Gene detail

Detail information of Am02G013010.1 Annotation

Gene ID	Annotation
Am02G013010.1	Mitochondrial transcription termination factor family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am02G013010.1	mRNA	Chr02	110324424	110327401	-

Sequences

CDS:

>Am02G013010.1
ATGAAAACTTTCTCCTCAATTCAACTACCCCAACATTTCCCTTCCGCAAGATTTTTCTCTTCCACTCCCATGAGGACTCAGCTTCCTTTCTCTGCAAAGGTCTTCTTTTGCCAGGCAAAATCTGGTGCTTTTTACTCAGCCACAGATGGGTCAGTAAACATAAAAGTAATGCCTCCGACCTTGTTAGTAGCAGAAAAAGAAGAAGCCAAGGCTGTATTGACCTTATTTTTGAAGAAACAAGGTTTGAGCAATGCAAACGCAGCAAGAACCATCAACAAGTCTGATCCTTTTGTTGATCACCTTATCTCAAAGCTTCACTCTAAACACAAAACTTGGTACCTTTCAGGGAGAGAGCTTACAACTCCTGAGATCCGAGATGCTCTTATCTCTTATCTTGAGTCCCTTTTTGAAGAACACGGCAAGATTCTAGTCGATGTAGTGGAAAACTATCCAAACCCACCTGTTAAGGATAAATCATCTGTGCCAATTCCTCCACCTAGTCCTAGCCCTGTGGTAGACTCTAAGAAGCTTAAAGCCACATCTCAAGTGAGTGTCATAGATCCTGTTGCAGGCAATCTTCGCCCTCATATTGTTTATCTCGTTGAGCTTGGCATGGATATTGAGAAGATTAGGACTATTACACGACGATTTCCAGCTTTTGCTTACTATAGCTTGGAAGGTAAAATTAAGCCAGTGGTTGAGTTTTTTCTTGAACTTGGAATTCCAAAAGAAAAAATCTCCATTATCCTCTCTAAAAGGCCTCAATTATGTGGAATCAGTCTATCTGAAAATCTTAAACCCACCATGACATTCTTAGAATCTTTAGGTGTTGACAAGAAACAATGGCCAAAGGTGATCTACCGTTTTCCGGCTTTGCTAACTTATAGCAGGCAGAAGCTCGTGGAAAGCGTAGATTTTCTCCTTGAATTGGGCCTCTCAGAAGAGAGCATAGGTAAGATTTTAACTCGCTGCCCGAATATTGTTAGTTACAGTGTAGAGGACAATCTCCGACCGACAGCAACGTACTTCCGTTCTTTGGGTGTTGACGTTGGTGTTCTTCTATTCAGGTGTCCACAAAATTTTGGACTTAGCATTGAGGCCAATATAAAGCCTGTAACAGAATTTTTCTTGGAGAGGGGATACACTTTGGAAGAAATTGGGACTATGATTTCAAGATATGGAGCCTTATACACTTTCAGCTTGAGCGAAAATTTAATGCCAAAATGGGATTTCTTTTTGACCATGGATTATCCAAAATCTGAGCTGGTTAAATTCCCTCAATTTTTTGGATACAGTTTAGAACAAAGGATTAAACCGAGATATGCGCGTGTGAAAAACTGTGGGGTGAGATTACTACTGAACCAGGTTCTTTCATTGTCAAGCAGCAACTTTGAGGAGACCTTGAAAAAGAAAATGAAGAAAATGCAAGTTGATTAG

Protein:

Promoter(3k):

>AM02G013010.1
TAGAGCTTGAATCAGTTTCGCTTCCTTCGTGTTGATTCCGACATTGAGGTGAGTTCTTCACGAATTTGTGTACTATGTAATGTTCTAGTTGTTTGTATGTTGAATTCAAGTCATTAAAACCGTTATTTTTGGATTGTGTCGTGTTTTGATGTGATTCCTATACATTGAGGTTTTACGGTTTTAATTGATAATTGATGGCTTGAAATTGATTGTTTGAAGTGGCTATTGTGGCTGTTATGGACTGTGTTTGAGTTAGGAATGGAGCGGAATAAGTAACAAAATAGCGGATTTCACGAAAACGCAAAATTTTGGGAAGCTGGTGCATAGACTCGACCCGTGCGCCTCCAAGCCCGGGTCGTGCGCCTGGGTCTGACACCGTCTTCCTAAAATGAAATTTTTGCGCCCTGGTCGTGCGCCATTGAGCACGGTCCGTGCGCCCCCTGCTGACAGCATTTTCAAAAGTCGGTTTTCTACCCCCGTTTCGATGCGATCTCATCTCCATTCCTTTTCTTAACCCTTCCCATTGATGATTGAATATGTTTGAACTCCGGATTGTTATTTTTATGAAGCGAAATAAATGATATATGATTATAGCGTTGAAACCGTTCGACTAGTTATGTCTGAGAGAGAACATAACAATGTTTAATGAACAAAAATGATTTGGTATCTACCCCCCCCCCAAAGGATTTGGTATCCATATGAGGCATTTGGTATGCCATTAATCGGAATTTGGGGTCCGAACGAATATAATCTTCTCAAAGGATTTGGTATCCACATGAGGCATTTGGTATGCCATGAATCGGATTTACATCTACTCTTCCCAAAGGATTTGGTATCCACATGAGGCATTTGGTATGTCATTAATCGGAATTTGGGATCTGAATGAAATATTAAATAAAACACCGTGAGTAGAGTTGTGAGGGGTCACGAAAGAGCTCACTGAGATTATTATCTCACTGTTTATGTTTGTGTGTTTACAGATAAACAGGGAAAAGCAAAGGACAAGAAGAATAGGTAGCAGCTGATATGAGTCACAGAGACTTGAGGGATCTTGGAGATCCGATATTTACTTTGCTTAGTTCTCTAGGTTTATTATGTACTTTCGATATCATGACTTGAAATGTGTATTAAAGTTGTGTATCGTTTATGTAATTCTAGTTGAGATAATGAACAATAGATGGATAATGACTATGAACCTTTGGTTCATAGTTGTTGAGTAACCCTTTTTGAACTCATGGTGGTTTAAAGGGATTATTAGATGAGTTGTCATCAATGCTTAGTTATGTTTGATGTCTTGATTTAGAATTAAATTTGAATATTCTGGTATTTCTTCTAAGTTCGAAATATCAGGGTGTTACACAACTCTTTTAGAAGAGTCCCCTGTTCTTGGAGGCCGCCAAAACCCCTTTATGACAAAATCAATTCAAATGTGGCTTTTGATAAATCTAATGGTAAAGGAACAGTTAGGATAGTTTGTAGGTACTATTCTAACTGTGTCGTTCAAGAGAATCTTTGCTTCTCCCCCTTGTGGCTGAAGCTCTCAGTCTTTGCGAAGCAGCATCTCTAGGTCGCAACCTCCATCTTCAAAGTGTTATTCTTGAATCGGATAACCAAGTCCTCGTGGAAACATGCAGAGGTAATCAGATTAAATCTGAGATCGAGGGCTTAGTAGAATATATAAACAAGATTAGAGAAGATTTTGATGGTTGTGGGATTATCTGGGTGGCTCGAGAAGGAAACACAGTGGCGTGTGTCATTGCAAGCTTAGCTCACCGAGGATTGCTCAATGGGAATTGGCTTCATCAACCTCCAAAAGATCTTTGATTGGATGTTTTTCGTGCTTGTCAACACTTGATGACGAGTTTAGGGTGAGATTTTGAGGTTCTGGTTGCTTGATTTCCCATGGCAGTGCCTTGAGGATCTCCTCTCATTTTCGATTTTGCTTTGATATCCTTGGGGTGCTAGGGTTTCTCTTTCTTCCATTTTAGGGTAAAAATCTATCTCATCTTAGCTTTCTCTGCATAACATTACTTTTGACATTAATTACCCAACAACTTGTACTTGTTTAGCATCTATCTTTGACCTGGGTTGGGTCCTATTCTGGGTTGGGTTTTAGTTTGCGCCTTCGGTGCTATATCGGGCCGAGTCTATGTATTTGCTTGTTTAAGTCATGGGTATTGCTTTTCCCACACCCCCTCCTACTCGAAACACACCACATAAGGGTGTGAAAAGACCAAAAGGCCAGGCCAAACCTCTTTTTTTTCACGAATTTTCACCTGTTCGAACACGGGCATTCGAACAGGTTCGAATGACATCGTTCGAGTGTGTTAAATTTTGACTTCACACCCTTTTGGGCGTTTTTCACCTGTTCGCATGAGGTCATGCGAACCTGTTCGCATGACCTCGTTCGAACACATTCGAACGACATCGTTCGAGTGTGTTAAATTTTGACTTCACACCCTTTTGGGCGTTTTTAAACTGTTCGCATGAGGTCATGCGAACCTGTTCGAACAAGGTCGTTCGAACAGTCATAAAACACGTCCTCGCAGCGTCTCACGCGAGGTTATTTTTGGAATAAAATTTGTTAAGGGGTGTGAAAGAGTAGGAGGGGGTGTGGGAAAAGCAAAACCCTAAGTCATATGGTAGTGTTTGGTTCATTTAGCTTGGACTTCGGCTTTTGGGCCAGTTTTGTGATTGTAATAGTTTGGGCTTTGCCCACTTAACAATGAAAATCATACGATCTAGACAAAAAAACACTTCTATGACCGGAAAAACTTCCTTGACCCAAAAAAGCCACAAACTCTCTAACAATGACACGTGTAATATGTCTAAGAGAGACACGTGAAAAAAGAAATCCTAAGTTGTAAATTATTTTCCCTTTGGTATCTTTACCTTACCTTATCCTCGTGATTACGTTGGTTGTTGTCGATTTTTGCTTAACACAGTGATGAGATATTTCTCTAACACTCCAACTCAGAAACCCTTCTCTCACTCACAAAG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF02536.17	mTERF	192	371	2.20E-60
PF02536.17	mTERF	304	465	2.20E-60

Gene family

Gene family	Subfamily
Transcription Factors Family	mTERF

Gene Ontology

GO term	Description	Category
GO:0043565	sequence-specific DNA binding	Molecular Function
GO:0042793	plastid transcription	Biological Process
GO:0009658	chloroplast organization	Biological Process
GO:0009737	response to abscisic acid	Biological Process
GO:0009651	response to salt stress	Biological Process

InterPro

InterPro term	Description
IPR003690	Transcription termination factor, mitochondrial/chloroplastic
IPR038538	MTERF superfamily, mitochondrial/chloroplastic

trEMBL

trEMBL term	Description
A0A1S2XDT4	_

SwissProt

SwissProt term	Description
MTEF5_ARATH	Transcription termination factor MTERF5, chloroplastic

KEGG

KO	Description	Enzyme
K15031	mitochondrial transcription termination factor family protein

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT4G14605	Mitochondrial transcription termination factor family protein
Medicago sativa L.	MsG0280007873.01.T01	_
Oryza sativa L.	LOC_Os02g39040.1	mTERF domain containing protein, expressed
Cucumis sativus L.	Csa010276	_
Glycyrrhiza uralensis Fisch.	Glyur000091s00010527.1	_
Codonopsis lanceolata	Cl_chr05_02580T	_
Arachis hypogaea L.	AH13G57380.1	Uncharacterized protein like

Expression pattern