Gene detail

Detail information of Am02G014620.1 Annotation

Gene ID	Annotation
Am02G014620.1	Translation initiation factor IF2/IF5

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am02G014620.1	mRNA	Chr02	120630216	120633087	-

Sequences

CDS:

>Am02G014620.1
ATGGCCTTACAGAACATTGGTGCTGGAAATAGCGATGATGCCTTCTATAGGTATAAAATGCCTAGAATGATTACAAAAATTGAGGGCAGGGGTAATGGCATCAAAACTAATATTGTCAATATGGTTGATATTGCAAAAGCGCTAGCAAGGCCGGCATCTTACACAACAAAGTATTTTGGTTGTGAACTTGGAGCTCAATCAAAGTTCGATGAGAAAACTGGAACTTCTCATGTTAACGGAGCACATGATACTGCAAAACTTGCTGGTCTTCTGGAGAACTTCATTAAGAAATATGTCCAGTGTTATGGTTGTGGAAATCCAGAAACTGAGGTCTTAATTACTAAGAATCAGATGATCCAGTTAAAGTGTGCTGCTTGTGGCTTTGTGTCTGATGTGGATATGAGAGACAAGCTGACCACCTTCATCATAAAGAACCCTCCAGAAGTCAAGAAAGGATCTAAAGACAAAAAGGCAATGAGGAGAGCTGAGAAGGAGAGACTTAAAGAAGGTGAAGCAGCTGATGAGGAGATGAAAAAGCTGAAGAAAGATGTTAAGAAGAAAGGCTCTGCGACTTCAAAGAATGGCACCACGAAATCTATCACTTCAAAGAAGAAAGCAAATGGCTCTGATGAAGATCGAACATCACCTCCTCACAGTCAAATTGATGAGAAAGATGAAGCTAGTGATGAAAATGAAGAGGATGATGTCCAATGGCAAACAGATACATCACTGGATGCTGCTCGTAAGCGTATCCAAGAACAGTTAAGTACTGTGACAGCTGATATGGTTATGCTCTCTACAAATGAACCAGAGGAGAAGAAGAAAGCAGCGAGTAAGGTAAGTAATGGTTCTAAGAATGGAAACATGACACCCTATGAGACACTGGTTGGTGAAGTGAAAGAGAATTTGAAGAAAGGTGTTTCAGCAGCTGAATTACAGTTACGCCTGGCAAAACTTGATGCATCTGCACAAGAAAAGACAAGTGCTCTGTTTGAAGCCATATTTGAAGGAATTGAGAAAGGTTTTGCAAAGGAAGTGACTAAGAAGAAAAGTTACCTGACGGCTGCAGTTGCTGCTGGGGATGAGGGATTACAGTTGTTATTGCTTCATGCCATTGAGGAATTCTGTTACAAAACTACTAGTGCATCGAAGGAGGTTGCCCTGATTTTGAAAGCACTCTATGATGCTGATGTGATGGGTGAAGAGCATATAGTGCAGTGGTATCATAGAGGGCTGAAAGGTGATAACAAGGACTCTGTGATTTGGAAAAATGTTAAACCCTTCATTGAGTGGCTTCAGACTGCGGAATCAGAGTCGGAGGATGAATGA

Protein:

Promoter(3k):

>AM02G014620.1
AGTTACTTATTAGTAGTTAGTTAGTTTGTTTGTTAGTAGTTAGTTATACAAACTCATCATTATTGATGATTTGGATTTTCCAGCCCTTTTTCATCCAAACTCTTTCTACTAGTAGTTGGTGATCAAACTCAGCACATTTCATTATTGATGATTTGGATTTTCGTTTTCTTTTTTTATCTTTGATTTCGATTTTCTGTTTTTGATTTCGATTCTCTTCTTTTCGTTCTTCTTAACTTTTCCTCTTCAACATTCAAATTTTCTTCCACACCGTTTTCTAAGTTACAAATGCGGTGCGTTGCTGGCCTGTTTATCTTTTAATGGATACTATAAAAAAATTACAGCTTCTTGATCTGATCAGTATGATTTAGGGTCCCATCAATCTTCTTTAAAACTCGCAAGATTATAATTTTGCAATGTGTTTTGTCTGAATTTGATTTTCTGATCTTTCAATTATAATTTTGCTTCCTCCGAGTGGTTATAGCATTGTCGCTTCCTCTGAGTGTTTGTAGCATTGTTGCTTCCTCGGAGTAGTTATAGCATTGTTGCTTCCTCCGAGCGGTTATAGCATTGTCGCTTCCTCTGAGTGGTTATAGCATTGTCGCTTTCTCCAAGTGGTTATAACATTATTGCTTCATCCGAATGCCTTATGGTTTTGATTTCTTCCGATGTGTTTCCGGCATCTTGTAATTTTATTCTGATTTGATATACCTTTGTATTATTCATCCCAAGCTAGAAATGTTGTGAATACCTTCTAGCTTGCGGGGGATTATTAGATATAGTTAGTTAGTTTGTTAGTAGTTAGCGAGTGCCTGTAAATAGGCTTTGATGTAATCATTTTAGTTAGAGCTTTTATCATTTGAGTGAGTGCCTATAAATCTGTTAGCCATAATTTCAACGCAAACAGATTTACGTAATTCCACTTTGCAAATTTCCCGAAGATTTACGTAAATCTGTTATGAAAAAATTTTGTACATCGAATTTATGTAAATCCGTTGCGTCGGATTTCGATAAATCTGTAGGATGTAAATTTCGGACTTACTCTCTCTCAAACGGATGTATGTGTGAAATGAGAAAGGGTTGAGGGTTTTTATTAGGCTCGAGGGTATTTTTGGTATTTCACTATGGGTGTGGGGGGGGGGGGGGGGGGGTATGGTACAAAAAATGCAACCCTAAAATAATAATATAGAGAAATCTACCGAGCCCTAAAACATGGTCCATCCACATCAAGGGCCACGATATATTCATATGGGGTATTGCTTTTCCCACACCCCCTCCTACTCGAAACACACCCCATAAGGGTGTGAAAAGACCAAAAGGCCAGGCCAAACCTCTTTTTTTTCACGAATTTTCACCTGTTCGAACACGGGCATTCGAACAGGTTCGAATGACATCGTTCGAGTGTGTTAAATTTTGACTTCACACCCTTTTGGGCGTTTTTCACCTGTTCGCATGAGGTCATGCGAACCTGTTCGCATGACCTCGTTCGAACACATTCGAACGACATCGTTCGAGTGTGTTAAATTTTGACTTCACACCCTTTTGGGCGTTTTTAAACTGTTCGCATGAGGTCATGCGAACCTGTTCGAACAAGGTCGTTCGAACAGTCATAAAACACGTCCTCGCAGCGTCTCACGCGAGGTTATTTTTGGAATAAAATTTGTTAAGGGGTGTGAAAGAGTAGGAGGGGGTGTGGGAAAAGCAAAACCCTTCATATGGGTAACTTTTTTTTTGGTCCAAATTCATATGGGTTAACAAAACACAAAACGGACTGCGAAGAAATCCCTTTACCCCAACCAACGCTATATATTTCGCATTCACATTCACAGATAGCACTACGCCGCCTCCAAATTCTCAAACCCTATCACCGCACGGCAGCTTCGCATCTCAAGGTACAAAACTTTTCAAGCTTTATTCTCCCTCTTGTTTTTCCATGTATTTTTTATACGATCTGTTTGCATCTTCTGAGGTTTTTCCTCCCGTTGTTTTGCTTGGTGTTATTCTACGTTCTAACAACAATCATCAAAAGTGGTAGCAATAGCATTTCTTTTTGAACTGTTTTTTTCCCTTCAATCTGGAGTTTGTTTGTTTTGTATGTTTGCAATTTACATTACGACACGAAATTGTTAATCGTTTTTTATAAATTGGAAACGAACCCCGGGGAATAATTAATCGTTAATCGCTAATCTTTGAAACTCAAAATTTTCTGATGTACTTGTGCTTGTGTTTCTCGAGACGATGATATTTTATTGAAACATTGTTAACAACCTTAAACTTTCCTATTGCAACTAATTGCTTTGTAGCCTAGCAAATAACTGACTACTTTTAGGAGATTTATGTTCTTATAATGACTGAGGATCATGTAGTTTGTTTACTTGTCATGCAGAAAGGGTGCTAATCTTTAACAGAAGTCATGAATGTTTGATATATACTTCGGGATTCATATGAATCTGTTTTATTATTTAAGCAATGAGTAATGCTGCTACATTATATAGATATGCAGGTTTGGTTAAAAGATACCCATAATAGATATTTTTAAAGAGAACATTTGTATGCAGGGTTTTATTGGGGTAATAATCATTTTTTTTCTGACTTTGGATTGTAGACGTCAGTCAGCCTTCCGTCATTCTAAATTATTGAATCTCCCTGTTGCTGGCTTGGTTTTCCTGAAAGTTTTGGTGTAGCAGAGGTCAAGGTGAAAGCTCCACATCAAAGTCTCTTTCATGTTTGAACAGGCTACTATCCATTTTGGAGCAATTGAGTTACTTGAAGATTCTTGTTCTAGAAAAAACTACAGACCTGTGCCTCAGAGAGTTAGCTGTATGCATCGTGAGACATACCATATATTGTCTGAGTTATCTGGTTGCGGTTGGCCTCCATCCATCTTTGTAGAAGGGAAATCTTCCAGAGCACAAGTTTCCTTAGAGGCCGACACCGAAGCTACTATAATCCAATTTCCAGCCTATCTTGCCTCTGAAGATCTCTGAAACTTTGCAAGTCACC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF01873.20	eIF-5_eIF-2B	11	127	3.90E-37
PF02020.21	W2	365	442	7.00E-22

Gene family

Gene family	Subfamily
--	--

Gene Ontology

GO term	Description	Category
GO:0003743	translation initiation factor activity	Molecular Function
GO:0005092	GDP-dissociation inhibitor activity	Molecular Function
GO:0002181	cytoplasmic translation	Biological Process
GO:0022618	protein-RNA complex assembly	Biological Process
GO:0005525	GTP binding	Molecular Function

InterPro

InterPro term	Description
IPR003307	W2 domain
IPR016190	Translation initiation factor IF2/IF5, zinc-binding
IPR016189	Translation initiation factor IF2/IF5, N-terminal
IPR002735	Translation initiation factor IF2/IF5 domain
IPR045196	Translation initiation factor IF2/IF5
IPR016024	Armadillo-type fold

trEMBL

trEMBL term	Description
A0AA86S1L8	_

SwissProt

SwissProt term	Description
IF5_PHAVU	Eukaryotic translation initiation factor 5

KEGG

KO	Description	Enzyme
K03262	translation initiation factor 5

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT1G36730	Translation initiation factor IF2/IF5
Medicago sativa L.	MsG0780039985.01.T01	_
Oryza sativa L.	LOC_Os06g48355.1	expressed protein
Cucumis sativus L.	Csa021768	_
Glycyrrhiza uralensis Fisch.	Glyur000617s00023877.2	_
Codonopsis lanceolata	Cl_chr02_65420T	_
Arachis hypogaea L.	AH05G23240.1	Eukaryotic translation initiation factor 5 like

Expression pattern