| Gene ID | Annotation |
|---|---|
| Am02G000940.1 | LSD1-like 3 |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am02G000940.1 | mRNA | Chr02 | 5708607 | 5718847 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF01593.27 | Amino_oxidase | 875 | 1341 | 3.20E-107 |
| PF13450.9 | NAD_binding_8 | 869 | 925 | 9.40E-15 |
| PF04433.20 | SWIRM | 625 | 705 | 1.00E-12 |
| PF01266.27 | DAO | 866 | 901 | 7.40E-08 |
| PF07992.17 | Pyr_redox_2 | 865 | 900 | 2.20E-06 |
| PF01946.20 | Thi4 | 866 | 902 | 2.50E-06 |
| PF00890.27 | FAD_binding_2 | 867 | 903 | 3.10E-06 |
| PF03486.17 | HI0933_like | 866 | 902 | 3.60E-06 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | SWI/SNF-SWI3 |
| Epigenetic Regulators | HDMA4 |
| GO term | Description | Category |
|---|---|---|
| GO:0032259 | methylation | Biological Process |
| GO:0046961 | proton-transporting ATPase activity, rotational mechanism | Molecular Function |
| GO:0005774 | vacuolar membrane | Cellular Component |
| GO:1902600 | proton transmembrane transport | Biological Process |
| GO:0050660 | flavin adenine dinucleotide binding | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR036388 | Winged helix-like DNA-binding domain superfamily |
| IPR035441 | TFIIS/LEDGF domain superfamily |
| IPR007526 | SWIRM domain |
| IPR009057 | Homeobox-like domain superfamily |
| IPR036188 | FAD/NAD(P)-binding domain superfamily |
| IPR002937 | Amine oxidase |
| trEMBL term | Description |
|---|---|
| A0A1S2Y4J3 | _ |
| SwissProt term | Description |
|---|---|
| LDL3_ARATH | Lysine-specific histone demethylase 1 homolog 3 |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT4G16310 | LSD1-like 3 |
| Medicago sativa L. | MsG0380017833.01.T01 | _ |
| Oryza sativa L. | LOC_Os10g38850.1 | amine oxidase, putative, expressed |
| Cucumis sativus L. | Csa003910 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000108s00010420.1 | _ |
| Codonopsis lanceolata | Cl_chr05_46130T | _ |
| Arachis hypogaea L. | AH16G00820.1 | Lysine-specific histone demethylase 1 homolog 3 like |