Detail information of Am02G004130.1 Annotation
Gene IDAnnotation
Am02G004130.1 histone deacetylase 2
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am02G004130.1mRNAChr021673940916746240+

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF00850.22Hist_deacetyl1043701.10E-43
Gene family
Gene familySubfamily
Epigenetic RegulatorsHDA2

Gene Ontology
GO termDescriptionCategory
GO:0006338chromatin remodelingBiological Process
GO:0000118histone deacetylase complexCellular Component
GO:0010468regulation of gene expressionBiological Process
GO:0046872metal ion bindingMolecular Function
GO:0016020membraneCellular Component

InterPro
InterPro termDescription
IPR023696Ureohydrolase domain superfamily
IPR000286Histone deacetylase family
IPR037138Histone deacetylase domain superfamily
IPR023801Histone deacetylase domain
IPR044150Histone deacetylase 11

trEMBL
trEMBL termDescription
A0A1S2Y3W6 _

SwissProt
SwissProt termDescription
HDA2_ARATHHistone deacetylase 2

KEGG
KODescriptionEnzyme
K11418histone deacetylase 11[EC: 3.5.1.98]

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT5G26040 histone deacetylase 2
Medicago sativa L.MsG0180000408.01.T01 _
Oryza sativa L.LOC_Os06g37420.1histone deacetylase, putative, expressed
Cucumis sativus L.Csa009335 _
Glycyrrhiza uralensis Fisch.Glyur001818s00030076.1 _
Codonopsis lanceolataCl_chr01_07320T _
Arachis hypogaea L.AH16G38370.1Histone deacetylase 2 like

Expression pattern