Detail information of Am02G016940.1 Annotation
Gene IDAnnotation
Am02G016940.1 ARM repeat superfamily protein
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am02G016940.1mRNAChr02128149833128153702-

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF00514.26Arm5045434.10E-38
PF00514.26Arm5906254.10E-38
PF04564.18U-box2413123.30E-24
Gene family
Gene familySubfamily
Ubiquitin FamilyU-box

Gene Ontology
GO termDescriptionCategory
GO:0004842ubiquitin-protein transferase activityMolecular Function
GO:0016567protein ubiquitinationBiological Process
GO:0005634nucleusCellular Component
GO:0005737cytoplasmCellular Component
GO:0016020membraneCellular Component

InterPro
InterPro termDescription
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR003613U-box domain
IPR045210PUB protein, U-box domain, plant
IPR016024Armadillo-type fold
IPR011989Armadillo-like helical
IPR000225Armadillo

trEMBL
trEMBL termDescription
A0A1S2XVF7 _

SwissProt
SwissProt termDescription
PUB2_ARATHU-box domain-containing protein 2

KEGG
KODescriptionEnzyme
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Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT5G67340 ARM repeat superfamily protein
Medicago sativa L.MsG0780040750.01.T01 _
Oryza sativa L.LOC_Os08g01900.1armadillo/beta-catenin repeat family protein, putative, expressed
Cucumis sativus L.Csa019316 _
Glycyrrhiza uralensis Fisch.Glyur000248s00011318.1 _
Codonopsis lanceolataCl_chr06_36410T _
Arachis hypogaea L.AH02G08930.1U-box domain-containing protein 3 like

Expression pattern