Gene detail

Detail information of Am02G009910.1 Annotation

Gene ID	Annotation
Am02G009910.1	Tetratricopeptide repeat (TPR)-like superfamily protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am02G009910.1	mRNA	Chr02	67716963	67736482	-

Sequences

CDS:

Protein:

Promoter(3k):

>AM02G009910.1
TTGTGTTTTTCCCCATTAGGCCATTTTACTCATGTCATATATCAACTGTTTATTTGTTCTTATTGCCTCTTGAACATCAACTTTTTTGTCTGTTTGTTGTTTTTTTGTGAAGCCTTTTTCAATGATGGTTGAGTTAATGTATTTTTCCTTACTTGTTTATATGATATAAACTCTTTTTTGTCTTCATTCATGCTTCACGCTCTTCTTGAATTCCTCTTATTGGACTTGCGGGTGGTGAGCATGCAGTACATAGGGATAACTTCTAGTTTTGCTACTACCATTGAGTTTTTGATGGCAATGTATGGCTATCTCCTTAGTTTTAGTATGAAAACCATGATTGAAGTAGTACTCATTCTCTCAATAATAAAACTGTAGTACAAGAAATTCTTCTGTCAACACCTGCTAACTTTCTAGAGTTTATAATGGATGGAGCCCTTCAATTGTCAATCTGTGAGAGGATATGTTTATGGATTATGAAAAATAGCATTGCCTTTGTGGTTGGGCTGGCTATTTTACGAAATAAGAATTTGTAAAAAGAGTACAAGCATATATATAGGGCGCGCTGGCTTCTTGTAGGCGGTACCCAAGAAAGAAAAATAGTAGGCACTGGGTGTCTTATAATGTAATGTATCCAACCATTCAATTATGATGTATCTAGTTTCACATTTTTTTATATTAGTTGTTTCACACTTTCACTGTTGATATTATTGGAATTTAGGTCGAGAAAGAGAAAGAGAGAACAAATTTTGAATAATAGAATATAACAATGATAAAAGGCATATTATATAGATTATCTTATGTTATAAAATACAATGCTAACTCCTATTTGTTTCAATACTAGACTTGTAATCCTCTTAAAAACGGAAACACATAGTGCAATTTGGAAGCTACTTCCAAGATATATATTCAAGAAATTTATAAGATACAATAAAGATAACATTAGATATTTTGCAAATGTTGTAACACTGATCACCTTAAGTCTTTAGCTTGTTACAAACGTATGCGACATTGATGCAAAAGTATTTCATGATATATCTACTCTACGTTCTGTTGTAAATATGATAGAACCCAAATTAAAGGTATTTTAGAAATTGTACTATTGATTGAAAAGTAGATATCTTACAGAAGGAAGCACTCGGTAACCTCAGAGCAGAAGCTCCTTAGAGAAGAGACATTTCTCTCTCTACCAAACCTCTAAGGTCCTAACAGAAAAATTACTGAATGATCCTTGCTCTCCACCTCCTTCTACCTATAATCCCTTGCAGATTCTAACCAATTGCATGCCATGTAGGTCTTCTCTAGCTTCCCCATTGAGGTAGTCCGTCAATTGATTAAAAATATAAGTTAGTGAAAGATTCAACTGATATGGAAGGGAAAACTTTATTGAATTCAGAATCAGTGATACAATGCAATCCCTGATTTAGAGTTCCAGAGAACTATGATGTATCTCCTATTTTCTGTTTGGCTATCCACTGATCTAACTAACTGCGTAACAGCCTATTTATGTACATTCTGTTACACTTCTATTACAATAATACCCCTGAGTATCCCTCCTAGGGCCTGTCAAGGCTCTTATTTCTCCTCTGGTAGACCCTCTTAATAGCTGGCGTGCTATCAGTTAGATGGTGGATTGATAACTTCTGAGTGCATTCCTTCCACCAACCAGCGGAGTACATTCCTTCTGGGCACAGACCGGTAGATGTATTAACTGAAAGGCTATCAAAGGAGCTGTTCCTACACTGTAAGTGCAAATTAGGAATGATTGACATCCATTCACCAGTTTGAAGGGGAGTCTTTTAAATATGTGGCAAAATATTTTTCAGCCTAAGTTTACGATCGAATATTGCAGTTTTATTGGACTTCTGATCTGTAATTATTGGGATGGAATGTTTCCCTCCTGTAATTATTGAAAATTGTACATGCATAACATGAATAGTATTTATTCTTCAACATATTTCAGGTCTTTCATTACTTCAGCAGTACATCACTCTATCACATCCATTTCATATCGTATTAATTTTTTCTTTTCTTTCTGATTTATCTCATAATGTGTCTTAATTAGGATGGAGATTGGACACAAGACCCTCACAGTTCCGGTAGGCAAATCTATCCTCTTTAATTTATTTGAATTTGAATGATTATAATTAACTATTTATGTAGAGACTGGTTTTAATATTTAGTATCTCATGGTTATCATGGTTATCAATGAGAGACCGATTCTTGCTGGACAAGTTTATTTGGATGGTGACGTTTTTTGGGGTCAAAATTACAGTTTTGTGATATACACTGAAAAGCAACTTCTTAGTATGTTTACATTATTTATGATTTATGTCATTGTGAATGGATACAAGATAAAGCATTAAGTTTTTCTTGTTAATTATATATAATAATGTCGTTAGTCCAGAAGAGTCTGTTTAGGTTGTTATTTTGTTTCATTCCCCAAAAAATGTCTGCATATCCCCTTTGATGTTGTCATTCAGATTTGATGAAAGACCTAACCAGACAGAGTGACTTCATTTCTTTTCTATTCTTTTTTGAAACCTTGGTACAGTTTTGCCCTTAGGGTATATGTTTAAAAATAAAAAATGGGAACTTAGAATTTTTATTTATGAAAATCCGAAAAGCATTAAATACTTTCTTATTTCAATAATTGGAATTAGAATGAGTATTAATTTTGATTTTGATTTCTTAACATGTGTCATAAGGACACACTTTAACAAACAAATTCTTTATTTTTGGATAAAAGAAGAAATTCATCAAGGCAAAGGAAAGATGAATAAAAAGTGTTAGATGCATGAGATCCTCCTCTAAAAAAATTGAATAAGGGAATGACTTCAGAATATTGCACATGGAATTTCCCCTTAAATTTTTGGGCACAGTAGTTGACTTCCGTTTTTGATCTAGACCAAATGGAGTATTGGGTTTAATTTTCTCAATATTGAACTTTTTTTTTTGTATTTCTTATTTTCTTAGAAGGTGATTTGACAGCAGTCTCTAAAG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00515.31	TPR_1	92	125	1.20E-20
PF13414.9	TPR_11	101	140	4.30E-12
PF13431.9	TPR_17	115	146	2.00E-09

Gene family

Gene family	Subfamily
--	--

Gene Ontology

GO term	Description	Category
GO:0006620	post-translational protein targeting to endoplasmic reticulum membrane	Biological Process
GO:0060090	molecular adaptor activity	Molecular Function
GO:0017018	myosin phosphatase activity	Molecular Function
GO:0016020	membrane	Cellular Component
GO:0016740	transferase activity	Molecular Function

InterPro

InterPro term	Description
IPR011990	Tetratricopeptide-like helical domain superfamily
IPR001440	Tetratricopeptide repeat 1
IPR019734	Tetratricopeptide repeat
IPR047150	SGT family

trEMBL

trEMBL term	Description
A0A8B8JJV0	_

SwissProt

SwissProt term	Description
SGTA_HUMAN	Small glutamine-rich tetratricopeptide repeat-containing protein alpha

KEGG

KO	Description	Enzyme
K16365	small glutamine-rich tetratricopeptide repeat-containing protein alpha

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT4G08320	Tetratricopeptide repeat (TPR)-like superfamily protein
Medicago sativa L.	MsG0180001086.01.T01	_
Oryza sativa L.	LOC_Os04g59394.1	expressed protein
Cucumis sativus L.	Csa011087	_
Glycyrrhiza uralensis Fisch.	Glyur000245s00014698.2	_
Codonopsis lanceolata	Cl_chr02_53960T	_
Arachis hypogaea L.	AH07G19130.1	Small glutamine-rich tetratricopeptide repeat-containing protein alpha like

Expression pattern