| Gene ID | Annotation |
|---|---|
| Am02G008280.1 | La protein 1 |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am02G008280.1 | mRNA | Chr02 | 44481982 | 44488490 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF05383.20 | La | 14 | 83 | 2.90E-23 |
| PF08777.14 | RRM_3 | 355 | 448 | 3.80E-22 |
| PF00076.25 | RRM_1 | 124 | 177 | 2.80E-15 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0005654 | nucleoplasm | Cellular Component |
| GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | Molecular Function |
| GO:0006396 | RNA processing | Biological Process |
| GO:0003723 | RNA binding | Molecular Function |
| GO:1990904 | ribonucleoprotein complex | Cellular Component |
| InterPro term | Description |
|---|---|
| IPR036388 | Winged helix-like DNA-binding domain superfamily |
| IPR036390 | Winged helix DNA-binding domain superfamily |
| IPR035979 | RNA-binding domain superfamily |
| IPR000504 | RNA recognition motif domain |
| IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| IPR002344 | Lupus La protein |
| IPR006630 | La-type HTH domain |
| IPR014886 | La protein, xRRM domain |
| IPR045180 | La domain containing protein |
| trEMBL term | Description |
|---|---|
| A0A1S2Y423 | _ |
| SwissProt term | Description |
|---|---|
| LA1_ARATH | La protein 1 |
| KO | Description | Enzyme |
|---|---|---|
| K11090 | lupus La protein |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT4G32720 | La protein 1 |
| Medicago sativa L. | MsG0180000882.01.T01 | _ |
| Oryza sativa L. | LOC_Os02g39700.1 | RNA binding protein, putative, expressed |
| Cucumis sativus L. | Csa021078 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000456s00017930.2 | _ |
| Codonopsis lanceolata | Cl_chr02_64380T | _ |
| Arachis hypogaea L. | AH10G21770.1 | La protein 1 like |