Gene detail

Detail information of Am02G005630.1 Annotation

Gene ID	Annotation
Am02G005630.1	Glycosyl hydrolase family protein with chitinase insertion domain

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am02G005630.1	mRNA	Chr02	24799199	24801259	-

Sequences

CDS:

>Am02G005630.1
ATGGCCGTCCAAAGAATCATAGCTATAATCACACCCCTTTTTGTTCTAATGAACCTCCCTTTCCATGCATTTGCTGAATCTTCAGATAATTTGCACCACCCAACAACATTTAATGGAGGTGTTAGAGCTGCATATTGGCCATCAGGTGGTGAATTTTCAGCTTCTACGGTTAACACAAAGTACTTTACTCATATTTTCTATGCTTTCATCCAACCCGACCCATCCTATAAGCTCGATATAACCGAATCCGACAAAAAATTGATCCCACAGTTCATCAAAGGGCTACGCTACCGTAACCCGCCGGTGAAAACTCTGTTTTCCCTAGGAGGAGGTGGTAGTAATTCAACTCTTTTCTCTGAAATTGCTAGTAAGGAACAAAATCGAAAAATCTTCATAGATTCGACCATCAACGTGGCACGAGAGTATGGGTTTGATGGTGTTGACTTGGATTGGGAGTTTCCGGGGGATCAAAAAGACATGTTTAACCTTGGTTTGTTGTACGAGGAATGGCACCGTGCTTTGGTGTCTGATGCTCAGGTTGGGAGAAAACCGCGTTTGCTTTTGACATCTGCTGTGTACTATAACTCGACAATAAGGCTTATTGGTGATGGGCCGAGATCGTACCCGGCCCAAGCCATTAAACAATATTTGGATTGGGCTAGTCCAATGTGTTTCGACTATCACGGTACGTGGGACAACAATACGGGCTTTAATGCTGCTTTGTTTGACCCAAGTTCTGAAATAAGCACCCATTTCGGAATCAATTCATGGATTAAGTCGGGTGTACCAGTGGAGAAGTTGGTTATGGGTTTACCGTTATATGGGAGGGCATGGAAACTGAAGGATCCGAAAGTTAATCGAGTTGGGGCCGAAGCGGTTGGACCGGCCACGGACACAGATGGTACTCTAGACTACGATGAAATCTTGAAGTTTAACAAAAAGACTGGTGCTACTGTTGTGTATGATAAGGCTGCTGTGGCTTTTTACTCTTATGCTGGCACTACTTGGATTGGGTATGATGATGGGCCATCCATAACAACTAAGGTTCGGTTTGCTAGGTCAATGGCCTTAAAGGGCTATTTCTTTTGGGCTCTTGGGAAGGACAAGGATTGGACCATCTCAAAACAAGCTTCAAATGCATGGGGACACTAA

Protein:

Promoter(3k):

>AM02G005630.1
TTAAATCGTGAACTTTTAATAATACACACCCATGAAAAGATTGTGTGTGGTTTTGATAATAGAGATAGAGTTCAAGACTACAAGTCACTCTTGTTGAATCTAAATCCTAATCACTATGCAAAGGTTCGAATCGCTAGACACTTCTGTTTATGCACAATCTTATGGAGGCGTTTGACGCTATTTCTAAAACCCTTTTTTTAAAAAAAAGTTCAAGCGAAGGATTTTTGGAACTTGGTGAATTGAGAAGTCCCACATTGAAAGGAATAGACACTTTATGAGTGCTTATAAGTGTGAAAGAGAGAGAATGCACACAAACTGACCACCACACACACGCGACCGCTGTCCGTCCGGCTGGGTTAGCCTTACGCTAAGTGGTGTAATTAATTAATTTTTTTTTACTAAGTCGCCAACAGTCATATCCCTTAATTGTCTCACGCGTTTTTGACCAGTCAAAGAGCCGTTATGTTTTTCGCTCCAATCAAAGAGGTGTTGCGCTTTTTTCTCTATTGCGCCTTTTGCTCTAGCTGTTGCACGCGAATAGCAGCAACTATAAATGTACCACTGGTAACACTCTCTTATAAATAGAGACCTTTCCTCAGTTTCCAAACCGCACCGAAAACTCAAAACATTCTCGAGAGTGTAAGTCTAAAACGAATTTTCACCGTGCAGTGGTCTTTCGTAATAGTTTTCATATAGGTTGTTTTATCCTGAGGATGTTATGGCTGATAGCGTGCTTGCACAACTTTGAGCGGTACCGTGAAACATTTTAAAGAGAGCGACATAGTTCGCGACTTAACCCCGTAATCTTTTCGTTCACTGATTAATCTCTCAACAATAGTCTCCAATGTCATATTCAAATGTCAAAAAATTATATACCGACCCAAAAAAACGTTAATAAAAGAAGCAATACATAGCTTAAGGTCTTTGTATTACGTAAGTTTGTTACAGGCCTTGAATATTTCTCTTCGACTGTGTTTCTTATATAGTTTTAAGTTCGTTGTTTTTAGAGGATTTTTCTCATTGTCGATTCTTGTTTGTTAAACAGTGTACGTCAGTTTGTGCATCATGTTCTAGTGAACCAAAACGGTAGTAATGGGTCCTCCTGTCTTAGCCCCTTCCTCACCTTAAACTCTTTGACAGAACTGCCATTTACCAGAATCGACATATATGTACTTTTGGACACTTATTGTTTTTTATTTTCTCTTATCTATATTTCATTACTCTAAAACATCAATCAAGCCTACTGTATTTGTCTCTAATGTCATATTCAAATGTCATAAAAAAAAACATATACAGACCCAATAAAACATTAATAAAAGAAGCAATGCATAGCTTAAGTTCTTTGTATTACGTAAGTTTGTTACAGGGCTTGAATATTTTTCTTCGACTGTGTTTCTTATATAGTTTTAAGTTCCCTGTTTTTAGAGGATTTTTCTCATTGTCGATTCTTGTTTGTTAAACAGTGTACATCAGTTTGTGCATCATGTTCTACTACTTATTTATTTTTGACATAATCTACTACTTATTTTTATAACAGCGTACATCAGTTTGTTTAAGATATTAATGCTTCCTCTTATTTGGCTAATGTATAGTGTGAGTAGGTAGTTCAGTTGGCGATCGAGCTAAGGATATCGAATGAGTGCACTAAAAGAGTGCAAGAATGAGGTCTGGGGTTTAAACCCCGAAAACTAACATTTCCCCACCCCCACTAACATTGCTTATAAAAAAAAAAAGTTATGCCCAATATTAAAAAAAAAATCTATATTGAATATTTTATACACCATGAATCTGTTAATGGATTGCAACATCAGTGGTCACACAACAAATGCACTAAATGCGTACAACACTAACAACAAAAAAACAGCGTGCTATATGCTCCATTAGCAAGTGGGGTTTGACCCGGTGGGAGAGTTCGAGGGACTACTGGAAGCAACAACGAGCTAGCCAATGAATCACACTACCAAGAGACTTGAATGTAACATCTCCACAAAAAACCTTAAAAAGTTAAGTATATGAGTCTCATTTCTTATATGTTATTCATATAGCTCATTCATAGCTAATGTAGACTAAATATTGGTCTCGATTCATACTGCACTTGAATTCTCATAAGGACCTTCCAAGAGAATAAATAACTAAATGGAATTTATTTATTCTTGTTCGGCATAATTTGTTTACATACCTCCTTTCACATACATCAAAAAATGAGGCAATTTCTGGTACATATTCAATTAATATAACGAGTAAAATACAAGCAAGTTCAACTTTTACAAGATTTGAAAGTATAGTAGCCGAACCAATATAATGTGACACACATCTAGATACTCAAGTCACTTAATTATTTGGTTATGGATTCGATCTCAGGCTAATGCGTATGGAAAAATATTTGTTGGAAGAGGTCAACCCATTAAATAGATCTCAGATATCTCGAAGGATTAGTCTCCACAGTCATCGTGGAAGATACCTTGGTTTATCAAAAAAAAAAATTATCGTAGCCGAACTCTAGAGTACTTGGATGAGACTGTTTGGATCTCTTCCAGCTTAATCAAGATCGTGGGTTTAAATCCAGCATTGCCTTTGCTGCCTATTGTGATCCTACTCAACTAAATGAATTGGGTTTAAATCCAGCATTGCCTTTGCTGCCTATTGTGATCCTACTCAACTAAATGAATTAGTTTTGCGCACAAAGAATATCCAATTTATAAAAAAAAAGGAAAATATTATAGCCGAACCTCGTGGTGTGCACCATTATTAATCTAGACCCGTTGACTTGTATTATATTGGTTGCCTTGTTCAACTTTTGTTCCATCTCTTTGATTTTTTCCCGTTGCTGTTTATCTCTTTTAGTGGAACCTTCAATTCAAACCACACCCTTCATAAAAGTTCAATCATAAAATTCCAATTTTCCAACACCACCCAACTTTATAAATTAATATCCACTTGTTTCCTTATCTATACCATATAAATTGACATACACATTCTCGTACTCTTATAACATTAACC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00704.31	Glyco_hydro_18	44	368	7.00E-75

Gene family

Gene family	Subfamily
Carbohydrate-Active enzymes Family	GH18

Gene Ontology

GO term	Description	Category
GO:0005576	extracellular region	Cellular Component
GO:0004568	chitinase activity	Molecular Function
GO:0016020	membrane	Cellular Component
GO:0005975	carbohydrate metabolic process	Biological Process
GO:0050832	defense response to fungus	Biological Process

InterPro

InterPro term	Description
IPR001579	Glycosyl hydrolases family 18 (GH18) active site
IPR017853	Glycoside hydrolase superfamily
IPR001223	Glycoside hydrolase family 18, catalytic domain
IPR029070	Chitinase insertion domain superfamily
IPR011583	Chitinase II

trEMBL

trEMBL term	Description
A0A1S2Y5C5	_

SwissProt

SwissProt term	Description
CHT5A_MEDTR	Class V chitinase CHIT5a

KEGG

KO	Description	Enzyme
K01183	chitinase	[EC: 3.2.1.14]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT4G19810	Glycosyl hydrolase family protein with chitinase insertion domain
Medicago sativa L.	MsG0180000566.01.T01	_
Oryza sativa L.	LOC_Os11g27400.1	glycosyl hydrolase, putative, expressed
Cucumis sativus L.	Csa016433	_
Glycyrrhiza uralensis Fisch.	Glyur000128s00010799.1	_
Codonopsis lanceolata	Cl_chr01_49150T	_
Arachis hypogaea L.	AH16G36900.1	Acidic mammalian chitinase like

Expression pattern