Gene detail

Detail information of Am02G017980.1 Annotation

Gene ID	Annotation
Am02G017980.1	NRAMP metal ion transporter family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am02G017980.1	mRNA	Chr02	131911107	131919200	+

Sequences

CDS:

>Am02G017980.1
ATGGAAGCTGAGAATCTGTACAATAATCAGGCTCACAGTTTTCTTCACCAGTCACTTCCTGCTGTTTTACCTATACTTATGATTGCCATAGGATATGTTGACCCTGGGAAGTGGATGGCAATTGTTGATGGTGGTGCACGGTTTGGGTTTGATCTGATGGCCTTCACACTTATTTTCAACTTTGCAGCCATTTTCTGTCAGTACACATCAGCAAGAATTGGTGTAATCACAGGAAAAGATCTTGCTCAGATTTGCAGTGATGAATACGATAATTGGACTTGCATGCTCCTTGGAGTTCAAACAGAACTTTCAGTGATTATGCTAGACCTTAACATGATATTGGGCATGGCATACGGATTAAATATTCTTTTTGGGTGGGACTTGTTCACTTGTGTCTTTTTAACTGCCACTGGTGCTGTTTTCCATCTACTCCTTGTTGTCCTCCTCGACATTGAGAAGGTGAAGATCCTAGGCATGTTTGTGGCAGGTTTTGTATTACTTTCTTTTGTTCTTGGAATACTCATTAATCAACCAGAAATTCCATTGCCCATTAATGGAATACAAACAAAGTTGGGTGGAGAGAGCGCATTTGTACTAATGAGTCTTCTAGGAGCGACTCTTTCCCCTCACAACTTTTACCTTCATTCCTCTATTGTTCAGTGGCATCAGGGATCAGCAACCATTTCTAAGGAAGCTTTGTGTCATAACCATTTATTGGCCATCATATGTGTCTTCAGTGGCCTTTATTTGGTGAATAATGTGCTGATGAATGCTGCAGCAAACGAGTTCTACAGTATGGGTATTGTTTTGACTACTTTTCAGGATGCATTATCACCAATGGAACAGGTTTTGCGTAGTCCAATAGCCTTGCTTGCATCTATACTTTGTCTGTTCCTTTCAAATCAAACCACAGCATTAACTTGGAGTTTTGGTGGAGAAGTAGTTGTGCAAGGTTTCTTAAAATTGGATATTCCGGTTTGGCTTCACTATGCTACAATTAGAGTAGTTGCTGTTCTGCCTGCTCTTTATTGTGTTTGGAGTTCAGGAGCTGAAGGGATGTATCAACTACTTATATTCACCCAGGTTTTGGTAGCTCTGCAACTTCCATCTTCTGTGATCCCCCTTTTTCGAATTGCTTCATCTAGATCAATAATGGGTGTACACAAGATCCCTCAATTTGTGGAGTTTTTAGCTTTGATCATATTTATTGGGATGCTTGGCTTGAATATTATCTTTGTGGTAGAAATGCTATTTGGCAGTAGTGATTGGGTGGGAAATTTGAGATGGAATGTGGGGAATGGAGTGTCTCTTTCTTATTTAGTTCTTCTTTTCGCTTCTTTTGCATCATTCTGTTCGATGCTTTGGTTAGCTGCTACACCTTTAAAATCCGCAACTGTCCAATCAGATTCCCAGGCATGTAACTGGGGCATGCCAGAGGCCCTACCAACTCCACGGATTGATAATGAGGAATCAAGTTTGACTGAAACAAGGTATCATGGAGATGAATCTGTTCAGGTTGACGAACCATCACCAGCTTTAGCAAGTATGGAATGCTCAGATGTACTAGTTGCAAGTTTTCATCCTGATCTACCTGAAACTATCTTGGAGCCTGATCTTCATGTTACTACTACTGTAAGGGAGGCTCAGTCAATTACATCATTTACTTGTTCCCTGACATCTGTTGTTAAAGAATCAGCTTCCACTTCAGAATCAGAGGTAGTACCCGCTGTAATTAATGAGACTTCTGATATTAAATTGGGAAATACCAAAACTTTGAAAATAGAAACAACTGCTCCAGTTGAGAAAACCGTAGAAGTTGAGGGAGATTCAAATGCTGAAAGGGACGACGATGAGGGGGACTCCTGGGAAATTGAAGAAACATCCAAAATGGTTTCATCAACTGCCCCATCTTCTGCTTCAGATGGCCCCGCATCATTCAGGAGCCTTAGTGGGAAAAGTGAGGATGGGGGGAGTAGCATTGGAAGCCTTTCAAGATTAGCAGGCTTAGGGCGTGGTGCAAGGCGTCAGCTTGCTGTTATTCTTGATGAATTCTGGGGACAACTTTATGATTTCCACGGGCAAATTACCCAAGAAGCTAAGGCTAAGAGATTAGATGTTTTACTTGGAGTAGAATCAAGACTTACTAGTTCGTTGCAGAAAGTGGATGCAAGTTCCAACAATGCATCTGGAAAGGAATATTCTGATTACTTAATATCTGCTGGAAGTAGAGCTCCGGATACTTCAATGAACTCTGCTCCATATGACTCTCCCAAGCAGAATAGGATGCAAAGCAATTTAGAGTCTTCATATGGGCTTCAAAGGAATTATTCCTCATTGCGATCAAATTCTATGAGATCGATAGATGAATATGTACAAACTTCCAGCCGCAATCTCCTTGATGCTGGTGAAAGGCGCTATTCCAGTGTACGCAATCTGCCTTCATCCGGAGGTTGGGATTATCAGCCAGCTACTATATCTGGTTATCAGACTGCATCATATATTAACCAGGTTGGTAAGGACAGAAATTCTGACAACTTAAATGGTCCCATGGAAGTATCTCCACTGAAATCTCCTCCCATGGGTAATACAAACTACAGGAATTCCTTTGCATTTGCTTTGGGGCAACAAAAGTTGCAGAGTGGTTTAGGCCTAGGCCAACCCCTAGGGTTTCAAAACATTGCTGTCTCCAGGAATTGCCAACTGCCATCAGAGATGTTCTATTATGATTCTCGATCTCCTGTTCCTACAAATAATGCAGTCAGTTCAGTTAATACTAAGAAGTACCATAGCTTGCCAGACATTTCAGGATATGCTGTCCCTCACAGGGATGCTTACATGTCTGATAAGAGTCCTCCATGGGAAGGTTCTGTTGGTGGATATGGATCTTCTGCAAGTAAGATTCATTATGAACCATCATTATATTCAAATTCTGGATCAAGGAGAGGAGCTCCTTTAGCTTTTGATGTACTCTCTCCATCAAACGTCTACGGAGATGTACTTTCTTCTCAGATGAGTTCAAGCTTTGGTACTGGATCCCTCTGGTCCAGACAGCCTTTTGAGCAATTTGGTGTGGATGATAAAGTTCATAATGCTGCAAAAGATGTTAGAAGTAGGCCTAGCGCCAGTGCCCAAGAAACTACTTCAGTTGTGGATATAGAAGGCAAACTTCTTCAAACTTTTAGACATTGCATTGTGAAGCTCTTAAAGTTGGAAGGGTCTGATTGGTTGTTTAGACAGAATGATGGGGCTGATGAGGATTTGATTGATCGCGTAGCGGCAAGGGAGAAATTCATTTATGAAGTTGAAACGACAGAGATGAACAGGTTCAATAATATGGGAGAAGCTCAATATTTCTCTTCTGATGGGAAGTCTGGTTCTGCAATGAAGTTTAATGAAGTAAATTGCTCTAGTTTCTCTGTGTCGTCTATCCCTCACTGTGGGGAGGGATGTGTATGGAGAGCAGACTTAATAGCAAGCTTCGGGATTTGGTGTATCCACCGTGTTCTTGACCTCTCACTTATGGAGAGCCGGCCAGAGCTTTGGGGAAAATACACATATGTGCTCAATCGCCTCCAGGGTGTCATTGACCTGGCTTTTTCCAAGCCTCGTAGTCCCTTGGCCCCATGCTTTTGCCTCCAGGTTCCGTCTTCGCACCAGCAGAAGTCAAGCCCGCCTTCTTCCAATGGGATGCTGCCCCCTGCTGCAAAACCAGGTAAGGGGAAATGCACAACTGCGTCAACGGTTCTCGAAATGGTCAAAGATGTAGAGATTGCAATTTCTAGCCGGAAAGGTCGTACAGGAACTGCAGCTGGTGATGTTGCTTTCCCAAAGGGAAAGGAAAATTTGGCATCTGTCCTCAAACGGTACAAACGTAGATTATCCAATAAAACAGTTGGCACTCATGAAGGGACTCGCAAGGTTCCCACATCAGCACCATACAATTTGTAG

Protein:

>Am02G017980.1
MEAENLYNNQAHSFLHQSLPAVLPILMIAIGYVDPGKWMAIVDGGARFGFDLMAFTLIFNFAAIFCQYTSARIGVITGKDLAQICSDEYDNWTCMLLGVQTELSVIMLDLNMILGMAYGLNILFGWDLFTCVFLTATGAVFHLLLVVLLDIEKVKILGMFVAGFVLLSFVLGILINQPEIPLPINGIQTKLGGESAFVLMSLLGATLSPHNFYLHSSIVQWHQGSATISKEALCHNHLLAIICVFSGLYLVNNVLMNAAANEFYSMGIVLTTFQDALSPMEQVLRSPIALLASILCLFLSNQTTALTWSFGGEVVVQGFLKLDIPVWLHYATIRVVAVLPALYCVWSSGAEGMYQLLIFTQVLVALQLPSSVIPLFRIASSRSIMGVHKIPQFVEFLALIIFIGMLGLNIIFVVEMLFGSSDWVGNLRWNVGNGVSLSYLVLLFASFASFCSMLWLAATPLKSATVQSDSQACNWGMPEALPTPRIDNEESSLTETRYHGDESVQVDEPSPALASMECSDVLVASFHPDLPETILEPDLHVTTTVREAQSITSFTCSLTSVVKESASTSESEVVPAVINETSDIKLGNTKTLKIETTAPVEKTVEVEGDSNAERDDDEGDSWEIEETSKMVSSTAPSSASDGPASFRSLSGKSEDGGSSIGSLSRLAGLGRGARRQLAVILDEFWGQLYDFHGQITQEAKAKRLDVLLGVESRLTSSLQKVDASSNNASGKEYSDYLISAGSRAPDTSMNSAPYDSPKQNRMQSNLESSYGLQRNYSSLRSNSMRSIDEYVQTSSRNLLDAGERRYSSVRNLPSSGGWDYQPATISGYQTASYINQVGKDRNSDNLNGPMEVSPLKSPPMGNTNYRNSFAFALGQQKLQSGLGLGQPLGFQNIAVSRNCQLPSEMFYYDSRSPVPTNNAVSSVNTKKYHSLPDISGYAVPHRDAYMSDKSPPWEGSVGGYGSSASKIHYEPSLYSNSGSRRGAPLAFDVLSPSNVYGDVLSSQMSSSFGTGSLWSRQPFEQFGVDDKVHNAAKDVRSRPSASAQETTSVVDIEGKLLQTFRHCIVKLLKLEGSDWLFRQNDGADEDLIDRVAAREKFIYEVETTEMNRFNNMGEAQYFSSDGKSGSAMKFNEVNCSSFSVSSIPHCGEGCVWRADLIASFGIWCIHRVLDLSLMESRPELWGKYTYVLNRLQGVIDLAFSKPRSPLAPCFCLQVPSSHQQKSSPPSSNGMLPPAAKPGKGKCTTASTVLEMVKDVEIAISSRKGRTGTAAGDVAFPKGKENLASVLKRYKRRLSNKTVGTHEGTRKVPTSAPYNL*

Promoter(3k):

>AM02G017980.1
GCGAGGCGGGTTGGCCCGCCAAAGGATAGTAGGTTGAGAAGTTGAGCCTGCCCCGCCCCTCGGTGGGTTGGCGGGTGACAGGCTAGTCCGTCATTAAAATAAATAAATAATATATTTAAAACATATTTTTTGAGCTTAAAATTGGCGGGTTTGCTAGCCTAAGACCACCAAAAACAATGGTTCGGTTAAAAAAGTGTTTATTGACAATTTTAGTAGAATGGAGACACCGACTCCCAAGTTCGAACTCGAGTGTGTTTGTTGAATAGTATGTATGGTATTTATTTGTCATTTCATTTAATTTTAAAATATAATATAAATAACTAAAAACACAAGATATTCATTTTTCAATGTTTTTTTCTTTACAAATCCAATTAAATCATTAACTTAGTTGTAGAAACATGAAAAACAATGAACTTATATTCACATTTAATTGAAGTGGGTAGTTAGTGTCACCCTATATTTTCAAACATCAGTCCATTAAAAACCAGATAATGTAACGTTCCACCCTATCGATGAGATCGATTGTCCAACCAATAATTTGTCCGTTGAAGGAGAGACGGTCACATTTCTAATTGTGGATAATGTCTTGAATTGTCAACAAATATGCAACAGAATCAAGATGACTAAGTGTGCCAAAAAAGAAAAAGAAGCAAGATGACTAATAAATAGAAATGGAAAATGGTGCGAGAGAATGAAAGATCGACCCACATAGGATGATGGAGGGAAGAAAATAAGCTACAAAAGTCAATGAAGTTAAGACTATGTTAGAAGCCGGGTACCCCTATGTTTCGTAGAACGCCCGCCCAAACTTATAGTGGATAAGCTGTGTTTATAAGTGTTTAATAGAACTAGCTTTTTTGTATGAGTTTATAGTTTATAGTTTATAACATTTCATTTTATTCTCACTTTACCGGTGTTATTTTCATTAAACTTCTCATTTATCCTCCATTAGAGGAATATCTCTCATTTTTAAGCATTAATTATAAAATATCAATTTATGTCATTTTATATTTATGAACAAATTCAACCATTAATTTTACCAGACACTTTAAATTCAATGGAAAATTACCCTCAGCCTCTCAGTACACACACCCTTTATTTTACAAAATACATCGACTTCCCCTAGATTGCACACACCTCCCATCTTTTAAGTAAAAATAGAGGATGAAAATGTTTGTGTTTTTTCAACAAATAGAGGATGCAGATTACACACACATCGACCACACGGAGGTGTTTGTATTTTTAAATGAAACTTAAGGAACGTGAGTCAACTTTTTTGCTAAAAGAGTTGTGTTCATTTAAAAATTAGAGAAGATATGTATGTCATTTAATTCAACCTTAAGAGTGGTGACTATAATTTTCCCTAAATTTAATCGGCTATCGACTAGCTTATCCATTATTCGCTATTATTAAAGAGATCATAAGAAAAAAAAATACTTACTACAAGTTAGAAAAAACGTTTGTTTTGTTTTTTTAGGGCTTTGTTGGCTTTTGGAACACATCTACGAGCGAAATTTTTCCTCACTTCACTTCCAAACACTTTCTCTCTCTTCAATGTGGCCTAGAAAGTTGAAACAGCTTGAAAGTTGAAACCCATTCCATAATTTTATTTTCTTTTTTAACTTTCTTTCCGCTTTCCCGGAAAATCGACTTCTCTTCTCTCTCTCCAAATATACCTAAGTTAAAGTTAGTATAATTAATTATTATATCAATAAATAATTATTACATGATAAAATTATTGATTATTGTTGATGTTTATATATATGATCCTGAGAATTATTCTGAGAGTCTGAGATCTACTTTGCAGGAGTGAATAGCACACAGCACAGCATAGCAGAGAGAGAATAGAGATAGGGATTCGTGGCAGATGAAAAGAAAATCAGAGAAAGGTAAAGATGTCTGAACCCTAACGACTCTGAAAACTGTACGGTCTCTTTTATTGTGTGATGATGATGATGAAATTCCCAAACCAATCGTCATCTTTGCTGAAATTAATGCAACTCTTTTTCTCTTCATTGCTCCTTTTTCCCTTTCTTTCTTCTTAAAAAAAACTGCATCGGATCCACACCGTCAATTTCGCTTCTTCTTGATTCTTCTATCTGTTACTTCACCTTTCACAGTGTAGTGTTTTTCAACTGAATTATATCTTACGCTCCAAAAAGATCTAAAAATTTTCTTCACTTTCGGTTTTTTTCTCAAAAAACTCTGCTGAATGCTGGAATTACGTTGGTGTGGTTCTCAGGATTGGCAAGGTTGTTTTCATTTAGTTGAATAGTTTTCTTGTTTCGAAGAAAGATAAATTCTTGCATCCTTTTTGTGATTGAAGTTTCTCTTTGAGTTTCTTGTAATCAATCATGGTAATGATGACGAATTATTCATGGCTGGCAGTGTTGTTATTTGCAGTCTCTACTCTCTAGTTCCTATTATGATACTTATGTTGTTACAGTAACTGATTCGCTTGCAGATTCAAGAAATCCGAAGAGGAAGTGGTTGAATTTTTCAGGGGATACTTTATTGGATTAGAATTGAGAGTCAGTCATCAAGGGTATTTGAAGATTTGGGATGAAATGGATTGACTTTCAATCATGTTGAGGAGATGAATAAAACTATTGGGTTGTAGTGGTATAAAGGTTGACTTTATGGAGAATATCAGATTTGTATCTGATGATCACAGTTAATGTTCGAACATTGTAGGCTGTTCTCTGGTGAACACTGAGGAGCTAGTTATTGAATTGCCACGGGTATCTTCATCTGACTTGCAAGTTGCAAGTCCTTGTCTTTCAACTTTCCTGCTTATAGTAGTTAATATTTCAAGCTGCTAACATCTTGGCGGGTAAATTGTAAATTGTTAACGGATGGAGTATTTTGCTAGTAATTTACTCAAGTAGCAGCAATATATTTTGTGGCTTGAGAGTTTTTGTCCATTAGCTACTTCTAAGTGTTTGTTTGAAAAGCAGCATAATTTGCCTGTAGCATAAGTCTTGGTGGCTCAAGAGTAAA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF01566.21	Nramp	38	390	1.30E-75

Gene family

Gene family	Subfamily
Transporter family	Nramp

Gene Ontology

GO term	Description	Category
GO:0005384	manganese ion transmembrane transporter activity	Molecular Function
GO:0071944	cell periphery	Cellular Component
GO:0070574	cadmium ion transmembrane transport	Biological Process
GO:0071421	manganese ion transmembrane transport	Biological Process
GO:0034755	iron ion transmembrane transport	Biological Process

InterPro

InterPro term	Description
IPR001046	NRAMP family
IPR017187	Ethylene-insensitive protein 2

trEMBL

trEMBL term	Description
A0AAN9QRV2	_

SwissProt

SwissProt term	Description
EIN21_POPTR	Ethylene-insensitive protein 2.1

KEGG

KO	Description	Enzyme
K14513	ethylene-insensitive protein 2

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G03280	NRAMP metal ion transporter family protein
Medicago sativa L.	MsG0780040939.01.T02	_
Oryza sativa L.	LOC_Os07g06130.1	ethylene-insensitive protein, putative, expressed
Cucumis sativus L.	Csa011938	_
Glycyrrhiza uralensis Fisch.	Glyur000327s00026463.2	_
Codonopsis lanceolata	Cl_chr05_27930T	_
Arachis hypogaea L.	AH08G24940.1	Ethylene-insensitive protein 2 like

Expression pattern