Detail information of Am02G003550.1 Annotation
Gene IDAnnotation
Am02G003550.1 FAR1-related sequence 5
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am02G003550.1mRNAChr021413169414139050+

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF10551.12MULE2733673.30E-25
PF03101.18FAR1651521.10E-21
PF00872.21Transposase_mut2724551.30E-07
Gene family
Gene familySubfamily
Transcription Factors FamilyFAR1

Gene Ontology
GO termDescriptionCategory
GO:0008270zinc ion bindingMolecular Function
GO:0005634nucleusCellular Component
GO:0006355regulation of DNA-templated transcriptionBiological Process
GO:0003676nucleic acid bindingMolecular Function

InterPro
InterPro termDescription
IPR007527Zinc finger, SWIM-type
IPR006564Zinc finger, PMZ-type
IPR001878Zinc finger, CCHC-type
IPR003657WRKY domain
IPR018289MULE transposase domain
IPR004330FAR1 DNA binding domain

trEMBL
trEMBL termDescription
A0A2K3L384 _

SwissProt
SwissProt termDescription
FRS5_ARATHProtein FAR1-RELATED SEQUENCE 5

KEGG
KODescriptionEnzyme
K17604zinc finger SWIM domain-containing protein 3

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT4G38180 FAR1-related sequence 5
Medicago sativa L.MsG0880042153.01.T01 _
Oryza sativa L.LOC_Os11g19030.1FAR1 family protein, expressed
Cucumis sativus L.Csa013491 _
Glycyrrhiza uralensis Fisch.Glyur004859s00040111.1 _
Codonopsis lanceolataCl_chr01_42680T _
Arachis hypogaea L.AH03G17450.1Protein FAR1-RELATED SEQUENCE 5 like

Expression pattern