Gene detail

Detail information of Am02G010330.1 Annotation

Gene ID	Annotation
Am02G010330.1	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am02G010330.1	mRNA	Chr02	76392783	76397218	-

Sequences

CDS:

>Am02G010330.1
ATGTCGTCACCGTCACTTCCTTCGGCCACCATCACCGCCAACTCAATTCCTCCTTACGACCGCGCCAAAGCCGTCAAACAATTCGATGAAACCAAAGCCGGAGTCAAAGGCCTAGTCGACTCTGGCATCCAAACCATTCCCTCTTTCTTCGTTCATCCACCCGAAACCCTATCGGACCTCACTCCCGGATCCGGACCCGAACCAGAAATCCCAACTATTGATCTCTCTGCCGTGCATGAGTCCCGCGCCGACGTCGTTGATCAAATTCGTTTCGCCGCGAGCACGGTTGGATTCTTCCAGGTTATTAACCATGGCGTCTCGTTAGACCTTCTCCACCGCACTATAGCTTCAATGAAGGCGTTTCATGAGCAGCCTGCGGAGGCGAGGGCGCAGGTGTACCGTAGGGAGATGGGGACGGGTGTATCGTATATTTCTAACGTTGACCTCTTCCAATCAAAAGCTGCCAGCTGGCGCGACACACTCCAGGTTAAGTTGGGACCAATTGCAGCAGAAGAGAAAGAGATTCCAGAGGTGTGTAGGATGGAGGTGATGGAGTGGGACAAGGAAGTGGTTCGAGTGGCAGATGTAGTGCTGGGTTTGTTGAGTGAAGGGTTAGGATTGGGTGAGGGAAGGCTCAAGGAAATGGGTATGCTCGATGGGAGGGTGTTGGTTGGGCACTATTACCCGTTTTGCCCTCAGCCTCAACTTACTGTTGGACTCAATTCCCATGCGGATCCAGGGGCGTTGACGGTATTACTGCAGGACCATATTGGTGGCTTACAGGTTAGGACCCAAGAGGGTTGGATTCATGTCAAGCCTCTTGATGGAGCTTTAGTTATCAACATTGGAGATTTACTTCAGATAATTTCTAATGAGGAGTATAAGAGTGCCAATCATCGGGTATTAGCCAATTCTTCTCACGAGCCACGCATTTCAATCGCTGTTTTCCTCAACCCGGGAGAGAGGGAGAAGCCTTTTGGACCTTTGCCAGAGCTAACTTCAGCAGAGAAACCGCCTCTCTATAGAAATTTTACGCTCAATGAATTTCTCACCAGATTCTTCACGAAAGAGCTTGATGGTAAATCATTGACAAATTTCTTCAGGCAGTGA

Protein:

Promoter(3k):

>AM02G010330.1
ATAAGTATAGTAACCTAATCGCGGAGCAAACCAAGTTTGCGATAGGATGTGCCGGTGCTGAGCGACTTTTAGATGCGGCGCCGGCAATGTCTTGTTGCGGCCAACTCCGGCTAGCTTTCGTGTTTCTGGCAAGAAGAAAGGAAGATAGAGACAAATATTATTATAATCTTTTCGTAATATTATTGTTGTATGTAAAGTAATCAATATTATTGATATTAATTTCGACTTTGTTATATGTAAAATCTTGATACACTTTTCTGGAAACTACACATCTCTCTTTGGCAGAGACTTAAAAACTAACACATCCCAACAATATAACACCATGAAAGAAAGATCCAAAATCCAACACAACTTAAATTAAGGTACGAAACCAAAGAACTATCAAAGTTACTAGTAATAAGCAAGCACACTGCTATCTAATAAGTCCCTCTTATAAGTCACGAAATTAAATTGACATTACATTCTCTTCAAGTTTAAGTAGAGTAGGTTAGCAAAATACTAAATAGAGTGGATAAGTTTAAGTACTAGTAGTACTATTTTATTGCTGTAACAGGTTATATATGCTTCTACCTTGAATTAAACTTTCTCCTTTTACTTCTCAAAAAAAAAAGCAACTCAATTATGCATCATCATCAGAATGATTGTTAATTATTTGGTTGAAAGCAACTTTATGCCTAATGTACGTTTAGAATAAAATCAAGAACTAAACTCAAAAGATATCAAACAGCTTTAACTAAGAAGATTGTTCCATCTGAAGCTACAACTGACACAACATTTAGCCATGGCCACAATGGTTTCGAGAGATAAATAAGAGGACATCAAAACAAAACCCCCAAACCCAAAAAAAAAACCAACCCTAAATTGAAGATAAAGAAGATATATATATAAAAACAAAACCCAAAATTGAAGAAGAAGATAGATGCAGTGAAAACCCCCATAACGATGTTTGAACAGTAAAAAAAGTCAATAACGGAATCGAACCAGGAGAGGGACAAACCAGAGAGAGGAAAACCAGGAGAGAGAGAAACGAACCTGAATCTTGAAATCATTTAGAGGGACGACGAGCTTGAAATCGTTGATAGCTTGAAATCGTTAGAGGGTGGAAGCGATTTCTGATTTAGGGTTCATGATTTAGAGGGTGGAAGCGATTTCTGGTTTGGAGAGAGGGTTAGAGCGTGAGAACTGAGTTGTGAGGGAGACGAACTCGTTTTGCGTTGAAATCATTGTGAGGGAGACGAACTCGTTCTGGGTTGAAATCGTTATTGGAGCGTGAGAACCTGACGCGATTTTTTGGTTGTTGAGAGTGTTTTTGTGAGTGTTTCTGTGAGAATTGATCGCTGAGAGTGTTAGGGTGTTTTTGTTTTTTTGGTTTTTGATTTTTTTAATTTAAGTTGATTTTTGGGTTGAAATTTGGGGAATTAGAAGCGCTATTATTTAGCGCCCAATTTTTTTTATTTTTTAATAAATGTTCGTATGGCAACGTTTTTGAAACGTTGGTTTAAGCTTAAACAAAAAACTGTTGCCATAGACCTTATGGGAACAGTTTTCAGCGGTTGCCAATTAAAAAAATGAATCAGCAACGGGTTCAAAAAACCGTTGCCATTGTTGGCTAAGGCAACGGTTTTTTTTTTTTGCGTTTCAATTTTAGGCGTTGCCAGAGGGTCCAAATGTTGTAGTGTGTTAAATAAAAACAGTTTTGAAACTTATGCCATTTGTGAAATAATATGTGTGTATTAATAGCTAGATGAATCATGAGATGACAAGTGTCAATATATTTAATGAGATTATTTTCAGTTGTTTTATATATTGATGTCTACCCACCCAGTAAACGAACCAACTCCAAGACATACATCCATAATAGATTCAAGATTAACATTTCCCCTCTAAACACACATCCATTTCGGGCTAGCCAAATACACCAACAACATGACAACCATATCAAATGTTTGACCTTCTTCGCCTTAGTTCCTTTTCGTAAGTCTCCAAAACAAGTAAAATGATGCACTATGTCATGCGATATAGGTACCTTAGTATCTAACCAACTGTTAATCTCATGCTACACATTTCTCACAACAATGCAATCGAAAAAGAGGCTGCAAATCTTCTCGACGGTCTCTGCAAAATGCGCATACCGTCGAAGGAATAGCTGTCTTCCAAATAGTCTTGAAAACCGAGCTGAGGTTGCTTTCCTCACTGTGTACCAACTGCAATTGAACCAAATGATTATAACACGATCGCACGGTGAAGTTTTTGTTTGATTCCAATATCCAAATCCAATAATCGTCAATACCTGCCTTCAATACAACATCCATAAAAAATGGAGCCAAAGACGTTATTCTCCTCAACCAGCGATGGGTCGTCTAAGTGACTCCAAGGAAGAATCCAACGCCAAACATTATTATCTCCTCAACCAGCGCCAAACATTATTATCCCATCTGCCCAAGTCAGCCACCCTTATGTGATTATCCCCTCAACCAGCAAATAAATTAGGGAAATCATGATATAATGGCTTTTGTCCAATCCAATATTGATGCCAAAAGTCCACTCCTCGACCATCTCCCAAACCCTTTCTAATACACGCCTCAAACCTATTTAAAAGTTCTTAACTTACTGCATAATTAAACCAAAACAAACATTTTTTTGAGAAGAAAACCAAAACAAACTTAAGAGCACCAAAATAGTAGATTTTAGAAAATTGGGGGGACTAGTTAGAATTAGAAATGAAATTTCCGCAAAATAGAATTAGAAATGTAATTAAGCCTAAGATAAAAGTAAAGCAAAAGGTGTTTATCTTAGCTACTAGGTTGTTCTGATTTGACTATTTAGAAAATTCCATTCTAAAATATCAAAATCAATCCACGTTGCCGTTGAGTGTTAAACTTTCGCTCCTCAACTAGATTTTTCTGTCTTCAACTCAAATATAAGTAAACCACCGCCACCATCACCGCAACAACACAAACATTTCCTTCCGCATTATTATTTTCTCATTTCCAATTCCCA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF03171.23	2OG-FeII_Oxy	223	319	4.50E-25
PF14226.9	DIOX_N	70	164	8.30E-18

Gene family

Gene family	Subfamily
Carbohydrate-Active enzymes Family	GT1

Gene Ontology

GO term	Description	Category
GO:0051213	dioxygenase activity	Molecular Function
GO:0046872	metal ion binding	Molecular Function
GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	Molecular Function
GO:0004523	RNA-DNA hybrid ribonuclease activity	Molecular Function
GO:0003676	nucleic acid binding	Molecular Function

InterPro

InterPro term	Description
IPR005123	Oxoglutarate/iron-dependent dioxygenase
IPR026992	Non-haem dioxygenase N-terminal domain
IPR044861	Isopenicillin N synthase-like, Fe(2+) 2OG dioxygenase domain
IPR027443	Isopenicillin N synthase-like superfamily

trEMBL

trEMBL term	Description
A0A9D4W200	_

SwissProt

SwissProt term	Description
ACCH1_ARATH	1-aminocyclopropane-1-carboxylate oxidase homolog 1

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT1G06620	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Medicago sativa L.	MsG0180001152.01.T01	_
Oryza sativa L.	LOC_Os06g14400.1	1-aminocyclopropane-1-carboxylate oxidase homolog 4, putative, expressed
Cucumis sativus L.	Csa010813	_
Glycyrrhiza uralensis Fisch.	Glyur000786s00023857.1	_
Codonopsis lanceolata	Cl_chr04_08130T	_
Arachis hypogaea L.	AH11G05080.1	1-aminocyclopropane-1-carboxylate oxidase homolog 1 like

Expression pattern