Detail information of Am02G007540.1 Annotation
Gene IDAnnotation
Am02G007540.1 Protein with RING/U-box and TRAF-like domains
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am02G007540.1mRNAChr023770135937710270-

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF03145.19Sina1103092.80E-80
Gene family
Gene familySubfamily
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Gene Ontology
GO termDescriptionCategory
GO:0061630ubiquitin protein ligase activityMolecular Function
GO:0005737cytoplasmCellular Component
GO:0016567protein ubiquitinationBiological Process
GO:0008270zinc ion bindingMolecular Function
GO:0016874ligase activityMolecular Function

InterPro
InterPro termDescription
IPR013010Zinc finger, SIAH-type
IPR001841Zinc finger, RING-type
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR008974TRAF-like
IPR018121Seven-in-absentia protein, TRAF-like domain

trEMBL
trEMBL termDescription
A0AAE1JXU8 _

SwissProt
SwissProt termDescription
SINA4_ARATHE3 ubiquitin-protein ligase SINAT4

KEGG
KODescriptionEnzyme
K04506E3 ubiquitin-protein ligase SIAH1[EC: 2.3.2.27]

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT4G27880 Protein with RING/U-box and TRAF-like domains
Medicago sativa L.MsG0180000806.01.T01 _
Oryza sativa L.LOC_Os02g19140.1seven in absentia protein family domain containing protein, expressed
Cucumis sativus L.Csa015811 _
Glycyrrhiza uralensis Fisch.Glyur000164s00014485.1 _
Codonopsis lanceolataCl_chr03_52640T _
Arachis hypogaea L.AH17G27780.1E3 ubiquitin-protein ligase SINAT3 like

Expression pattern