Gene detail

Detail information of Am02G003950.1 Annotation

Gene ID	Annotation
Am02G003950.1	Homeobox-leucine zipper protein family

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am02G003950.1	mRNA	Chr02	15597245	15604001	+

Sequences

CDS:

Protein:

Promoter(3k):

>AM02G003950.1
ATCAATTTATAATATGTTATCAATATGAAGCTCTAGCCAATTGAGATTTGAAAACATGGAGCATTGTGTTGTGCAAAAAGTAACATTTTATCATGATTACGCGTCATCTTTTTTATGGTATCGATTTCTAACTATTTTTTATATTTACAATTTTAGATTTTATCTAACTTATTTTATATTTTTATGATAGTACTTGTTCACGAATAAGCGAATAGGTTACAACGGCCTCTCAAGCAGTGCGCTTCTCAAGGAAATGGTATTACAATTAATGTGTACTTCAAAAGTGTCCTTTATAGTGACTTGTGGGCTCATATATCAAGTTGTTACAAATGATACTTAATACTAATACTTGCATATGGGAATTACATACGCGTTAAAACAGAGAGTCGGGCCTAATAACAGCAGGTAAATGCCACATAGATTAATCTTTCGGACGCGACCTTTTTTGTGTTGACTAGTCGATTCACCCCCGTGTAGGTACCCTTCTCGCTTGATCTACGAATACCTTGCAAGGTCGGCCTCTTAGTTGTAGTCGTCGGTCGACCATTTCGATATACAGTCCTTCGAGCATCCACTACAAAAAAACATGGATTAGCGACGGATTTTAGCGACGAATTGGAAGTTCGTCGCTAAAATCAAAATTAGCGATGGAAATGCACAAAATTAGCGACGGATTGAAAACAAGGTATTTAGCGACGGAAATTCGCTAAATTAGCGACGGATTTAACATGGCGCGAAAATTGAAAAAAAAAATTGAATTAGCGAGGGAAATCCGTCGCTAAAATCCGTCTCTAATCTTTGGAAAATTGTGCCACTGACCGTTGCTGTTGATTTGACACGTGACCAGAATTAGCAAGGGAAATCCGTCGCAAAATCCGTCGCTAATTGTTAATTTTTTTTTATAAACCCAAATCCTTTCTTTCCTCTTTCATTTCTTCCTCTTCCTCTTTCATTTCTTCCTCTTTCATTTCTTCCTCTTCCTCTTTCATTTCTTCTTACCACCACCACCATCATCTTCTCCCTTCACCACCACCACCACCACCACACCATCCTCTTTCATTTCTTCCTCTTCCTCTTTCATTTCTTTTCCTTCTCCATTTTCCTCTTCCTCTTTCATTTCTTCCTCTTCCTCTTTCATTTCTTCTTACCACCACCATCATCATCTTCTCCCTTCAACACCACACCACCACCCCCACCACCACCACACCATCCTCTTTCATTTTTTTTCCTTCTCCATTTTCCTCTTCCTCTTTCATTTTTTCTTACCACCACCACCACCATTATCTTCTCCCTTCAACACCACACCACCACCACACCATCTTTTTCTTCCCTTATCTCCCCAACCCCTAATCTCTCCCTCTCTCTATCTGAGAATAGCTTTTTTTAAAAAAAAAATGAGGTTAGCGACGGATTTTAGCGACGGAAATCCGTCGCTAACTTTGGTCAGTGTCAAATCAACTGCAACGGTCAGTGGCACAGTGTTTTTAGCGACGGATTTTAGCGACGGATTTTCCGTCGCTAATTTTAGCGACAGATTTTATTCCCTCGCTAGGCATTAGCGACAAGTGGTTTAGCGACGGAATTGTTCCGTCGCTAACAGTCAGTAGCGAGGGAAAAACAGGCATTAGCGAGGGAAAAATCCGTCGCTAATACACTGTTTTTCTGTAGTGATCGAACCTACAAGGAGAAAGAAATCTAAGTTCCAACTGTTTGTCGCACCAATTCTTTTCGCATCATTTCAAGTCCTTTGGTCTCTTGCGTTTTGCTCAAGTTCTTCAATCTTTGATTTCCTCCATGTTGCTTAAGTCCTTCGGAGAGGTTCCCTTTGGATCCCACTATTTGGATTGGGTTCTGGCCGGTCTATCTCAAATGACTTTAATGATTTCGCTGACTATATACCACATTTATTGTAATTTTACGCTGTTTTCCGTATCGTATAACACCACTTAAAGACTTCTGTTTTTCCGCCCAAAGCTTTAAATTCTTCGTGATGATTCTTCCTTCTGCCTCCTCTATATAAAGGCTTCCCCTCTCTTTGTTTGGCCTCATCTCCCTGTGCTTTATTTGTGTTTCCTCGTGAATTCTTTTTTAACTTAGGTATTCTAAGCATTCTCGACAAGCATCGTCTTGAGGATATAATAGTCATTTATGGCAACACATTGTGTTGCCAAAGATATAAACCAATTTTGCAAAAGGGAACACTTACTCAATTTTGCAAAAAGAGTGATGTTGTGTAAAACACTCACTTTATGGCAATAGTTTCATGATGTTAGTGAATATACTCTCAAGCAAGATTTCTCACTTGTTGGGAAACAATGTGTTGCCAAAGATCAAAAATGTTGTGGAGTGATTCCCTACTTTTCCCCTATATGACTGGAATCTACGACTCTAAGTGTAGGTAAAGCATCTTAATTACCAACCAAAGCGTGATTTGTTGTCACCCAATGTCAAATCAACGCCATATTAAATTGGTTAATTACATTGATTATAAATGTCCGAAATAAAGAAGAAAGCAAGAGTAGTAAGAAACGTGAAAAAGGAAGAAAAGGTAAAAAGACCTAGATCATATTAATTTATGCTCTTTATTGTGCTACCCACTTTCCACGTGATTCCACGTATACCATATACAATGTACACTTCATCATGCTTGTTATTTTGCTGAACTTGTTCTGCTTGAATAAAAGGGATGAGTCATTAACTTTCGCATAGTCAAACTATAAGCCAAAAAGAAGAAATAAAAGTTTCATATATAACTTCCAGAATAATAACCACATTTAAATTTAATCAATATATATTTATTCTTCCATTTGCCCAATATCATAAATCCTCTTAATTCATTCTCAATATCACACAACTCTCTCCACATTCCTATCATCTCCTCTCCTACATCACATCCTCTTCAATTCATATATTATATATAATATATTCAAAAATTACAACCTGCAAACTCCTTCAATATTTTTCATATCAAGGTTAATTTCCATCTCAAATTTATATATT

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00046.32	Homeodomain	117	171	2.10E-16
PF02183.21	HALZ	173	206	8.90E-08

Gene family

Gene family	Subfamily
Transcription Factors Family	HB-WOX

Gene Ontology

GO term	Description	Category
GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	Molecular Function
GO:0006357	regulation of transcription by RNA polymerase II	Biological Process
GO:0005634	nucleus	Cellular Component
GO:0043565	sequence-specific DNA binding	Molecular Function

InterPro

InterPro term	Description
IPR003106	Leucine zipper, homeobox-associated
IPR009057	Homeobox-like domain superfamily
IPR017970	Homeobox, conserved site
IPR001356	Homeobox domain

trEMBL

trEMBL term	Description
A0A072VD79	_

SwissProt

SwissProt term	Description
HOX11_ORYSI	Homeobox-leucine zipper protein HOX11

KEGG

KO	Description	Enzyme
K09338	homeobox-leucine zipper protein

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT4G37790	Homeobox-leucine zipper protein family
Medicago sativa L.	MsG0180000372.01.T01	_
Oryza sativa L.	LOC_Os09g27450.1	homeobox associated leucine zipper, putative, expressed
Cucumis sativus L.	Csa012151	_
Glycyrrhiza uralensis Fisch.	Glyur000605s00024924.1	_
Codonopsis lanceolata	Cl_chr01_59910T	_
Arachis hypogaea L.	AH16G38720.1	Homeobox-leucine zipper protein HOX27 like

Expression pattern