Gene detail

Detail information of Am02G013700.1 Annotation

Gene ID	Annotation
Am02G013700.1	ADP-ribosylation factor C1

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am02G013700.1	mRNA	Chr02	114826562	114829261	+

Sequences

CDS:

Protein:

Promoter(3k):

>AM02G013700.1
TATGTCAAAAAAACCTAAGGGGCGACCTCATAATCGATAAAAGGAGATGACTATATAAGACCCCATATTCGAAGAAAATTAACAAAATAAATGAGACTCTGAGGGACGACCTCGTAAAAGACCTTAATTTGTAAAGGGCGGCCTTGTACGAAGCAATGAGGGGCGACTATGTAAGACCCCACATTTGAAGAAAGCTTAACAAAGTAAATACGATCCTAAGGGCAACCTCGTAAAAAGTGTGGTTCTACTGACTTTGGGGATTTTGTATCCCTAAGTTTTTTTTTTGTTTTTTTTTATAATCGTGTCTCTAAGTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATCACCATTTATGGGTCTTACGTAGTCACCCTTTTGTATAAGAGCCTTTAAGTATACAACTATTTATGTAGGGTCTTACATAATCGCCTTTGTCTTCAAGTATACATCCCTTTAAGGGTCTCACGTAATCACCCTTTTGTATAAGGGTCTTTATGTATGATGGTCTCCCTTTATGTATTAGGATTTGGGATAATCACCTTTATTGTCGATCATGCTTCCCGCGAGGATGTTACAATGTCGCCTCTTTGATGCCTTTAAGTATGGGGGTCTTACGTGTTTACCCCCTTATTGTAATCGTCGTTTGGCATCTTTTCAATGAGTCATATATGTAAAAACAAAGTAAATATACTTACCGAAAGGAAATTAACAAAATATGATTTACCGAAAGATTATATTCATGGCGATGTTCGATCTTGAGATGGCCGTGTTGTACCTGCAAGAATACTCCGACGCTCAAGTCAGTATTTGAGTGAATCAATGTTTAGTTTTAGAAGTTTCTTCCATTTATGAGTATTGAATGTGGTATTTATAGAGATTGAGTGATGTTCGTTCTGACGATCCTGAGTTGTTAGATCTTGCAAAGGTATCTGAACCGTTGATTGATTGGGCCATATTTTCTGGATATGGACTGGTTGGTTATTGGGCCTCGCAGGGGGTGTAAATATCATTAAGACCTTTTACTTACTACCATAACAATAGCCCAATGAATATACTTACAATGCATCACATTTTATATAAAGGGAATTAACAAAATATGAAACCTAGGATCTATACATGTGGTTTTGGTAAATGACTTCTTTGAACCCCTTCGCTCCAAACTCTATTAGTGTGAAGGAATGTTCCTCCATAATTGTTTGTAGGATAGGCCCGAGCGATGCTTGTGGAACGACAATGACAATCAGGGGATCCTACTTTGTCTCATGCTACCTTTGTTGCAGATTATGGGGAAATGTGCCACTTTGACCGTTCCAGATTATTGAAGACTGGGTCACTTTTAGCGACAGATTTCCCTCACTAAATCTGTCGCTAATTGTTAATTTTTTTTAGTAAACCCGAATTCTTTCTTTCCTCTTTCATTTCTTCCTCTTCCTCTTTCATTTCTTCTTCTTCTCCGTTTTCTTTTCCTTACCTCACGGAAATCTCTCCCTTTTCACCACCACCACCACCATCATCTTCTCCCTTTTTTCTCTCTCACGAACCATCTCTCTCTCACGAACCATTTCTCTCTCTAACCGTCCCCCTCTTCCTTTTCACCACACACACCACCACCACCACCACCACCATCATCTTCTCCCTTTTTTCTCTCTCATGAACCATCTCTCTCTCACGAACCATTTCTCTCTCTAACCGTCCCCCTCTTCCTTTTCACCACTACCACAACCACAACCCCTCTCTCTCACTGGAGCTCTCCCTTCACCACCACTGAGCAACCACAACCGGAATCAGATGATGCCAATGTACAAATTCATGCTGTTAAATTGGTGGCCAACCTAGCAGCAGAAGGTTGAAGCCTTATTAAGGAATTCTGGACATTTATTTTTCTCAATGCTAAAAGAATTCTGGACTACCAAAGGCTGTCTGAACTACCAAAACTAGTAATATGGGAAGCATTTTTTTAAAAAAAAAACTAGGTTAGCGACGAATTTAGTGAGGGATTTCCCTCGCTAATTAGCGACGAATTTAGTGAGGGATTCCCGTCGCTAATGTTTAGCAACTGAATTTAATCCATCGTTAAACATTAGCGTCAAGGTTTTTAGCAACTGATTTCGTCCGTCGCTAAAAGAGATTAGCGAGGGAAAAACAGCAGTTAGTGAGGGAAAATTCCATCGCTAATCCACTGTTTTTTTGTAGTGCTTATGAGCGACTTGGCTATGCCACTAAAATTGCATAACTATTTTCCTTAGGAATTACTTGTATCTCTTGGCGATAGATGGTATTGGTTGGAGCCTTGGATGTCCATACAGGAGCTGGCTTGCGCTGATGAAGCTCGTTCCCTTCACGCTATTCTTCAAGACGTGAAACCAACGAGGGATGACTGTGACACTTGGTTGTGTAATTTTGTCTATTTCCACGTGGTGGATTAACCCTCTTACGTGCCTAAACAATGTGTAATTTTGTATTGTTGTTTGGGTTTGAGCACCCCTAGTGCTCCCTTAATGAAATTTTGCTTATCCAAAAAAAAGGTCAAATTAATCCCTTTACTGATTACTCGCTGTAATTAAAAATAAAAATGCAAACTGTTGACATCATATGAATGCGGTCCGCGTCATCCCCGGAAACCTCATTTATATTCTTTTCTTTCTTCCATCGATAACGATAACCAAATCAAAATTAAAATTTTCGTTCACAAATCCGGAAATCGGTGTCCAGGTTTCCTCTTCATACGATTCCAATTCACACAACAAGCAACTCCGATTCTCCTTCCAATCTCAACAGCGTTGCCAGGTTCGATCGTTTTCCTTCTTCGCGTTCTTTTTCTATTTGCACAATTTACGATCTGCATAATTGATATCGATCCAAAACAACTTGAATGGAAACTTTTTTTCCTGGGTTTCTGATTGATGGGTTTGGTGTGTTGTAATTATTCATTCAGGTCGGGGGGAAGTAATAGTAGATAGATAGAA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00025.24	Arf	14	176	2.10E-65
PF08477.16	Roc	19	129	9.00E-14
PF00071.25	Ras	19	174	4.20E-12
PF09439.13	SRPRB	18	143	1.30E-10
PF01926.26	MMR_HSR1	19	123	3.80E-06

Gene family

Gene family	Subfamily
--	--

Gene Ontology

GO term	Description	Category
GO:0005802	trans-Golgi network	Cellular Component
GO:0003924	GTPase activity	Molecular Function
GO:0005525	GTP binding	Molecular Function
GO:0016192	vesicle-mediated transport	Biological Process
GO:0006886	intracellular protein transport	Biological Process

InterPro

InterPro term	Description
IPR005225	Small GTP-binding protein domain
IPR006689	Small GTPase superfamily, ARF/SAR type
IPR024156	Small GTPase superfamily, ARF type
IPR027417	P-loop containing nucleoside triphosphate hydrolase

trEMBL

trEMBL term	Description
A0A151U5M7	_

SwissProt

SwissProt term	Description
ARL5_DICDI	ADP-ribosylation factor-like protein 5

KEGG

KO	Description	Enzyme
K07950	ADP-ribosylation factor-like protein 5B

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G22950	ADP-ribosylation factor C1
Medicago sativa L.	MsG0180004176.01.T01	_
Oryza sativa L.	LOC_Os11g37640.1	ADP-ribosylation factor, putative, expressed
Cucumis sativus L.	Csa010219	_
Glycyrrhiza uralensis Fisch.	Glyur000129s00012465.1	_
Codonopsis lanceolata	Cl_chr08_11720T	_
Arachis hypogaea L.	AH19G24940.1	ADP-ribosylation factor-like protein 5 like

Expression pattern