Gene detail

Detail information of Am02G007690.1 Annotation

Gene ID	Annotation
Am02G007690.1	ARABIDOPSIS TRITHORAX-RELATED PROTEIN 6

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am02G007690.1	mRNA	Chr02	38790610	38793269	-

Sequences

CDS:

>Am02G007690.1
ATGGCTTCATCAACAAAAACTCTCACTCAAAGAAGAACCCACGCTCCCAAACCAGCTCGCAAAAAATCCCCTTCCTTCAACGACGTCGTTTGCGAAGAATGCAGCTCCGGCAATTCCCCAACGAAGCTTCTTCTATGTGACAAATGCGACAAAGGATTTCATCTCTTTTGCCTTAGACCTATCCTCGCTTCTGTTCCCAAAGGCTCTTGGTTTTGCCCCTCTTGCTCTCACAGCACCTTCAACAAACCTAAGTCTTTTCCTCTTGTTCAGACCAAAATCATTGACTTCTTTCGAATTCAACGATCTCCTGATGCGTCTCAGACTTTGAATCAAGATGTGCGTAAGAAGCGAAAGAGGGGGAGTGTGTTAGTGGTAACGAAAAAGAAAAGGAAACTGCTACCTTTTACTCCGACTGAGGATCCTAAGAGGAGATTGGAGCAGATGGCGTCATTGGCAACTGCACTGACTGCAACTAAAGCGGAGTTCAGCAATGAGCTTACCTATATGCCTGGAATGGCACCAAGGTCTGCTAATCTTCCTGCTTTGGAGCATGGGGGAATGCAGGTCTTATTGAAAGAAGACACTGACACATTAAACCTGTGCAAAAGTATGGTAGAAAGAGGAGAATGGCCACCACTCATGGTTGTTTTTGATCCTGTTGAAGGGTTCACTGTAGAAGCTGATAGGTCCATAAGAGATTTGACAATAATAACAGAATATGTTGGAGATGTGGATTTTTTGAAGAATCGGGAAAATGATGACGGGGATAGCATAATGACACTTCTTTCTGCTTCTGATCCTTCACAAACGCTTGTCATCTGTCCAGATAAACGTAGCAACATAGCACGTTTCATTAATGGCATCAATAACCACACACCGGAAGGAAAAAAGAAGCAGAATTTGAAATGTGTTAGATTTAATGTGGATGGTGAATGTCGGGTTCTTTTAATTGCTAATAGAGATATAACAAAGGGGGAAAGGTTGTACTATGACTACAATGGATTAGAACATGAATATCCAACTGAACATTTTGTTTAA

Protein:

Promoter(3k):

>AM02G007690.1
ACGTCGGCCTCCCGATAATGCACTGGTAGACAGATTTGCAAGGGAGGATTAGGAAAACTGTTTTGACAGTCCTGCATAAAGGTGGTTCACCCTCTGGGTCTCCATAGGTGACCATCAGCTCCAGGTGGCCTCGAGGCCTAGTTCTCGATCCGTTAAATCCGGTCAAATCCTCTCCTTGATATGGAGTCAGGTCGGCAGGGGAGATGCTCAAAACTTGCAGCAGGTCTTCGAAAATGACGTCGACCGAGCTCCCCTGGTCGACTAGGACTCTTCTTACTTCGACATTGGCCATGATGGCAGTAATGAGCAGTGGGACATGTTTGTTTGGTTTTCCGTCCAGCAAATCCCTGTCGTCAAAGGATAAAGGCGGCCTGACTAGTCCTTTCCTATGGGCTGAGGTTGATGCAACACTCAAGATCTCCTTCCACTTCTTTTTCATTGACCTGTTCGACCACTAACCGTCAAGAGGGTTGCTTCCGTGAATCACCATGGCGCCCTCATGGGCGCTTCGTGTCTCCCTAAGGGTGTCCTGCCAGGCGCCCTCATGGGCACTGGCTGCTTCATCACAGGCGCCCTGCCAGGCGCCCTCAAGGGCGCTAGCTGCTTCAACATAGGCGCCCTGCCAGGCGCCCTCCTGGGCGTTGGCTTCTTCATCACAGGCGCCCTGCCAGGCGCCCTCAAGGGCGCTGGTTGCTTCAACATAGGCGCCCTGCCAGGCGCTCTCATGGGCGCTGGTTTCTTCATCGCAGGTGCCCTCATGGGCGCTGGCTGCTCCATCATAGGCGCCCTCATGTGTGATGATTCGAGTCCGGGGTCTGCCTCTGGAAGCCATGGAGCAGCAAGAGAAAAGTTCGAGTAGTGATGATGTGAAAGATAGATATCTCCCACTGTGGTCGCCAATGTTCTGTACCGAGCAGCTTTTTGGTCGTCTGCTGTTGGTATATCTCTTGCTGTCCTGACAGGAGGTCAATGAGCGCCCGACGGGGGGGGGGGGGGGGGGGGTACCTGCAAGCCACGCCGACGCTCAAGTCAGTATATAGAATATAAGAGTGAAGGTACTAAGGATTAGAGATTCAACCTTTTTAAGGGCAAAGTTTGCCTGTATTTATAGGAAATCGTGCTCTCTTGTGGATCGTCGAATGGGTAGAGTCGATCTTGACCGTCCAAGCATGTTGGGCTCGCATGAGGTGGATATGGGCTAAATTGGTTGGGCTGATCCATATGACTTGCTAAGCGCACCTCCTGGTTTTGCTAATGGGACCCTCTAGTTGACTCTAGAACACGCACAGTCATCACAAACCAAACCACTAGAGTTTCCAAATACAAGCAACCAAGAATACCAAAGTACTCGGACCAACCAATATATGTTTGACTAACTTTTTTCACTACTAGAGAAATTTTTTTTGGGTTTTGCTTTTCCCACACCCCCTCCTACTCTTTCACACCCCTTAACAAATTTTATTCCAAAAATAACCTCGCGTGAGACGCTGCGAGGACGTGTTTTATGACTGTTCGAACGACCTTGTTCGAACAGGTTCGCATGACCTCATGCGAACAGTTTAAAAACGCCCAAAAGGGTGTGAAGTCAAAATTTAACACACTCGAACGATTTCGTTCGAATGTGTTCGAACGAGGTCATGCGAACAGGTTCGCATGACCTCATGCGAAGAGGTGAAAAACGCCCAAAAGGGTGTGAAGTCAAAATTTAACACACTCGAACGATGTCATTCGAACCTGTTCGAATGCCCGTGTTCGAACAGGTGAAAATTCGTGAAAAAAAAGAGGTTTGGCCTGGCCTTTTGGTCTTTTCACACCCTTATGGGGTGTGTTTCGAGTAGGAGGGGGTGTGGGAAAAGCAATACCCTTTTTTTTCTTTGGCCGAAACAATACTACACAATACGAGTACGGGCCCAAGTAAAGGCCACATACAAGAGTCAACAAAATACAGGGTGCTATTTACACCCCTATTTTTACTAATACACCATAACACATTAATCATTACCTTTTTCTATCCAAACTAACCATATTCAAAAGCCAATTTTGAAACCTATATTTTATTTTCTAATTATATTATGTTTTGTAACTTAGTAGAAGTTAACATCCGAATCATAAAAAAAAAGAAGTTAACATCAGAATCTGAAATATATATAATCAATTTAAAAGTTTTTTTTGGATAAGCAATAATTCATTGATTAGAGCATTAGGAATGCTCAAAACTACAAATACAAGAAGAATTTAGAAATTGTTAATACAAGTCAAAACATTGTTCCACCAAAGAGGCGAAGACAACCTAGAATCTCTACCCACACCAAAAATAAACCAACACAATGACAAAAACTTAATACGAGCGACAATCGAATCAATCTTGGCCTCTTCCCCCTCTAAAGCAAACTCCATTCCGGGCAAGCCAAAGACACCAATAAATTGTCAACCAGAGTAAGTATTTAACCTTCTTGGATTTCTTCCCCAAACATAACTCGCCAAAATGAATATAGTGTTGATATAAGGTAAGAGACATAGACAACTAGACATCAAGCCATCGCCCTATTTCCCTCCAAATCTTTCTCGAAAGATTAATTTAAAAGTTAATTTGTTCTAGAAAATCTAAATAGTCTATAAGTTAGTAAAATATCAATTTTAATTAATAAATTTACTAAGTTTTTTTTGTGTATAAATTTACTAAGGTGTCACATCTAATTAACTATCAATTAATCTTTATTAACCATGATTTTAATTTAAACGTGATTAAAAATTATTTTTAGGTGTTGAAAATATTCATAATAGAATTACGGTGTAATTTTCATTTTTCCGTTTGTGTTGTGTCTAAGCCGTGTGGCACGATCACCCGAAACGATTAAAAAGAAAATGGCGCGGGAAGCATAATTATGGCGCGAAAATCTCGAAACCCTCTAACCCTCTTTCATCTTCAATCCCATATATAAACAACACAGTAAACACAAACCCAAACACACACAAATCCATTTCCGTATCCAATCTCCA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00628.32	PHD	31	77	3.00E-11

Gene family

Gene family	Subfamily
Transcription Factors Family	PHD
Ubiquitin Family	PHD
Epigenetic Regulators	SDG34

Gene Ontology

GO term	Description	Category
GO:0000785	chromatin	Cellular Component
GO:0032259	methylation	Biological Process
GO:0003682	chromatin binding	Molecular Function
GO:0003712	transcription coregulator activity	Molecular Function
GO:0008168	methyltransferase activity	Molecular Function

InterPro

InterPro term	Description
IPR013083	Zinc finger, RING/FYVE/PHD-type
IPR019786	Zinc finger, PHD-type, conserved site
IPR001965	Zinc finger, PHD-type
IPR019787	Zinc finger, PHD-finger
IPR011011	Zinc finger, FYVE/PHD-type
IPR046341	SET domain superfamily
IPR001214	SET domain

trEMBL

trEMBL term	Description
A0A1S2Y4Q0	_

SwissProt

SwissProt term	Description
ATXR6_ARATH	Histone-lysine N-methyltransferase ATXR6

KEGG

KO	Description	Enzyme
K24406	[histone H3]-lysine27 N-methyltransferase	[EC: 2.1.1.369]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G24330	ARABIDOPSIS TRITHORAX-RELATED PROTEIN 6
Medicago sativa L.	MsG0080048753.01.T01	_
Oryza sativa L.	LOC_Os02g03030.1	ATXR, putative, expressed
Cucumis sativus L.	Csa015475	_
Glycyrrhiza uralensis Fisch.	Glyur000696s00018524.1	_
Codonopsis lanceolata	Cl_chr03_52370T	_
Arachis hypogaea L.	AH06G27620.1	Histone-lysine N-methyltransferase ATXR6 like

Expression pattern