Gene detail

Detail information of Am02G012190.1 Annotation

Gene ID	Annotation
Am02G012190.1	Ribosomal protein S5/Elongation factor G/III/V family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am02G012190.1	mRNA	Chr02	104738437	104742813	-

Sequences

CDS:

>Am02G012190.1
ATGGAGGAAGGAACTTGCGAAAATGGTAGACACAAAATCCGCAACATATGCATCATGGCACACGTAGACCACGGCAAGACAACGCTAGCGGACCAGCTTATTGCGACGGCGGGCGGCGGCATGGTTCACCCAAAAGTTGCAGGTCGTGTCCGTTTCATGGATTTCCTCGACGAAGAACAGCGTCGAGCAATCACGATGAAGAGTTCCTCCATATCCCTCAACTACCACGATCACACAGTCAATCTCATCGATTCCCCCGGTCACATCGACTTCTGCGGCGAAGTCTCCACCGCCGCTCGTCTCTCCGACGGTGCTCTCCTCCTCGTCGACGCCGTCGAAGGCGTCCATATACAAACTCACGCTGTTCTCCGTCAGTGTTGGATCGAGCAACTTTCCCCTTGCCTTGTTCTCAATAAGCTTGATAGGTTAATCACTGAGTTGAAACTCACTCCCTTAGAAGCTTACACGCGTCTCTTGAGAATCGTTCACGAGGTTAATGGTATAGTAAGTGCTTACAAGTCGCAGAAATATCTTTCCGATGTTGATTCACTCCTCGCCGGCGGGACGGCTACATCCGGTGAGGTTATGGAGGATTATGATGATGTTGAGGATGTGTTTCAGCCACAGAAAGGGAACGTGGTTTTTGCATGTGCTTTAGATGGTTGGGGTTTTGGTATTCATGAATTTGCAGAAATTTATGCTTCAAAGCTTGGGGCTAGCGTGAGTGCATTGCAGAAGGCATTGTGGGGTCCACGGTATTTTAACCCTAAGACTAAGATGATTGTTGGGAAGAAAGGGATTAGTGGTGGTGGTAAGGCTAAACCTATGTTTGTTCAGTTTGTGTTAGAGCCTTTGTGGCAAGTGTATCAAGGGGCACTTGAAGGGAATAAAGGGTTGCTTGAGAAGGTTATTAAGTCGTTTAATTTGCAGGTTCCGGCGAGAGAGTTGCAGAATAAGGATCCTAAGGTGGTTCTTCAGGCAGTTATGAGCCGTTGGCTTCCTCTTTCAAATGCTATTTTGTCAATGGTGGTGAAGTGTATGCCGGATCCTATTGAGGCGCAGTCCTCTCGAATCTCGCGGTTGATTCCTCAGCACGAGGTTATTGGGGATGAGGTTGATGAGGTTGATCGGAAGGTGATGGAAGAGGCGGAGGTTGCGAGGAAATCGGTGGAGAGGTGTGATTGGAGACCTGAGGTTCCTTGTGTTGCCTTTGTGGCAAAGATGTTTGCTCTTCCAGTTAAAATGCTTCCTCCTCAAGTGGGGGGTTTTGTGGGGAGTTCTGCTGAGGATGGAGAGGGTGAATCCGATGAGTGTTTTTTGGCATTTGCTAGGATTTTTAGTGGGGTTTTGTCTGTTGGGCAGAGAGTTTTTGTGCTTTCTGCTTTATATGATCCCTTGAAAGGGGAACCAATGCAAAAGCATATACAAGAGGCTGAAATGAAATCCATGTATTTGATGATGGGGCAAGGGTTGAAAGTAGTGACATCTGCCAAAGCTGGAGATGTTGTTGCTATCAGAGGCCTTGGGCAGCATATATTGAAAAGTGCTACCCTTTCTTCTACTAGGAACTGTTGGCCCTTTTCAAGTATGGCATTTCAAGTTGCTCCGACTTTGAGAGTTGCAATTGAGCCATCTGATCCTGCAGATATGGGTGCATTGCTTAAAGGCTTGAGGCTTCTCAATCGAGCCGATCCGTTTGTTGAGGTCACGGTTTCTGCAAGAGGAGAGCATGTTCTTGCTGCGGCTGGTGAAGTTCATCTTGAGAGATGTATAAAGGATTTGAAGGAGAGGTTTGCTAAAGTAAGCTTGGAAGTATCTCCCCCGCTTGTGTCCTACAAAGAGACCATTGAGGGAGAGGTATCCAACATGTTGGAGAATTTGAAAATTCTTAGTAAGACCTTAGATTATGTAGAGAAAACAACACCCAATGGAAGATGTGTTGTTCGCGTGCAGGTGATGAAACTTCTCCCTTCTCTCACGAAGGTGCTCGATGAAAGCGCTGATTTACTTGGGGATGCCATTGGATTAAAGTCGGGGCAGACAGTTAGAAGTTTGGAAACCCAGAGACAAAGTACTCTGGAAAATGCTAGTCCAGCTGAAGTGCTTAAAAAACGTATAATGGATGCAGTGGAGAGTGATATTTTGAGCAAGAATGAGAATGACAAAGACCATGCTGAGAAATGTAGATTGAAGTGGCTAAAGCTTTTGAGGAGAATATGGGCACTTGGACCGAGACATATCGGTGCTAACATTCTATTTACTCCTGATATCAAAGCAGAAAGTACTGATAGCTCGGTTCTTATACGTGGTTGTTCTCATGTATCTGAAAGGTTAGGGTTTGTGGCTGAATCTAGTAATAGTAGCTCGGTTTCAGAGACTTCGAACGAGAGCGGAGTTTTATACATGGACGCCGAGCGTCTTGAGAGTAGTGTTATAACTGGGTTCCAACTAGCCACTTCAGCTGGGCCCTTATGTGATGAACAAATGTGGGGTTTGGCATTTGTCATCGAGGCGCGAATAACGTCATCTCCAGGGCAACATGATGAATCAGAAACACACCATCAATCCGATCAGTATGGCATCTTTGCAGGGCAGGTAATTGCAACTGTCAAAGATGCTTGTAGAACTGCTGTGCTTCAGAATAAGCCGCGGCTTGCAGAAGCAATGTACTTTTGTGAATTGAATACTCCTACTGAATATTTGGGTCCAATGTATGGTGTACTTTCTCGAAGACGGGCTCGAATTTTGAAGGAAGAGATGCAGGAAGGTTCCCCTTTCTTCACTGTGCATGCATATGTTCCTGTTTCTGAGAGTTTTGGTTTTGCAAATGAGCTTAGAAGGTGGACTTCAGGTGCTGCAAGTGCACTTCTTGTCCTTAGCCATTGGGAAGCACTGCCTGAGGATCCTTTCTTTGTACCGAAAACAGAAGAAGAAATTGAAGAGTTTGGAGATGGTTCTAGTGTTCTTCCAAATACAGCAAGAAAATTGATTGATGCAGTCAGAAGACGCAAGGGCCTTCCCGTGGAGGAAAAGGTAGTACAGCATGGAACCAAACAGAGGACACGGGCTCGTAAAGTTTGA

Protein:

>Am02G012190.1
MEEGTCENGRHKIRNICIMAHVDHGKTTLADQLIATAGGGMVHPKVAGRVRFMDFLDEEQRRAITMKSSSISLNYHDHTVNLIDSPGHIDFCGEVSTAARLSDGALLLVDAVEGVHIQTHAVLRQCWIEQLSPCLVLNKLDRLITELKLTPLEAYTRLLRIVHEVNGIVSAYKSQKYLSDVDSLLAGGTATSGEVMEDYDDVEDVFQPQKGNVVFACALDGWGFGIHEFAEIYASKLGASVSALQKALWGPRYFNPKTKMIVGKKGISGGGKAKPMFVQFVLEPLWQVYQGALEGNKGLLEKVIKSFNLQVPARELQNKDPKVVLQAVMSRWLPLSNAILSMVVKCMPDPIEAQSSRISRLIPQHEVIGDEVDEVDRKVMEEAEVARKSVERCDWRPEVPCVAFVAKMFALPVKMLPPQVGGFVGSSAEDGEGESDECFLAFARIFSGVLSVGQRVFVLSALYDPLKGEPMQKHIQEAEMKSMYLMMGQGLKVVTSAKAGDVVAIRGLGQHILKSATLSSTRNCWPFSSMAFQVAPTLRVAIEPSDPADMGALLKGLRLLNRADPFVEVTVSARGEHVLAAAGEVHLERCIKDLKERFAKVSLEVSPPLVSYKETIEGEVSNMLENLKILSKTLDYVEKTTPNGRCVVRVQVMKLLPSLTKVLDESADLLGDAIGLKSGQTVRSLETQRQSTLENASPAEVLKKRIMDAVESDILSKNENDKDHAEKCRLKWLKLLRRIWALGPRHIGANILFTPDIKAESTDSSVLIRGCSHVSERLGFVAESSNSSSVSETSNESGVLYMDAERLESSVITGFQLATSAGPLCDEQMWGLAFVIEARITSSPGQHDESETHHQSDQYGIFAGQVIATVKDACRTAVLQNKPRLAEAMYFCELNTPTEYLGPMYGVLSRRRARILKEEMQEGSPFFTVHAYVPVSESFGFANELRRWTSGAASALLVLSHWEALPEDPFFVPKTEEEIEEFGDGSSVLPNTARKLIDAVRRRKGLPVEEKVVQHGTKQRTRARKV*

Promoter(3k):

>AM02G012190.1
TTCAAATATTCAGATCAAATTTCAAATCACTCAAAAAAAATGGCTCACAAATTGAAATTGTGTGAGAAAAAAATTGTACCAAAATTTGATTGAATCTTGGCACAAAAACTGAATTGAGATTCAAAATTTTTAAGATTCATGTAGCTCTGAATACCACTTGATGTGAATCCACACATTCATCACTAAATTTAGGATCTAGAAAATTACAAATCTATATGAATCTCTAAGTCATGATGATGAACAAGAACAGAATTTCAAGATTAGATGATGACACTTACTTGAAGAACCCAAAAGTGAAGAAAGAATCAAATGTGGAAAGAATAGAGATGAAGTGGAGAATGATGTCCGCCACTTCTTCCTTGGGAAGAAGATGAAGACCACACGCCGCTTTGAGCTTCTCCAAGCCTCAAAGGTAGGTGCTCAAGGTTCCATTCCAAGAACCAAGGGAGAGAAAAATATGCTCTCAAAAATTAAAATTTTATTTCCTCCAAAGTCCCCTAATTACAAGGAGTGGAATAGTATTTATATGTTGGGTCTAATGGATCCTAAGCCCAACATACAATCCACTTAGAGATAGGAAAACAAGGCCCATGGCCACATCAAAGTAACTAACGACCTTAACCTATTCTATTGCCAACAAGGCTCAAATCAAAACCACATTACACTAGAAATTAAATCGTACATTTATTGAAAACTATTACAAGGAAATAGAAAACCCAAGAGTTTGGGACGTAGGAATTTCCCAAAGTAACCTTGGTAATTACAAGTCTCGATATTTATGACTTCCATCCCAGCTCTCATAAGTAGGCTAGCCATGCATGTGGGCTCACGTCAGGCAGTGCCATAAAGGAATTTGCAAAAGAAATACATAAGGAAGGCAGTGTGCTCCTCTTCAGTGATAGTGGCTTCAGACTTGGAATTCGCAATCAAAAACTTTGAGAAGACCCCTCTAGCATGGACAGGCCTAAGTTCACCTTCCTGGGTAGTCTTGTAGGATGGACGCATCGACCAAATGCGGGCAGGCCAGTGATGGCAGCCACGTCCAAAATGGTGGGGGTGACCACGCCCCAGGGGAACATAAAAGCATTGAAGGTGGAAGACCAGAAACCCAGGAGAGGCAAAAGAACGTCAAAATTATGGGGGATGGCGAAGGTAGAAAAAGCGATCATGTCACGAACGCCCCAGGCTTTCCAAGCATCTTTCTTGACAAGATGAATCCTGTCGAACCAGGAATGGTAGTCTTCAGTGGGTTTGGCCCAACCCCTGGTTTCTGACACCTTGGTGTCAATGGTGAACCAATCTTGGGTGATCGGTATGCCGGGACAAGCCGAAGCGTGGAAGGTTTGTTTGAAGGCATCAAAGCCTTCACGGACAGCAGAAGTGGTAGGCCGCACTGTAACACCGCCTGAGACGGCAACAAGGATATCTTGTGGAGAAACCTCAGAGGGAGCATTCGCCGAAGATGGACCAGAGGAGGAAGAACTCGATTGGCTGTCATCTCCGCCATAACTGTGTTCACAATTTTGAGAGTCTGAGTTTGAAGACATGGTGGCAAGAAGTGACGATAATGGAGAGAAAGGGTTCTGGTTCCTAAAAGAAGAAACTAAAGAGCGAGACGTTTCAAGAAAAGTGAATAGTCATGTGTGGCTATTTATGGTTTTCGCAAATCTTGGGAATCGTTGCGCTGCCCTAATTTCTCGCGGAAAGGAAAACGCCAAGTGTCACCAAACGGCATGATAGTCACTTCAAGACGGTCACATCAAGTCATCTCAAGAGGTTTTTTTTGCACTATCAGTTACGTCCTCGCGGCCATACTACAACACAAAAAGGGGGGCAATTGTTAACACCCAAAAATAATTAGGTCGTAGGTCGAGGGCTGAATAAAGAAGGCAGTGGAGCTGGAGTACTGAGGCAGGTCATTAGACAAGGGTTTTTAAGAGATAATTACTTGAGAAAATGATCAAGAGAAGCCCTCGGGGCATATCACTAGATAATTCCCCGAGGAAGGGGTTAGCCTGAGGAGCAATGAGCGAGACCAAGGGAGAGTACAGCCTCAACCTATAGAGTGCCACGGCCAGGGTAGGCTCGGGTGCCTGAGTTACTGTATGAGGACGAAGGTTAGCTTGAGTAAACCAAGTGGCCGAGGTAAGACGGTTTTACTTGGAAGGCACGTAAGAGACATGCACGAAGATAGAACGTGGGAACGGTTGAAGATCAAGCGAAGGAGCGAAGCCTGGAAGAGCGGAGTGAGGGAGTTCACCCCACTAACCGTGCTAGTGAGATCGTGGGTGGTTACTCCGCCTCCTTAGGGTTTAGGAACAATGATAGTCGTTGATCTTAGATTGATCCAACGGTAGACAAATGTTGGCTATGGTAGTGGCCGACGAGGGCCTATGTATATAAATAGCAGAGTAATTGTACAAAATGGACAATCAATCAATCAAAAAACTCTACGTTTATTTCATCTATCTGCTTTTATCGCACTTTATCTTTATTTTTTATGCATTAGCGAGTAGTATAATCTAACCCCCGTAGTCCCCTCTCACCTAACCTGACCATTTCTAGAGGAGTTAGGATACTCACAGTCAAGGAGCAGAGTTCCCCTCCTTGGCGCAATCGCTTGAAGAATAAAGAATCGAAGAACTTGCTCAAACCCCTGACGAAATCCACGGTTAGAACCTAAGAGTTTGAACCAAGGAACAACAGGTACATTCTGCAATTTCTTAGGGACCCAAAATTCAGCTAAAAAACATTGGAATAAATATCAAAAATAAAATAGAGGCGGTATTAGGATTTTTCAGTTGAGGCAAAAATATTATGTCAAAAAAATGTTGAGGCAAAAATACAATTTTAAACCTAATAATTAAATCCAACATTGTAAGCCTAACGACGGCGTTTAAAACCGACCTTCTTCTTCCTCAATCCAAGAGGCATTAGGGTTTTTCAGTGAATTACAGGAAGCATCTTCGTGAGTGGTAGTTCTCATTCGAGAATCAAACA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00009.30	GTP_EFTU	12	338	8.80E-54
PF00679.27	EFG_C	885	969	5.40E-18
PF03144.28	GTP_EFTU_D2	440	518	2.20E-09
PF14492.9	EFG_III	536	603	2.80E-06

Gene family

Gene family	Subfamily
--	--

Gene Ontology

GO term	Description	Category
GO:0043022	ribosome binding	Molecular Function
GO:0009536	plastid	Cellular Component
GO:0006414	translational elongation	Biological Process
GO:0005840	ribosome	Cellular Component
GO:0003746	translation elongation factor activity	Molecular Function

InterPro

InterPro term	Description
IPR000795	Translational (tr)-type GTP-binding domain
IPR009000	Translation protein, beta-barrel domain superfamily
IPR004161	Translation elongation factor EFTu-like, domain 2
IPR005225	Small GTP-binding protein domain
IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup
IPR020568	Ribosomal protein S5 domain 2-type fold
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR000640	Elongation factor EFG, domain V-like
IPR035647	EF-G domain III/V-like

trEMBL

trEMBL term	Description
A0A9D4X743	_

SwissProt

SwissProt term	Description
EFL1_HUMAN	Elongation factor-like GTPase 1

KEGG

KO	Description	Enzyme
K14536	ribosome assembly protein 1	[EC: 3.6.5.-]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G22980	Ribosomal protein S5/Elongation factor G/III/V family protein
Medicago sativa L.	MsG0880047016.01.T01	_
Oryza sativa L.	LOC_Os03g44780.1	elongation factor Tu family protein, putative, expressed
Cucumis sativus L.	Csa007434	_
Glycyrrhiza uralensis Fisch.	Glyur003130s00042622.1	_
Codonopsis lanceolata	Cl_chr06_12170T	_
Arachis hypogaea L.	AH01G01180.1	Uncharacterized protein like

Expression pattern