Gene detail

Detail information of Am02G009190.1 Annotation

Gene ID	Annotation
Am02G009190.1	plant glycogenin-like starch initiation protein 2

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am02G009190.1	mRNA	Chr02	59368089	59373288	+

Sequences

CDS:

>Am02G009190.1
ATGAGGGGACTCTCCCCGAGCACCGTTGAGCCACGTCATCGGTCGTCTGCTTCATTCAGTGAAGATACTAACAAGAGGAAGTCACAAAGAAATAAGGATTTTAAAGATGTTGAGAAAGCATTACATGTTCCAATCCAAGATAAGAGTTTAAATTGCAAGCCACATTGGAAATTTGTTTCGGTAATCATTATATTGGGAACCTTAGTTACAATTTTCCATCCTCCAGCTGTTTATAATACTGATCACATATCAGACTCTATATCACGGCCAACATTTATAAACAACCGCAAAGGAGAGCTTGGCGTCAGTGATCCCCGATATGTATCATTTCTAAATACTGATTGGGGACAAATAGCTAAAGTCCTTGAAAATTTGAAGGATAAGAACACATACCAGGGTGTTGGCTTATTAAATTTCAATGACAGTGAGATTGACCACTGGAAGCAGCTGGTACCAGAATCAGAACATGTAGTCCTTCACCTGAACTATGCTTCTACTAACATCACTTGGGAAGTCTTGTATCCAGAATGGATAGATGAAGAAGAAGAATATGAGTTTCCTACTTGTCCAACACTACCTAGGATTCTGGTACCAGGAAAACCACGGCTTGATCTTATTGTTGCCAAGATTCCCTGCGACAAGTCAGGGCGCTGGTCAAGAGATGTAGCTCGTTTGCACCTACAGATTGAAGCAGCAAGACTTGCTGCCTCTTCTAAAGGATATCATCCAGTGCGTGTACTTTTGGTTACTGATTGCTTCCCAATCCCAAATCTATTTACTTGCAAGGACCTTATACAACGTGAAGGCAGTGTCTGGCTTTATGAACCCAACCTGCATAAACTCAGAGAGAAGCTGCAGTTACCAATTGGTTCATGTGAACTAGCAGTTCCTTTGAAGGCTAAAGAAAACTTTTACTCCGAGAGAGCACACCGAGAAGCTTATGCAACAATCCTGCATTCTGCAAATATATATGTTTGCGGAGCGATTACTGCAGCACAGAGTATTCGCATGGCTGGTTCAACACGGGATCTTGTGATTCTTGTTGATGAAACAATCAGTGAATATCATCGGGGAGGCTTGGAAGCTGCGGGATGGAAGGTCCATACAATTCAAAGAATCCGGAATCCAAAAGCAGAACCAGAGGCATATAACGAGTGGAACTACAGCAAATTCCGTCTCTGGCAGTTAACAGATTATGACAAAATCATTTTTATTGATGCCGACCTTCTTATTCTTAGAAATATCGATTTCCTTTTTGAGATGCCTGAAATATCAGCCATAGGAAACAATGCCACACTGTTCAACTCAGGTGTAATGGTGGTTGAACCATCAAATTGTACGTTTCAACTGCTTATGGATCACATTAATGAGATTGTCTCCTACAATGGTGGGGACCAGGGGTATCTAAATGAAATTTTCACATGGTGGCATCGAATTCCAAAGCAAATGAACTTCTTGAAGCACTTCTGGGAAGGTGATGAGGAAGAGAAAAAGGCGATGAAAACTCGTCTCTTTGGAGCTGATCCACCAATCCTTTATGTCATCCACTATCTGGGTACTAAACCATGGTTGTGTTTCCGCGATTATGACTGCAACTGGAACGTAGACATTCTGCAGGAGTTTGCGAGCAATGTAGCACATGCAAGGTGGTGGAAGGTCCATGATGCCATGCCAGAAAATTTGCAGAAGTTCTGTTTGCTTAGGTCAAAGCAGAAGGCTGCATTAGAGTGGGATCGTAGACAAGCAGAGAAAGGAAACTACAGTGATGGTCACTGGAAAATTAAGATAAAAGACCCTCGTTTGAAAACGTGCTTTGAGGATTTCTGCTTCTGGGAGAGCATGTTATGGCATTGGGGTGATAAGAATTGGACAGATAACTCTACTGTTAACAATTTGCCACCTGCTGTCAGAAGCAAATCTGTATCATCTTTATGA

Protein:

Promoter(3k):

>AM02G009190.1
TCCACTATTTTCCAAATAGTTACAACTTTACAACCAGCCTAGGCTTAAAGTTCTCTTGGTAGTTTTCTCAACACAGCTTTACCTACTGTTCTCACACCTAATACGATCCTTCTAATATAAAAGGTAGCTTCTAACACAGAAGCAAGCTCACTTCTCAAGCCCTACAGCACCAGATGCTACTTGAGAAGGTTTCTAACAGGCTTATCTTTAACCATAGCAACACTATGCTATTTGAGAAGGCTTCTAACAGGTTTTACACTTTCTGGTTTGGGGGTGTTGTGGGATTTCTAGAGCTTGGTTGATACAAATGGTGTTTCAACAGAAACTAAACACAAGCTACAATACATACTCAGAAATAAAAAGGAATCCCTACTATTTTGGAGTAGCTGAGTATGGATGAGAGAAAGCTTGACATTTGAAAAGATTGGAGGATTTTAGCTCAAAGTACTCTCACATCGTTCATCAATGATCCGATGCATTTATTTATAGCTAAAGATGTGTGTAATAACCTCTGGTCCATGAGAAATAGTCGTTGCCAAAATTTTATAGCCGTTTACAACCGTTGGAGTGCTTTTGGCTTGAATACAGCTGTGTTTCTGCACTTCTGCAGAAGACATCACTTATACAGCTGTCATTACTCTTCTCAGCTTTGGCTCTTCTCTTCTTTGAGTCTTCTGAAGATGATACTTCCCAAGTTGATACTTCTTAAGTTGATGCTTCTCATGTTGATGCTTCTCATATTAATACTTCTCAACATGACTCTTCTCAGCTTGACTGTTCTCATCATGATCCTTCTGATCTTGACTCTTCTCATCATGATGCTTCTCAACTTGACTCTTCTCGTTGTGATTCTTCTCATCTTGACTCTTCTAATGACTCTTCTCATGATGACTTTTCTCATCATGACTCTTCTGAGGTTGACTCTTCTTATGATTCTTCTCATGTTGACTTTACTCATGATGACTCTTCTCATGATGGTCTTTCTCAAGTTAACCCATTTGGTATTGAATTTTGATCATGTCAAGAGAGGTCTTCTTCTATGTTTGCTTCTAGTCAACACTTCTTGTTACTGCTTCAAGTCTTCTCAACATATATGCTTCTCATAAGCAGATATCTTCTTGAGAATAAGATTACAGATCCTGTTCTTATATTTCACTCAAGAAGAAGCATTAGTAACATAAGAAATCAGATAACTTAAGCTTCTCACATTTGAAGTTTGTTAATCATCAAAACTAAACTGGGATTTTTCCTCAATAGGGTAATCAGATCTTTCTAGTGAATGGTCCATCTCAGGACAAGACAAAACGATAGTGAGGCGACTCGTCCCCAAGATCGATGTCTGGGCGGTCGCGTTGGTCAGGGGATCTCCCGGACCTGGATTGCTGACGACATCATCTTGGGGACTTAGCCCAGCTTCGTGACCTATGGCGCGAGTTAGATGATCCGAGTGACGAACTCCTGCTTGGAGACTCTTCAGGCCAGTAGGTGTCATCGTGCGACGTCGCAGAGGGGATCGATGATTGAGTTGTCGCGATGATTGAGTCCCCTCACGCGGACAATTCAGCTCGGGCATTGTATTTTCTCTCACAGATGCCACTTCCCTCTCTATTTGGGTGAGGCGCTCTTCTTGCTGCACCATAGCCAGGGCGCGACTGTTCAGGAGCTCCAGGAGATGACGAACCATCTTAGTAAGGACCGGGACGTCGCCTTGGAGGGCTGGGGCCGGGCGGAGCAAGGACTTGCACATCGTCATTGGGGAGAGTTGCAGAAACACCCTCAGGCGTGTCAAGGGGTCGGGGTTGAGCCACGATAATGCTTCGGACTCAGGGTCTACCTCTAGGTGTCATTGGATACAAGAGCGAATTGAGAGGAGAAAAGATAAGGTGAAACAAAGATATCTTCCACTGTAGTCGCCAATGTGCCGTACATTGCCTTACCACGGGTTGGTCCGAGTTAGCATTTGGTAGGGCTCCTACTCGACCAAGATCTTGACGTCTACCCCGGGTGAGTATATGAGAATTTCATAATGAAGCAGGGAATGAATAATATACCTTTTTTCTGCAAGGTTGACCCATATTTATAGACATCAGGCCTGTCCTGGTCCGTTGGATCGTCTATGTGCATCTCCGTCGTCGATGCCTGAAGGGCATGGATTGCAGATAGGGATTTGCCTGTGATGCTGAGCTGCTTTGGAGCTTGACTTAAGTAAGTGGGTTGATCCAGGGCCCAAAGTCGGACCTCATGCCCTGTTTTATAATTATTTTTTATATTTTTTATTCATAAATAATATTTTATTTTTTTTATGAATCATAATAATTATTATTTTTCCTTTAAGTATATGTTTTTTTTGAGCTTAATGATAAAATTAATTTAGAATATAATAATTTATTTTTATATGTTCGGATTAATTAAATTTTGTACGATTCAAATCATATAAAGAAGTCGATGGTCCTGCTACCGCTAGTCAACTTATATAGACTAAGTACTCGGCGGAAGTGAGGTCGGGTAACAACTTAACAATTTTTATGGGTTTACAATGATTCGGCAGTGTCTTACTCATTTACAATTCAAACTGAACCCCACCCAGTATAGACTAGATTATATCAATATGGTAAAATAAAAAATACTTGAGACATGTTAAAGGAAAAAAGAAATTACACCTAATCAGACGCATTAAGAAAAAGAGTCAAAGGACCGTGAGGTGAGGCTGATTCAATTCAAACTTCAAACGTCAACGTGAATCAACCGCTACTTGTGGTGGCTTCTTTCACCACTCTCAACCGTCTTTCTTTCTTGATCCACCTCGCTCTTCAACTCCATCGGATTCATTTTTCATCTTCACATTTCTTAGCTCTCTTCAGAAATTCCTTGAATTTTTCTCTCTCCCTCACTCTTCCACACCGTAAGTCTCCTTGCATTCGCATCAAAACCTCCTCCGCTTTTTTTGTGTATATTTGACTCCGCAATCAGACGCTTGCGTGAGTTTGAGTTGAATCGGAG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF01501.23	Glyco_transf_8	319	524	1.60E-14

Gene family

Gene family	Subfamily
Carbohydrate-Active enzymes Family	GT8

Gene Ontology

GO term	Description	Category
GO:0005794	Golgi apparatus	Cellular Component
GO:0045300	stearoyl-[ACP] desaturase activity	Molecular Function
GO:0009570	chloroplast stroma	Cellular Component
GO:0009834	plant-type secondary cell wall biogenesis	Biological Process
GO:0006633	fatty acid biosynthetic process	Biological Process

InterPro

InterPro term	Description
IPR029044	Nucleotide-diphospho-sugar transferases
IPR002495	Glycosyl transferase, family 8

trEMBL

trEMBL term	Description
A0A396JHX9	_

SwissProt

SwissProt term	Description
GUX3_ARATH	Putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3

KEGG

KO	Description	Enzyme
K20890	xylan alpha-glucuronosyltransferase	[EC: 2.4.1.-]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT1G77130	plant glycogenin-like starch initiation protein 2
Medicago sativa L.	MsG0180001036.01.T01	_
Oryza sativa L.	LOC_Os01g65780.2	glycosyl transferase, putative, expressed
Cucumis sativus L.	Csa019139	_
Glycyrrhiza uralensis Fisch.	Glyur000199s00018205.1	_
Codonopsis lanceolata	Cl_chr02_58630T	_
Arachis hypogaea L.	AH06G27150.2	Putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3 like

Expression pattern