Detail information of Am02G011010.1 Annotation
Gene IDAnnotation
Am02G011010.1 Tetratricopeptide repeat (TPR)-like superfamily protein
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am02G011010.1mRNAChr028571237385715805-

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF13041.9PPR_21612136.40E-181
PF13041.9PPR_22242516.40E-181
PF13041.9PPR_22372866.40E-181
PF13041.9PPR_22723216.40E-181
PF13041.9PPR_23073566.40E-181
PF13041.9PPR_23423916.40E-181
PF13041.9PPR_23824256.40E-181
PF13041.9PPR_24124616.40E-181
PF13041.9PPR_24474966.40E-181
PF13041.9PPR_24835306.40E-181
PF13041.9PPR_25175656.40E-181
PF13041.9PPR_25525996.40E-181
PF13041.9PPR_26416846.40E-181
PF12854.10PPR_12332658.30E-153
PF12854.10PPR_12683008.30E-153
PF12854.10PPR_13033358.30E-153
PF12854.10PPR_13383718.30E-153
PF12854.10PPR_13734058.30E-153
PF12854.10PPR_14094418.30E-153
PF12854.10PPR_14434768.30E-153
PF12854.10PPR_14785108.30E-153
PF12854.10PPR_15145458.30E-153
PF12854.10PPR_16346668.30E-153
PF01535.23PPR2402707.40E-115
PF01535.23PPR2753057.40E-115
PF01535.23PPR3103407.40E-115
PF01535.23PPR3453757.40E-115
PF01535.23PPR3814107.40E-115
PF01535.23PPR4154457.40E-115
PF01535.23PPR4504807.40E-115
PF01535.23PPR4855147.40E-115
PF01535.23PPR5205507.40E-115
PF01535.23PPR6416707.40E-115
PF13812.9PPR_31502111.60E-100
PF13812.9PPR_31902511.60E-100
PF13812.9PPR_32252821.60E-100
PF13812.9PPR_32623191.60E-100
PF13812.9PPR_32963431.60E-100
PF13812.9PPR_33313871.60E-100
PF13812.9PPR_33674211.60E-100
PF13812.9PPR_34004591.60E-100
PF13812.9PPR_34725291.60E-100
PF13812.9PPR_35065621.60E-100
PF17177.7PPR_long1882912.40E-44
PF17177.7PPR_long2924052.40E-44
PF17177.7PPR_long3944912.40E-44
Gene family
Gene familySubfamily
Carbohydrate-Active enzymes FamilyGT1

Gene Ontology
GO termDescriptionCategory
GO:0005739mitochondrionCellular Component
GO:0010019chloroplast-nucleus signaling pathwayBiological Process
GO:0031930mitochondria-nucleus signaling pathwayBiological Process
GO:0004519endonuclease activityMolecular Function
GO:0009507chloroplastCellular Component

InterPro
InterPro termDescription
IPR011990Tetratricopeptide-like helical domain superfamily
IPR002885Pentatricopeptide repeat

trEMBL
trEMBL termDescription
A0A1S3E460 _

SwissProt
SwissProt termDescription
PP407_ARATHPentatricopeptide repeat-containing protein At5g39710

KEGG
KODescriptionEnzyme
K17710pentatricopeptide repeat domain-containing protein 1

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT5G39710 Tetratricopeptide repeat (TPR)-like superfamily protein
Medicago sativa L.MsG0180001253.01.T01 _
Oryza sativa L.LOC_Os06g05920.1Rf1, mitochondrial precursor, putative, expressed
Cucumis sativus L.Csa003172 _
Glycyrrhiza uralensis Fisch.Glyur001741s00036712.1 _
Codonopsis lanceolataCl_chr01_60910T _
Arachis hypogaea L.AH10G31390.4Pentatricopeptide repeat-containing protein At5g39710 like

Expression pattern