| Gene ID | Annotation |
|---|---|
| Am02G005130.1 | TBP-associated factor 5 |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am02G005130.1 | mRNA | Chr02 | 21822855 | 21833770 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF00400.35 | WD40 | 408 | 440 | 1.20E-53 |
| PF00400.35 | WD40 | 447 | 482 | 1.20E-53 |
| PF00400.35 | WD40 | 487 | 524 | 1.20E-53 |
| PF00400.35 | WD40 | 528 | 566 | 1.20E-53 |
| PF00400.35 | WD40 | 570 | 608 | 1.20E-53 |
| PF04494.18 | TFIID_NTD2 | 52 | 180 | 6.50E-42 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | DWD |
| Epigenetic Regulators | TAFV1 |
| GO term | Description | Category |
|---|---|---|
| GO:0016251 | RNA polymerase II general transcription initiation factor activity | Molecular Function |
| GO:0005669 | transcription factor TFIID complex | Cellular Component |
| GO:0006367 | transcription initiation at RNA polymerase II promoter | Biological Process |
| GO:0003743 | translation initiation factor activity | Molecular Function |
| GO:0006413 | translational initiation | Biological Process |
| InterPro term | Description |
|---|---|
| IPR036322 | WD40-repeat-containing domain superfamily |
| IPR015943 | WD40/YVTN repeat-like-containing domain superfamily |
| IPR019775 | WD40 repeat, conserved site |
| IPR001680 | WD40 repeat |
| IPR037264 | TFIID subunit TAF5, NTD2 domain superfamily |
| IPR007582 | TFIID subunit TAF5, NTD2 domain |
| IPR020472 | G-protein beta WD-40 repeat |
| trEMBL term | Description |
|---|---|
| A0A445GA65 | _ |
| SwissProt term | Description |
|---|---|
| TAF5_ARATH | Transcription initiation factor TFIID subunit 5 |
| KO | Description | Enzyme |
|---|---|---|
| K03130 | transcription initiation factor TFIID subunit 5 |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT5G25150 | TBP-associated factor 5 |
| Medicago sativa L. | MsG0380017369.01.T01 | _ |
| Oryza sativa L. | LOC_Os06g44030.2 | WD domain, G-beta repeat domain containing protein, expressed |
| Cucumis sativus L. | Csa014876 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000672s00022930.1 | _ |
| Codonopsis lanceolata | Cl_chr01_12080T | _ |
| Arachis hypogaea L. | AH20G25860.1 | Transcription initiation factor TFIID subunit 5 like |