Detail information of Am02G004960.1 Annotation
Gene IDAnnotation
Am02G004960.1 RING/U-box superfamily protein
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am02G004960.1mRNAChr022096048020963034-

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF13639.9zf-RING_22322748.70E-13
PF13923.9zf-C3HC4_22322739.00E-09
PF17123.8zf-RING_112322602.30E-07
PF00097.28zf-C3HC42332731.50E-06
Gene family
Gene familySubfamily
Ubiquitin FamilyRING

Gene Ontology
GO termDescriptionCategory
GO:0016567protein ubiquitinationBiological Process
GO:0005737cytoplasmCellular Component
GO:0046872metal ion bindingMolecular Function
GO:0006511ubiquitin-dependent protein catabolic processBiological Process
GO:0004839ubiquitin activating enzyme activityMolecular Function

InterPro
InterPro termDescription
IPR001841Zinc finger, RING-type
IPR013083Zinc finger, RING/FYVE/PHD-type

trEMBL
trEMBL termDescription
A0A6A4NG60 _

SwissProt
SwissProt termDescription
AIP2_ARATHE3 ubiquitin-protein ligase AIP2

KEGG
KODescriptionEnzyme
K16274E3 ubiquitin-protein ligase AIP2[EC: 2.3.2.27]

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT5G20910 RING/U-box superfamily protein
Medicago sativa L.MsG0180000493.01.T01 _
Oryza sativa L.LOC_Os09g26400.1zinc finger, C3HC4 type domain containing protein, expressed
Cucumis sativus L.Csa009299 _
Glycyrrhiza uralensis Fisch.Glyur000587s00026623.1 _
Codonopsis lanceolataCl_chr08_24130T _
Arachis hypogaea L.AH16G44830.1E3 ubiquitin-protein ligase AIP2 like

Expression pattern