Detail information of Am02G004980.1 Annotation
Gene IDAnnotation
Am02G004980.1 ubiquitin-specific protease 19
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am02G004980.1mRNAChr022099175420998834-

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF00443.32UCH1774805.60E-47
PF13423.9UCH_11784621.50E-16
PF01753.21zf-MYND681051.90E-08
Gene family
Gene familySubfamily
Ubiquitin FamilyUSP

Gene Ontology
GO termDescriptionCategory
GO:0016579protein deubiquitinationBiological Process
GO:0005829cytosolCellular Component
GO:0005634nucleusCellular Component
GO:0046872metal ion bindingMolecular Function
GO:0016020membraneCellular Component

InterPro
InterPro termDescription
IPR002893Zinc finger, MYND-type
IPR018200Ubiquitin specific protease, conserved site
IPR028889Ubiquitin specific protease domain
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolase
IPR038765Papain-like cysteine peptidase superfamily

trEMBL
trEMBL termDescription
A0A1S2Y4T9 _

SwissProt
SwissProt termDescription
UBP19_ARATHUbiquitin carboxyl-terminal hydrolase 19

KEGG
KODescriptionEnzyme
K11855ubiquitin carboxyl-terminal hydrolase 36/42[EC: 3.4.19.12]

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT2G24640 ubiquitin-specific protease 19
Medicago sativa L.MsG0180000494.01.T01 _
Oryza sativa L.LOC_Os06g44380.1ubiquitin carboxyl-terminal hydrolase family protein, expressed
Cucumis sativus L.Csa009297 _
Glycyrrhiza uralensis Fisch.Glyur000587s00026621.1 _
Codonopsis lanceolataCl_chr02_33510T _
Arachis hypogaea L.AH20G26500.1Ubiquitin carboxyl-terminal hydrolase 19 like

Expression pattern