Gene detail

Detail information of Am02G003330.1 Annotation

Gene ID	Annotation
Am02G003330.1	acyl-CoA binding protein 2

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am02G003330.1	mRNA	Chr02	13014140	13018447	-

Sequences

CDS:

>Am02G003330.1
ATGGAGCTCGTAACAGCGAGTGATCTTCTCGTTACTGCATCTGTAGCGCTTCTTTTATCTTTCCTTGTTGCAAAGCTTGTTTCCTTAGCCATGACCGACACACACAACACGACAAATCATCATATCATCAACGATGAACCTGTCGGTCCGGTTCTTAGAACAGAACAACGTTTGACGGTTCAGAGTCATCAAAACGAGAGTCGGATCGGTTATATTAGTCCGGTTCAAGTTACAACAACAGCGAATGTAGAAACTGTAGAAACCGAACAGGAGAGAAGAGATGTTATGGTTGACTCTGATTCCGACGTTGTTGTCGAGTTACCGATGCCGGTGAAGAAGTCAGAGGTTGTTTTTGAATTAACGGAAGAGAAAACTGTTGTAGAACAGAGGAAAGAGGAGTTCGTTGAGGAAATCAAGGAAGAAAATTTGACTGAGACTGTAGTTGAGAGGGAAGTGAATGAAAAAGTTGAGAAGAATGATGATGATGATGATGATGATGGTGATTGGGAATGGGAAGGGATTGAGAGGAGTGAGATAGAAAAATTGTTTATGGAGGCTACGAAATTTGTTGCTGAGAAAGGGTTTGATGATGACGTGGAGATGGAATTGTATGGACTTCACAAGGTTGCGATGGAAGGACCTTGCCGTGAAACTCAGCCAATGCCACTCAAACTCTTTGCACGTGCCAAGTGGAACGCTTGGCAAAAGCTGGGGAACATGAGTCCTGAGGTTGCGATGGAGCGATATATCAGCATTCTTTCGGATAAAGTTCCTGGTTGGATGAAAGATACTTCTTCTGCTGGAATAACTGAACTTGAACCCGAACCGGCAGGGTCTGAAGTTTCTGAATCTGCTGCTCTTGATTTGAGCTCATCTTTGTCTCATCAACAATTGACCTCGACCGAAAGGGAACTTGAACAAGAGTCTGGTGATCGGGACATTAGCCCACTTACAGAGTCAGATTTGGAGAACAATGTAAGATTTTGA

Protein:

Promoter(3k):

>AM02G003330.1
AAAAAAACCCAAATTGTTTTAAACCAATATCTCAGTAAAGAGTGGCTAGCATCAAATGGTGCTAGCCCAATTGTGCAAGCCCAATTAGTTATATTAAATAAAAATATTAACAGCTTAGGTTTTTTTTGTACCCCCATCACATAACAATCTACCCCTCATCGACCCTGCGAAAAGACGCAATTGCCCTTTACAAAATTTAAAAAACCCGAACGTATCCTGATTTCAATTTTTTTTTGGAAATCAGATTTATGTATCTGTGAGGTAAATCCGATTTCCAAATCGGATTTATGTATCTGTGAGGTAAATCCGATTTCCACTGAAAATTTTAAAAATTTAAAAGCGGATTTATTTAAGATGGGGTAAATCCCTTTTTAAAAATAACAAAGCGGATTTACCTTATATAAGGGTATATCCGCTTTTAAATAACAAAAGCGGATTTACCTTATGTGGGGGTAAATTCGCTTTGTTAACCTAATAAATAAATAAATCTGGATTTACCTAATTAATAAATAAATAAATCAGTTAGAAAGTTAGATACGAATTTTGACCGTCTTTTGGTTCTGTTTAGTGTGTAGTTCGTTAACACGTGACGATGTTATACGTCGAGCGAATAATTTAGGCTAAAAAATCGGTTCTCGGACAATCTGCTCAAATTGTAATGAAACCACAACCATTAAATCCGAAAAAAATCAACGATCAAGACTCTTCAAGAAGAAACTTCTTTCAGACAGGGGACCTCAGAATCCCAAATTCCATCGTTTACTAATTTTTTACTAATTTTTGGCTTAATTACAGTTTTGGTCCCCCTATTTTCCCCAATTCACGATTTTGGTCCCCAAAGTTTTAATTTGACAATTTTGGTCCCCCTATTTTCCCAATTTGTAAAATCAAGGTCCCCCTCTTAATTGGTCAAAATTGAAAGTCAATTTTGACTGACTTATCCTACGTGGCAGCCCACGTGGACTGCCACGTAGGCGCAGCCCCCACCCCCACCTTCTTCTTCGCGCTCAACCTCTCCACTGTTCCTCTTCCCCTCCCACCCCCCCTCTGTGAACCTCTCATCTCCACGGCGCCGTTCCCCACTCTCTCTTCTCCCACCGTTTGCTCGTGGACTGCCACGTAGGCGCAGCCCCCACGCCCACCTTCTTCTTCGCGCTCAACCTCTCCACTGTTCCTCTTCCCCTCCCACCCCCCCTCTGTGAACCTCTCATCTCCACGGCGCCGTTCCCCACTCTCTCTTCTCCCACCGTTTGCTCTCTCTCCCTCAAACGTGACTCCGTTTTCGTCTCCCCCCGATCTCCTCTCACGCGGCACCGTCCCAACCCAAACTCTCTCAAACCCTAATTTCTTCACTTCCCTAATCTCTCACCAGCCGCACCACCCAAACGGAGAGAGAGAGAGAGATTTTGAAGAGAGGGAAAAAAAGAGAATGGGAGTTCAGAGGGAGAGAGAAATGGGGGAAAACGCGAAGAGGGAGAGGGTGAGATGGAGTCACGTCGGTGACCAAACCAAGCTCCGGTGAAGGCGACGATGGGTTCGATGGTGGAGGTAACAGAGGTTGTGGGGGTGGATGCGTGATGGCGAAGTGAGGGTGAGGCTACGGTGGTGGCGACGGTGAGATGGTTGTTCGGTGGGAGGGGAAGAGGAACAGTGGAGAGGTTCAGGAGCGCGAAGAAGAAGGTGGGGGTGGGGGGTGGGGACTGCACCTACGTGGCAGTCCACGTGGGCTACCACGTAGGATAAGTCAGTCAAAATTGACTTTCAATTTTGACCAATTAAGAGGGGGACCTTGATTTTACAAATTGGGAAAATAGGGGGACCAAAATCGTCAAATTAAAACTTTGGGGACAAAATCGTGAATTGGGGAAAATATGGGGACCAAAACTGTAATTAAGCCTTAATTTTTTTAATTTTTCATAATTTTCAAAAAATCTAAAAAAATTTGCATAAACTTATTTTGGTTTTATTAGATTTTTAGTGGTGTTTTGATAATTTTTGGATTAGTTTTGACTCTTTAACGAATTTTTAGTAGCATTTTTTAAAAATTTTAATAAAAAACAATTATTTTTAATAACAAAATCGGATTTACCTTAGGTGGGGTAAATCCGAATTTCTTTTTTAGGGAAATCGGATTTATCTACCCACTAGGTAAATCCGATTTGAAAAATAACAAAGCGGGTGTATCCCCATCTGAGGTAAATCCGCTTTGTTATTTTTAAAGTCGGATTTACCTATTAGGTACCCTCATTTGAGGTAAATCCGCTTTGTTATTTGGGCAGAGGTATTTTCGGGTATATAGAATGTGATGGGGGTAAAAAAAAAACCAACATCCTATAGCAAGTGTCATATAGTCTTTAGCCACCCCCAAATGCATGTGGTATAAGCGGTAAATTACTTGGCCCTTAAATATGTCGTTAACTTCGTTGGAGCAATTTCCCTCAATATCGCATTGGCAATGACTATGCAACTAAATCTGCTGCTGCCGTTGCTCAACGGTCATCCATCTAATTCGTGCTTAAGCCCACCCCACCTGCGGCAGGTAGTTATGAGTGATCATTAACGACGTGGTCGTGTATATCCACCTTTTCACGCTTTTCTGTTTCGACACCTTGGTGACTCTTTCACCCGTGTCTCCAACACAATGGGACCCACACTACCCCTCCCAAAACCAAAAAGTTATCCAAAAACAAAAAGATACATATAAATCTTTATTGTTTTTATAATTTTCGCATCATAGCCCCCAAAGCATAAAGTGAAAAAAACCGCAGAATATGCTTTGCTTCCGTTCTTCAGATTATCCTTTCCTCTTTTTTCTCAACTTTCTTCTTTAACTTCTTTCCTTCTATTCATTTCCATCCTAAATTCTCTCATTAATTTAATTTTTCTCTCTTCAAAACAAACCTCCCTTTAATTTAACCCTCAATTGAAAACTTTCTTCTCACTTCACAACTTGGTGAGATTTCATTGTTGACAAACAAAAAAAAGAAAGCAAGTGTTATT

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00887.22	ACBP	181	253	9.10E-21

Gene family

Gene family	Subfamily
--	--

Gene Ontology

GO term	Description	Category
GO:0000062	fatty-acyl-CoA binding	Molecular Function

InterPro

InterPro term	Description
IPR014352	FERM/acyl-CoA-binding protein superfamily
IPR000582	Acyl-CoA-binding protein, ACBP
IPR035984	Acyl-CoA binding protein superfamily

trEMBL

trEMBL term	Description
A0A2K3MY73	_

SwissProt

SwissProt term	Description
ACBP5_ORYSJ	Acyl-CoA-binding domain-containing protein 5

KEGG

KO	Description	Enzyme
K27751	acyl-CoA-binding domain-containing protein 6

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT4G27780	acyl-CoA binding protein 2
Medicago sativa L.	MsG0180000309.01.T01	_
Oryza sativa L.	LOC_Os03g14000.1	acyl CoA binding protein, putative, expressed
Cucumis sativus L.	Csa010202	_
Glycyrrhiza uralensis Fisch.	Glyur000229s00018884.1	_
Codonopsis lanceolata	Cl_chr03_52270T	_
Arachis hypogaea L.	AH16G39350.1	Acyl-CoA-binding domain-containing protein 3 like

Expression pattern