Detail information of Am02G010950.1 Annotation
Gene IDAnnotation
Am02G010950.1 Pentatricopeptide repeat (PPR-like) superfamily protein
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am02G010950.1mRNAChr028538133185383612+

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF01535.23PPR4094396.60E-54
PF01535.23PPR4444746.60E-54
PF01535.23PPR5145436.60E-54
PF13041.9PPR_24064393.40E-51
PF13041.9PPR_24414783.40E-51
PF13041.9PPR_24765253.40E-51
PF12854.10PPR_14024352.60E-36
PF12854.10PPR_15095382.60E-36
PF13812.9PPR_34294902.40E-31
PF17177.7PPR_long4585748.50E-23
Gene family
Gene familySubfamily
Carbohydrate-Active enzymes FamilyGT1

Gene Ontology
GO termDescriptionCategory
GO:0003729mRNA bindingMolecular Function
GO:0005739mitochondrionCellular Component
GO:0006396RNA processingBiological Process
GO:0004519endonuclease activityMolecular Function
GO:0016071mRNA metabolic processBiological Process

InterPro
InterPro termDescription
IPR011990Tetratricopeptide-like helical domain superfamily
IPR002885Pentatricopeptide repeat

trEMBL
trEMBL termDescription
A0A9D5A6M7 _

SwissProt
SwissProt termDescription
PP379_ARATHPentatricopeptide repeat-containing protein At5g13770, chloroplastic

KEGG
KODescriptionEnzyme
------

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT5G13770 Pentatricopeptide repeat (PPR-like) superfamily protein
Medicago sativa L.MsG0180001249.01.T01 _
Oryza sativa L.LOC_Os04g49350.1PPR repeat domain containing protein, putative, expressed
Cucumis sativus L.Csa022994 _
Glycyrrhiza uralensis Fisch.Glyur002182s00040255.1 _
Codonopsis lanceolataCl_chr02_25830T _
Arachis hypogaea L.AH10G31120.1Pentatricopeptide repeat-containing protein At5g13770, chloroplastic like

Expression pattern