Gene detail

Detail information of Am02G014640.1 Annotation

Gene ID	Annotation
Am02G014640.1	AT-hook motif nuclear-localized protein 20

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am02G014640.1	mRNA	Chr02	120684134	120689309	+

Sequences

CDS:

>Am02G014640.1
ATGGTTGTTGGGGCTCAAGGAGCTAACCCTACCCGCTGGAGGCCTGTGCCGCTTGGGGTGCAAGTTACTGCTAGGGCAGTGACATATTTGGCTATCAGAGTCGTTACTTGTTCAATAATTCTGGCTAATCCTTGGTGGACAATTCAAGGAGGGTTAACTGGGGTTGACCCTCACCCAGGAACTCATTCACCAAACAATCTAAACAAACGCCACTTTACAGACCTAGGAATCAACGAAACCAGAGCTGATGATGAAGAAGAAGAAGAAGAAGAAGATAACAGATCAGATGAACCAAGAGAAGGTGCAGTTGAAGTAGGAAACAGAAGACCAAGAGGAAGACCACCGGGATCAAAAAACAAACCAAAACCACCGATCTTTGTAACAAGGGATAGTCCAAACGCACTTAAAAGCCATGTGATGGAAGTAACTGGAGGAGCAGATATAGCAGAAAGTGTAGCACAATTTGCAAGGAAACGTCAACGTGGTGTTTGTGTTTTAAGTGGAAGTGGTTCAGTTGCAAATGTTACACTTAGACAACCATCAGCTCCTGGTGCTGTTGTAGCATTACATGGCAGGTTTGATATTCTTTCTTTAACTGGAACATTTTTACCTGGTCCTGCTCCTCCAGGTTCTACTGGTCTTACAGTGTATCTTGCTGGTGGACAAGGTCAAGTTGTTGGAGGATGTGTTGTTGGATCTCTTGTTGCAGCTGGACCTGTTATGCTTATTGCTGCTACTTTTACTAACGCTACTTATGAGAGACTTCCACTTGATGATGACGATGCTGGTGATCATATTGAAGGGCCTAATTCTGCGGCCGCACAAGGAGGGGGCGGTGGTGGATCGTCGCCCCCACCGGTTATCGGTGGGGGTCAGTTTCCAGATCCATCATCTTTGCCTTTGTATAATTTGCCCCCAAATTTGTTGCCTAATGGAGGGCATAATATTGGACATGAAGCTGATCTTGCTTGGGCTCATGGACGCCAACCCTACTGA

Protein:

Promoter(3k):

>AM02G014640.1
CTTAAATATAACATACACAACACAACATATATCACGTGTATTAGAATAATACACATTAGTATGGATATTTTAGATTTGACCAAATATATATATAAATGATAATATATTTTTAGTAACATTTTATTTTACTAAAAAATTTATTTTTTTACAAAAAATGCAAATAACAAACAATAATTATAATTTATTTTATTTTATTTTCGAATAATTTCTGTAACACCAATAATTTCCATGAATAAAATTTATCTTATTTTCATGAAAAATTTCGGCTAATAACATCAAATAACATTAAAATAATTTGTTTTTAATTTTACCAAAATAACTAATAATTTTTCGGTTTTTAACTAATAAATAAAATAATTCGTATTTTAAAAATCTCAAAATTTTGAGATAATTATTATTATACAAATAGTGTAAACATAATTTAATTATTACAGAATAAATAAAATTTATTTTATTTTTGTAAAAAACTTATAATTTATAATAACACCAACAAATACATTTAATAACGAATAAATTTGTTAACTAACCGGTAATGCAGTGACTAAACTCCAAACTAACAACTCCAAAGTGGCAACTTCAATCAACTGCAAAACAAATAATAACAAAAAATATTAAACAACACATATTTAAAAATTAAATATTAACTAAAACAATCCAAATTTAGTTAAAAAACATACCTTAAACAAAACTGACTTCGAAAAGAGTGAATCGAGAGAAAATGAGAAGAAAATAGTGAGAGATTTGAGAGAAAAGAGTGAGATTTAGGAGAAAAGAGAGAGATTTCGGAGTAAAGAGTGAAGAGGAAGTGAGGAGGGGTGGGAATATATAAGGGAATAGGCGCCAACGGCTATATTCGAAAATCCGCCGGAAAATTTGCTTACCGGCGGATATTATGTTTACCGGCGGATACCAACGGATATTTCCCAACGGCCAGAATGCACCGGCGGATAAACTAGCATTACCGGCGGATTTTTAATTTTTAAAATTTAAATAATATCCGCCGGTAATAGGCGTTACCGGTGGATTTTTTGGCGTGATGTTACCGGCGGATATTATGTTGATTACCGGCGGATTTTCAAAATTTAAATAATAATATTTTTTAAAGCGGCGGATATATCCGTCGGTAATTGCAATTACCGGCGCATTTTTTAAAAATATTCTGCGTAAAATATATCCGCCGGTAAGTGAACAAAATCCGTCGGCAATTTAACAGTCGGAATACAATCCGCCGGTAAGATACTGGGGGATCCAGGCCGCCGGTAACGTGCCAAAATCCGCCGGTAATTTACTGGCGGACTAAATCCGCCGGAAATTGCCTGCCGGAAATGACTGAAATTTTGGTAGTGTTAAAATCATGTTTCTAAGCAAACATTTTCAAATAATCAAACACTCAATCACAAATTTGTTATTTGCAATGGTCACTCTGGGTTTAACTCCTTTGAACATTGTGAACACCTTTTAATTTTCAAAAAAAGCGTAGTATGGCCACTCAGGATTTATCTGTTTGGTCATTATGAACTCCCTTCATTTCAAAAAATATTCAAATAATAAAAAACACCAACACACAAACTTTTTCTATTAAGAACTACGTAGCCTTTGATTCTCTACCTAGAGATACGTAGGAGCGGGGGCACACTATCGTCAAGCACAAAAATAAATAAATTTTGATAGGTCTTTTTAAATTCATTTCATAATAAAAGGGAAATAAATATTTTCAAAGTTAATATGTTTCGCACAATTAATCGGAGGTAGCCTTTTTCGAAAGGATGTTGTGGGGTGCTAATACCTTCCCCACACATAATCAACTCCCGAACCCAAAATCTGGTTTTCAAGACCATTTTCATTTTTAAAGGGATTTTTCAATGTTTTCCCTAATAATTAAATATTAGTGGCGACTTCATTGAACGCGAGAGATCCTCCGGATTTTTCGGGTGCAACAAGGAGGAAAAGAATATTACCTATGAGAGTGTTGTTTCAGTACTTTGAAACCCTTCACGTTCTCAAATCGGTTGAAACGTTTACAAGCGAAACAAACACAGAAGTATTAGGGTTTTACAAGAGGAACTATAAAATAGGTGCAAAATCCAAGAGTGGTGGTTTGTAAACCTTCGCAAGTATTCGCGAGATCTTCGTTTTCATTTCCAGTACATGCGATTAAAGAGAAACCGAATAAATCAAGAGTTACTACGTTAGGGTTCTGAAACAAAAGAAAAGCAACAAAAATAAGAGGGGTTTTGGTAGTTACCTTTGTATCTGTGCTTCTAATCACCATTGAAGCATTCTTACACCTTGAATCTGCAAGATTCATCAAGAAAAATTAAAACCCTAGCTGAGTGTTCAAGAGAGAACAAAAGAAAAGAAAGAAGAAAGAAAAAGAGAGAGAGAGAGAGAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAATTGTTTACCGAATGAACAAGTGAAACCCTAGCTTTTGGGTTTTGTTCATCTGAGGCGGGTCAAAATAACCTGCGTGTTTTATTGTTTAAACACGGGTCTGGGTTCCGCAAAACCCTTTTTGGTGCGTTTGGGCTGAGCCAATTGGGCTTTTGGATTGTTATTCACACCTCCCACTATTTGTATTGTGTTCCAACAGTAAGTATGGCTCGACAAATGTTACTATATTCACGAACCTGTAATGTGCCCATTAATGGGTAACACTCTTGGTGTACTGTAATTTTACCTATTGCCAATAAAAAAGTTTAAACTTAAACTTGTTGATGCTGGATTCTGCACAATGGTGGCTATCCTCCACTGAGGTGGTGGTTGACGGCGACGTACGATAGCTAGCGGCTTTGTACAGCTGTCGGTGTCTTCAAGTCTCCACGTCGGGATGTGTCCCCTACAAAGACACTCTGATGCCTAAGTTAGTATTAGAGCTTTATAAGAGGAGAGCAAGTAAACAGAGTATTTTCAGCTGTTATTAGCTTCTCTCAAATGTAGGGTGAGAACCCCTATTTATAGATGGTTCGTCC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF03479.18	PCC	137	249	7.20E-30

Gene family

Gene family	Subfamily
--	--

Gene Ontology

GO term	Description	Category
GO:0005634	nucleus	Cellular Component
GO:0006355	regulation of DNA-templated transcription	Biological Process
GO:0003700	DNA-binding transcription factor activity	Molecular Function
GO:0016020	membrane	Cellular Component
GO:0015031	protein transport	Biological Process

InterPro

InterPro term	Description
IPR005175	PPC domain
IPR014476	AT-hook motif nuclear-localized protein 15-29

trEMBL

trEMBL term	Description
A0AAN9SDQ9	_

SwissProt

SwissProt term	Description
AHL20_ARATH	AT-hook motif nuclear-localized protein 20

KEGG

KO	Description	Enzyme
K06934	uncharacterized protein

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT4G14465	AT-hook motif nuclear-localized protein 20
Medicago sativa L.	MsG0380015349.01.T01	_
Oryza sativa L.	LOC_Os02g57520.1	DNA binding protein, putative, expressed
Cucumis sativus L.	Csa021695	_
Glycyrrhiza uralensis Fisch.	Glyur000837s00027497.1	_
Codonopsis lanceolata	Cl_chr08_09650T	_
Arachis hypogaea L.	AH06G08790.1	AT-hook motif nuclear-localized protein 20 like

Expression pattern