Gene detail

Detail information of Am02G008790.1 Annotation

Gene ID	Annotation
Am02G008790.1	FTSH protease 11

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am02G008790.1	mRNA	Chr02	53076052	53094945	-

Sequences

CDS:

>Am02G008790.1
ATGGCTACTATTCAAGCTTCTCTTCTCTCCAAACCTCCCCTCCCATTCCTCACTCCAAACCACTCTTCCTTCTCCCTTCACCATCTCTCCTTCAATCCCACGCGCCTTCGTCCGCGTGTTCCTTCCACACCTCTCCTCTGCACATTTCGCCCCGACACCGTTAGTTCCCCCTCCGAACCCGGTTCAATTGAACCGGACTTCGATTCCGTTGACCCGGAAGCTATAAATTCCACGGACAACGACGGTGCCGTTACGGTTTCGGATTCTAACGAATCGAGATTTGAAGCTGTAGGTGTTGAGAGTTCTGAGACTGTGGCGCAAGGTGGCGTTGATTCTGAGGGAGAAAAGAAGGGTCCGGATTTGGTTGTTGGAGATGGTAGGCTACCGATTGTTGTGTTTTTGGTTGGACTTTGGGCGAGGGCGAAAGAAGGTTTCGAGAGGGCATTTTCGGAATTGTTTGGATGGTGGCCGTTTTGGCGGCAGGAGAAGCGGTTGGCACGGTTGATGGCGGAGGCTGATGGGAATCTTCAGGATGCTGCTAAACAGAGTGCACTGTTTGTTGAGCTTAATAAGCACAGTCCCGAGTCTGTCATTAAGAAATTTGAAGAAAGGGATCGAGCTGTGGACAGTAGAGGTGTTGCAGAGTATCTTCGAGCGCTTGTCGTCACCAATGCTATTGCAGAATATCTTCCAAATGAGGAAACTGGAAAACCTTCTAGCCTTCCCACCTTGCTACAAGAGTTGAAACAGCGTGCATCAGGTAACTCAGATGAGAATTTTCTTAACCCTGGAATATCTGAGAAGCAGCCATTGCATGTGGTTATGGTTGATCCAAAAGTATCAAACAAATCACGATTTGCTCAAGAGCTTATCTCAACTATTTTGTTTACTATAGCTGTTGGATTGGTCTGGTTTATGGGTGCTGCTGCACTTCAAAAATACATTGGAAGCTTGGGTGGGATTGGAGCTTCAGGTGTTGGTTCAAGTTCTTCCTATACCCCAAAGGAGCTAAATAAGGAAATAATGCCAGAAAAGAATGTAAAAACATTTAAGGATGTGAAAGGTTGTGATGATGCAAAGCAAGAACTTGAGGAAGTTGTGGAGTACCTAAAAAACCCAGCCAAATTTACACGCCTTGGAGGAAAATTGCCAAAGGGTATTCTTTTGACAGGGGCACCTGGGACTGGAAAAACTTTGCTAGCTAAGGCTATTGCTGGAGAAGCTGGTGTTCCATTTTTCTATCGTGCAGGGTCAGAATTTGAGGAGATGTTTGTTGGAGTTGGTGCTCGACGTGTAAGATCCTTATTTCAAGCAGCCAAAAAGAAGGCTCCTTGCATAATTTTCATTGATGAAATTGATGCTGTCGGATCAACAAGGAAACAGTGGGAGGGCCATACCAAGAAGACATTGCATCAACTACTTGTTGAAATGGATGGGTTTGAGCAGAATGAGGGAATAATATTAATGGCTGCAACAAACTTGCCGGATATTCTTGATCCAGCTTTAACAAGGCCTGGTAGATTTGATCGACACATCGTTGTACCAAATCCGGATGTACGTGGTCGACAAGAAATATTGGAACTCTACCTGCAAGATAAACCTGTAGGTGATGATGTAGATATTAAAGCAATAGCTCGTGGTACCCCAGGATTCAATGGGGCAGATCTTGCAAACCTGGTGAACATTGCTGCCATTAAAGCTGCGGTTGAAGGTGCAGATAAATTAAAAGGTGCACAGTTGGAGTTTGCAAAAGACAGAATAATTATGGGTACAGAGCGGAAAACAATGTTTATATCAGAAGAATCAAAAAAGCTTACTGCTTATCATGAGAGTGGCCATGCAATTGTTGCCCTTAACACTGAGGGTGCACATCCAATTCACAAGGCAACAATCATGCCACGTGGATCTGCTTTAGGAATGGTCACTCAGCTCCCCTCAAGTGATGAGACATCAATAAGCAAGAAACAGTTGTTAGCTCGCCTTGATGTTTGTATGGGAGGAAGAGTTGCAGAAGAGCTTATCTTTGGTCGGGATTCTGTCACCACTGGAGCAAGTAGCGATCTTTCCACCGCTACCGAGCTTGCCCAATACATGGTTTCAAGTTGTGGGATGAGTGATGCAATTGGGCCAGTTCACATCAAGGATAGACCAAGTTCTGAAATGCAGTCCCGTATTGATGCAGAGGTCGTTAGACTCCTTAGAGAAGCATATGATCGTGTGAAAGCTCTTCTGAAAAAGCATGAGAAGGCATTACATGCTCTGGCAAATGCGTTATTAGAATATGAGACACTTAATGCAGAAGAAATCAGGCGACTACTTCTCCCATATCGGGAAGGAAGACTGCCAGAACAGCAGGAACAGGAAGAAGCAGAAGAGGATCTTGTACTGGTCTAA

Protein:

Promoter(3k):

>AM02G008790.1
TAGAGCTAAAAAGGACAGATATGTTTCTTAGGCCTAGATTAGTATCCTTCATGGTAAGGACTTTATCTAGAAGGAAGCTAGATGGATCATGAGTGACATATGTGATATTTATATTTCAAGGGATAACTTGTTGGCATCACGAAAGAAAGTTGTGGTGAGGGACTTTGCGAACATTCTTATTGGTTGAATTTCAAATGAGTTATACTAAATTATGTGGATCCCATGTAAATCTAGTATGATAATTTCAACAATTATAAGAGAGTGTGTTCAAAAGTGTATTCTTGTAACAAAGATTTCGGGTGAGGGGATAATGCCCCACTCCAAAGCAGGGAAAACATTTTGACTCAAAGGGATTAGTGGAGATTTGAATCCGAGACCTCCTTACAAATCTTATCATGCTCCACTAGGCCCCTTGAGATTTCTCAAAAGAGTGTGAGAGAGAGTATAACACCACCATTTCTCTATCCTATTAATATACTTATTGTTTCGGACTGGGCTGAGGGCCCAATCCCTACTTTGGGCCGAGAGGTGGTGATGACTCTATTTTATATAGAGTCATTTATGTTTCTATAACTTAAATTATTACTTGAATCTCAAGAATATTGTCTTGTAAATAACCAAATGTGTAAGAAAACGTAAAACAAAGCAAAGGACCCCGTTGGTGGTAGTTTGGTAATCAAATCAATCAAATTGAAGCAAGCGGAAACAAGTTCAAAGAACCTACTTTTTCAAGTGCAAAGAACCTCCCCCTTGAAGACTATAAATACCACTCACTCCCTCATTCACAAGCAGACCAGAAATTATCACTTAAAACATCATTGGCACTGGTTTCAAAGGAAATGGAAGGAATTGACAACCTACAAGGAGTGCTGAAGGCAATGCTGCAGCATTACTGAGCTGACTGATGCATGGGCAATTAATTGTGTACTCTCTACTCTATATATTGTATTTTGTATTTGTTAGTTATATGAACATGTTTATGATTTCAGTAATGTCAAGCATGAACTAAATTCCATTTGTAGTTGGGATGCTATACACTTTGTAATTATCCTTTAATTAGTTTTGTGTTATATATTGATGTTGGCATTTTAGTTCTTGCATGCTTAATTCTTTCACATTCATTCCTTAGAATTGATCATCTAAAAGTGAGTGCAAATTATAAATTCAGACATGGTTTATAATTGGAACTCAAGACTAATGTGGGTAAGTGTTTTAACAAAGGAAACTTTGTAATTCCATGCTAAACCTAGACACAGGCAGCATAGTCCATAGGGTGATATCGTGAGTGCTTCATATACAGGAGTGAACCTATTTAAGGGCACAGACATGTTGTCCCTTGTAATGAAACTCTGACGATAGTGACCAAAAGTCACGCATCAAATGCTACATCATCCAATGCTCCAGCATCGTATGCAACACAATGTTGTTAAAAGTGAGTTACTAGTGAAAATGCATTCCAACTACTCTTTCATCATATATCTCAACCCAACTCAATTTGATCATTTACTTTCTGTCTTTTATATTCTTGCGTTCCTCATTTGTGTGATATTTTGTTACTCCTCACCATGGTTGTCAAAATCGCGAGTCAACTCGTACGATTCTACGAGTTTACGAGTTTATGATGCCCCAACGAGTCGATCAAATTTCGTGTAGAATCGGAATCTTCATAAACTCGGTCAGACTCACGAGTTTATCACAGAATTGAATTTTTTTTTAAAAAAAGCCCAAAACGCTGGGTTTTGGGTTAACTTGTAGAGGAAGCTCATTATGTCTAAGATGTGTACAAGTGCTATTCCTTTCAATTGTATTAAAAATGTAGAGTTTGCAAAGATGTTTGACATGATTGGGAGGTATGGAATCGGTTACAAACCTCATTCATATCATGAAATTAGAGAAAAGCTTTTAAAGAAACTTGGAGTTTTATCTAATAGGAATTGTTATCTACATACTTTATTATTTTGCTTAGTTATGGTGGTTAGTTGAAGTTGGAATGTTGAAAATTTTGATAAATTTTGCTGTTATTGATGAAATGTCTTCAGTATTATTGATACTGTTTGACACTACAGTAATATTTTTTCATATTTTTTTAGTGTATTTTTTTTTCATAGACTCTTACAAGTCTACGGTCCTCTCACGAGTCTAAGTAGACTCTCGAGTCTGACAACCATGCTCCTCACTAAAGCTATCAATTTAAACTTTGAAATTAATCAAATCCCCGTGGGTACGATCTCAACTTACTACTTTATTACTTGTTACGATTGTGTATACTTGCACATACAATTGTGTATATATATCAAGGCACAACAGGCGGCCCACTAAGCAATAAGCTCTCCTGGAGAAGAAGAGCGTTTTTACCTAGGGAAATGGCCATCCGTGCCTGATCGCTATCAACGGCTGGCATCACCTCGCCAGACCCAACAGTGGAGACAGAACAAGGCAGTTACGCGCAACCAGCCTCCAACGCCTACCCAACTGTATAAATAAGAGTCAACCCCCCACAGACAAGTACACAATCTATCACTCTCATGTCTCGTTTTGACTTCTTCCCCTGACTTGGGCGTTGGAATGTCTTTGCAGATATAACCCCGAATTGTGATCCGACTTCAACTCTGCACCACGACTTCAACTAGACAAGGCTATCAACTATCTAGACCGGTCACTCCAGCACGAATAAGATATAGATCATTTATCAATCGGTTTAACGAGTAATTTCTCATTTAAAAAAGAGAGTAATTTCTAACTCTTCATTCACTTCATATTTTTGTGACGATCTCCAAGACAAACATTTTCAACAGGGGCCTAAGTTCACAAAATCTAAAGGCAGCGCCAATTTGAGTCCTGGATAAGGTACTAATTACTTACATTACGTGCATCTTCTTCTTCCTTACACCCCCAACACTCTTCCTCTACCTCCTCGACGAGAGAGGGAGAAGAAACCCACACACAGCCACGGATACTAAATTATAAACCCTAATAATCTTAACAACCAAATCCTATCCA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF01434.21	Peptidase_M41	597	772	1.20E-61
PF00004.32	AAA	387	515	1.30E-40
PF17862.4	AAA_lid_3	538	572	1.90E-08

Gene family

Gene family	Subfamily
--	--

Gene Ontology

GO term	Description	Category
GO:0016887	ATP hydrolysis activity	Molecular Function
GO:0051301	cell division	Biological Process
GO:0005524	ATP binding	Molecular Function
GO:0016020	membrane	Cellular Component
GO:0003723	RNA binding	Molecular Function

InterPro

InterPro term	Description
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR005936	Peptidase, FtsH
IPR037219	Peptidase M41-like
IPR000642	Peptidase M41
IPR003959	ATPase, AAA-type, core
IPR003960	ATPase, AAA-type, conserved site
IPR003593	AAA+ ATPase domain
IPR041569	AAA ATPase, AAA+ lid domain

trEMBL

trEMBL term	Description
A0A1S2Y3V2	_

SwissProt

SwissProt term	Description
FTSHB_ARATH	ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial

KEGG

KO	Description	Enzyme
K08955	ATP-dependent metalloprotease	[EC: 3.4.24.-]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G53170	FTSH protease 11
Medicago sativa L.	MsG0180000989.01.T01	_
Oryza sativa L.	LOC_Os01g43150.1	OsFtsH9 FtsH protease, homologue of AtFtsH11, expressed
Cucumis sativus L.	Csa015459	_
Glycyrrhiza uralensis Fisch.	Glyur000376s00018689.1	_
Codonopsis lanceolata	Cl_chr03_03720T	_
Arachis hypogaea L.	AH06G27520.1	ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial like

Expression pattern