATATATAAAAAAACACGAGATTAATATTTGTCATTGATAATTAAAATTTTTGAAGCCTACTGCTACTGCTACAAACCTACTATCTAAAAGATAAGCAAACTTAATGACTATTTAAATACTAATTAATATTCAAAACAATTATTTTTTATTGATAATCTACTATCTAACAAATTTACTATCTACTATAATCTACTATCAACTAAAATAATCAACTGAAACTACCAGATAACTGCACTGATATATAAAAACACGGGGATAACTGCAGTGATATATAAAAAAACACGAGATTAATATTTGTCATTGATAATTATAATTTTTGAAAACTACTATCTAAAAAAACAAGAAGACTTAATGACTATTTAAACTGATTAGTATTTAAAACACACGCGACAAATATTTGTCACTAATACCTAAAAAAGGACAAATAATTGTTACTCATATATAAAAAAACACGGGATAAATATTTTTTATTGATAATCTACTATCTATCTTTTACTATCTACAATAATCTGCTAATCAACTCAAATAATCAATTGAAACTATGAGATGACTGCACTGATACATAAAAAAAACACTGGACAACTGCACTGATATATACAAAAATACAAGGATAACTGCAATGATATATATAAAAACACGGGATAGTTGCACTGATATATAAAAAAAATGGGATAACAACACTGATATATAAAAAAACATTGCACTGATATATAAAAACACACGGGATAAATGCACATATTGTTTTTAAATGATACTTTTACATTTTTAGTTTTAATATTTATCAACTTTTTATTTGAAACTCATTTTTTATTCACTTTAAATTTTTATTTATTTTCACGGGGTAATGTTTGAGACAATTTAAATACTGTCTAAAATCATTCATAAAAAAACACGACAGCACCTGTCCGTATGCAAGTCATCCTCAATATTTTACAATTGATTTTAGATTAATGAAATTTCAAATTAATGTTTCTATTTGAGGTAATCGTATCACATAACACCCGCACGGGTATAGTACTAGTTGTAAAATTAAAATTAGGCTAAATAGCACTTTTAGTCCTTTATCTTTGCTCCAGATTTCACTTTGGTCCTTTATCTTTTTTTTTGTCCGTTTTGGTCATTTATCTTTCATTTTCGTTTCACTTTGGTCCTTAATCTTTTTTTTGTCCGTTTTGGTCCTTTATGTTTCATTTTTGTCCCTCACGTTATTATTTAATTCAATTAAAACATTAAAACAATTAAAACAATTAAAACAAAATTATTTTAAAACAATTAAAACAATATTTTGGTCCCCCACCGTGAACCCCTCCCCCCCACCGTGAACCCCTCCCCCTCACCGTGAGCCACCAACAACCACCACCCATAGTTAGAATCTGTCGCTGGGTGAGAGAGAGAGAAACGAAACTGAATTTATGTAACAGATCTGAAAACGATTTGTTCATGAAGGAAGAAGAAAGCTCAAGGTTCGAAAATGGCAAAATATGAGAGAGTGAATTGTTGGAGATGATGTTGGTATCGAATTGAAGAGGATAAAATGGTGATCAACTTTCATGTTGGATGGATGATGATTTGATGAGCCTTGGATGCTCCTTTTCCCTCTTCTTCACCCAAACCCATTTTTTCTTCTTTTCTTTCTTCCCTCACGGGTCTCTCTCTCTCTGTTTCTCCCATTTCCTTTCTTTCTTAATTCCTTTAATTATTTAATTGTTTTATGTTTTATGGTGGGTGGTGGTGGGAGGTGGTGGTGGTGGGTGGTGGTTGACGGTGGTGGATGGTGGGGGGGGGGTTTATGTTTTATTTATTTAATTGTTTTAATTTAATTAATTGTTTTAATTGTTTTAATGTTTTAATTGAACTAAATAATAACGTGAGGGACCAAAATGAAACGAAAATGAAAGATAAAGGACCAAAACGGACCCAAAAAAAGATAAAGGACCAAAGTGAAACAAAAATGAAAGATAAAGGACCAAAAAAAAGATAAAGGACCAAAGTGAAATTTGAAGCAAAGATAAAGGACCAAAATTACTATTTAGCCTTAAAATTATAAGCAATGCACATCAGTCGTGTCGTCCTCTTAAAAACGCAGGCCAAGTGTCCCATTGATATTGATACAATATACAATCACTTGCTTAGCTCAGAGGCTGAGGAGAGAGGGAGAGGAAACAATGCACATCCTTGAATCTAGGCATCCATTTCTCTCGGCCATTTCTTCATCCCAAAAACAAGCCACACCTCTTTCCACATTCCCCACCAATGAAGAAGAAACCTTTCACACCCTCATTCTCTTTCTTCCACTTTCGCTTTCTGCATCCCAAACCCATGGCATGTTCTTCTCCAAACGATGCTTGATTCGGTGTTCACCTCCAAATTATACATGAAAA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF19055.3	ABC2_membrane_7	681	1087	3.40E-216
PF00005.30	ABC_tran	503	651	2.20E-23

Gene family

Gene family	Subfamily
Transporter family	ABC

Gene Ontology

GO term	Description	Category
GO:0055085	transmembrane transport	Biological Process
GO:0016020	membrane	Cellular Component
GO:0009507	chloroplast	Cellular Component
GO:0016887	ATP hydrolysis activity	Molecular Function
GO:0005524	ATP binding	Molecular Function

InterPro

InterPro term	Description
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR017871	ABC transporter-like, conserved site
IPR003439	ABC transporter-like, ATP-binding domain
IPR043926	ABC transporter family G domain
IPR003593	AAA+ ATPase domain

trEMBL

trEMBL term	Description
A0A1S2Y2P0	_

SwissProt

SwissProt term	Description
WBC30_ARATH	Putative white-brown complex homolog protein 30

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT2G37010	non-intrinsic ABC protein 12
Medicago sativa L.	MsG0780040950.01.T01	_
Oryza sativa L.	LOC_Os11g22350.1	white-brown complex homolog protein, putative, expressed
Cucumis sativus L.	Csa011890	_
Glycyrrhiza uralensis Fisch.	Glyur000658s00024849.1	_
Codonopsis lanceolata	Cl_chr04_00380T	_
Arachis hypogaea L.	AH12G36600.1	Putative white-brown complex homolog protein 30 like

Expression pattern