Gene detail

Detail information of Am02G000560.1 Annotation

Gene ID	Annotation
Am02G000560.1	P-glycoprotein 13

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am02G000560.1	mRNA	Chr02	3240896	3247769	-

Sequences

CDS:

>Am02G000560.1
ATGATGGATCAAGAAGTGGAGCTAGGCAGTGGCAGTGAGTCAAAAACAAGCAGCAAGGTGGTGGAGGAGAGTAAGATTAAGAGTGTGTCGTTTTTGGGATTGTTTGGTGCGGCTGATAGAACTGATTATGTGCTGATGTTTCTGGGAAGTGTTGGTGCTATTCTTCATGGTGCTGCTCTTCCTATTTTCTTTGTTTTGTTTGGACGTATGATTGATTCTTTGGGACACCTTTCTAACAATCCTCACAAATTAACCTCACGAATTTCTGAGCATGCTTTGTATTTGGTCTATCTTGGACTCGTGGTTCTCGTTTCAGCTTGGATAGGTGTTGCATTCTGGATGCAAACAGGGGAGAGACAAACAGCTCGTTTGAGGTTCAAATATTTACAGTCAGTACTAAAAAAGGACATTAATTTCTTTGATAATGAAGCAAGGGACGCCAATATCATTTTCCACATCTCCAGTGATGCAATATTGGTACAAGATGCAATTGGTGACAAGACAGGACATGCCATACGTTACCTATCTCAATTCATAGTTGGATTTGCCATTGGATTTACATCAGTATGGCAGCTTACACTACTCACCTTAGCTGTTGTTCCACTCATAGCTATAGCTGGAGGAGCTTACACTATTATTATGTCTACTTTATCAGAAAAAGGTGAAGCAGCTTATGCTGAAGCTGGCAAAGTTGCTGAAGAGGTGATTTCTCAAGTGCGTACTGTTTACTCATTTGTAGGAGAAGAGAAAGCTATTGGTTCTTATTCTAAGTCACTTGATAAGGCACTGAAGCTAGGAAAGAAGAGTGGTTTTGCAAAAGGAGTTGGAGTTGGTTTTACATATGGACTGTTATTTTGTGCTTGGGCATTGCTTCTATGGTATGCAAGCATACTTGTGAGGCATCATAAAACAAATGGAGGGAAGGCCTTCACTACAATTATCAATGTCATCTTTAGTGGATTTGCTCTTGGACAAGCTGCTCCAAACCTTGGTTCCATAGCTAAAGGGCAAGCAGCTGCAGCTAATATCATGAACATGATTGCATCAGTTTCAGACTCTTCTAAAAGATTGGATGAGGGCAATGTTTTGCCACAAGTAGAAGGAAAAATTGATTTCTGTGAAGTCAACTTTGCTTACCCTTCAAGAACCAATATGATCTTTGAAAATTTAAGCTTCTCAGTTAGCTCTGGGAAGACAGTAGCAGTTGTTGGTCCCAGTGGTTCTGGAAAAAGCACAATCATTTCTCTTATTCAACGGTTCTATGACCCCACTTCAGGTAAGATTCTGTTGGATGGATATGACTTAAAGAATCTTCAATTGAAATGGTTGAGAGAACAAATGGGTATGGTGAGTCAAGAACCAGCACTATTTGCCACAACAATAGCTGCAAACATTTTATTTGGAAAACAAGATGCCAACATGGAACAAATCATACAAGCTGCTAAGGCTGCAAATGCACATTCTTTCATTACAGGATTGCCAGAAGGCTATTATACTCAGGTTGGAGAAGGTGGAACCCAACTTTCAGGGGGACAAAAGCAAAGAATTGCTATAGCAAGAGCAGTGCTTAGAAATCCAAAAATATTGCTTTTAGATGAAGCCACAAGTGCACTGGATGCAGAATCAGAACTCATTGTCCAAGAGGCATTGGAAAAAATCATGTCAAATCGGACAACAATAATCGTAGCGCATCGACTATCGACCATACGCGATGTAGATACAATTATTGTGTTGAAAAAGGGTCAAGTTGTAGAAAATGGTTCTCATTTAGAATTAATGTCAAAAAATGGTGAGTATATGAGCCTTGTAAGTTTGCAGACATCACCAAACTTTACGAATTCTAGCTCAATATCTCGCTCGGGCAGTTCGAGAAATTCTAGTTTTCGAGACAACATGAACAATGAGGAGGAGTTGAAGCTGAATACAACAAGAGAATTGCAATCAAGTGATCAAGGCAATGCTTCAGTTCCATCAATTTTTGATCTACTGAAATTAAATGCTCCAGAGTGGCCTTATGCAATACTTGGGTCAATAGGTGCAGTTTTGGCTGGCATGGAAGCTCCTCTCTTTGCCCTTGGAATCACACACATTTTGACAGCATTTTACTCTCCTAACGGTTCTAAAATCAAGCAAGAAATTGATAGAATAGCCCTTATATTTGTTGGAGTGGCTGTTATTACCATACCTATTTATCTATTACAACACTACTTCTATTCATTGATGGGAGATCGTCTCACCGCTCGTGTGCGTTTATTAATGTTCTCAGCTATTCTTACAAATGAAGTTGCATGGTTTGATAAGGATGAGCACAATACTGGCTCACTAACAGCAATGCTAGCTGCAGATGCAACATTAGTAAGAAGTGCTCTAGCTGATAGACTCTCAACCATTGTGCAAAATGTAGCTCTCACTGTAACAGCCTTTGTTATTGCTTTCACATTGAGTTGGAAACTAACCTTAGTAGTTGCAGCTTGCCTTCCCCTTCTCATTGGAGCTTCAATCACAGAGCAACTATTTCTCAAGGGATTTGGAGGAGATTACAGCCATGCTTACTCTAAAGCAACTTCACTGGCTCGTGAAGCTATCGCCAACATACGTACGGTCGCTGCTTTTGGCGCCGAAGATCGAATATCGATCCAATTTGCTTCTGAATTGAACAAACCTAACAAGCAGGCAGTTTTAAGAGGCCACATATCAGGTTTTGGCTACGGTGTGACGCAGTTATTTGCTTTCTGCTCCTATGCACTTGGCCTTTGGTATGCATCAATTTTAATCAAGAAGAAAGAGTCAAATTTTGGAGATATCATGAAATCCTTCATGGTCTTAATCATCACTGCTCTTGCAATAGCAGAAACATTAGCTCTTACACCAGATATTGTGAAAGGGTCACAAGCATTAGGATCAGTTTTCAGCATTCTACATAGAAAAACAGCCATCAATTCCAATGACTTCAATTCAAATATAATAACTGAAGTCAAAGGAGAGATAAAGTTTCAAAATGTGTGCTTCAAGTATCCAATGAGACCTGATATTGTGATATTTCAGAACTTAAACCTAAGAGTCTCGGCAGGAAAGAGTCTTGCAGTAGTTGGACAAAGCGGTTCAGGAAAAAGCACTGTGATTTCACTTGTAATGAGATTTTACGACCCCATTTCGGGGTCGATTCTGATCGATGAACGTGATATAAAAAGCCTAAACCTGAAATCCTTAAGGCAAAGAATAGGATTGGTTCAACAAGAGCCTGCTTTGTTTTCTACCACGGTTTATGAGAACATTAAATATGGAAAAGAGGAAGCATCAGAAGTTGAGGTAATGAAAGCAGCAAAAGCAGCAAATGCTCATGAATTCATTAGTAGAATGCCAGAAGGGTATAGAACTGAAGTTGGTGAGAGAGGTGTGCAGTTATCAGGAGGACAAAAACAAAGAGTGGCTATTGCAAGGGCTATTTTGAAAGATCCATCTATTCTTTTATTGGATGAAGCAACAAGTGCATTGGATACAGTATCAGAAAGGCTTGTTCAAGAGGCTCTTGATAAGCTTATGGAAGGAAGAACAACAATTTTGGTAGCTCATAGACTCTCAACTGTTCGCGATGCTGACAGCATTGCAGTGCTGCAACATGGGAAGATTGCTGAAATGGGTAGTCATGAGAGGCTGATGGCAAAACCGGGGAGTATCTATAAGCAATTGGTTAGTTTGCAGCAAGAAAAGCGTGACCGAGAAGACCATTAG

Protein:

>Am02G000560.1
MMDQEVELGSGSESKTSSKVVEESKIKSVSFLGLFGAADRTDYVLMFLGSVGAILHGAALPIFFVLFGRMIDSLGHLSNNPHKLTSRISEHALYLVYLGLVVLVSAWIGVAFWMQTGERQTARLRFKYLQSVLKKDINFFDNEARDANIIFHISSDAILVQDAIGDKTGHAIRYLSQFIVGFAIGFTSVWQLTLLTLAVVPLIAIAGGAYTIIMSTLSEKGEAAYAEAGKVAEEVISQVRTVYSFVGEEKAIGSYSKSLDKALKLGKKSGFAKGVGVGFTYGLLFCAWALLLWYASILVRHHKTNGGKAFTTIINVIFSGFALGQAAPNLGSIAKGQAAAANIMNMIASVSDSSKRLDEGNVLPQVEGKIDFCEVNFAYPSRTNMIFENLSFSVSSGKTVAVVGPSGSGKSTIISLIQRFYDPTSGKILLDGYDLKNLQLKWLREQMGMVSQEPALFATTIAANILFGKQDANMEQIIQAAKAANAHSFITGLPEGYYTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQEALEKIMSNRTTIIVAHRLSTIRDVDTIIVLKKGQVVENGSHLELMSKNGEYMSLVSLQTSPNFTNSSSISRSGSSRNSSFRDNMNNEEELKLNTTRELQSSDQGNASVPSIFDLLKLNAPEWPYAILGSIGAVLAGMEAPLFALGITHILTAFYSPNGSKIKQEIDRIALIFVGVAVITIPIYLLQHYFYSLMGDRLTARVRLLMFSAILTNEVAWFDKDEHNTGSLTAMLAADATLVRSALADRLSTIVQNVALTVTAFVIAFTLSWKLTLVVAACLPLLIGASITEQLFLKGFGGDYSHAYSKATSLAREAIANIRTVAAFGAEDRISIQFASELNKPNKQAVLRGHISGFGYGVTQLFAFCSYALGLWYASILIKKKESNFGDIMKSFMVLIITALAIAETLALTPDIVKGSQALGSVFSILHRKTAINSNDFNSNIITEVKGEIKFQNVCFKYPMRPDIVIFQNLNLRVSAGKSLAVVGQSGSGKSTVISLVMRFYDPISGSILIDERDIKSLNLKSLRQRIGLVQQEPALFSTTVYENIKYGKEEASEVEVMKAAKAANAHEFISRMPEGYRTEVGERGVQLSGGQKQRVAIARAILKDPSILLLDEATSALDTVSERLVQEALDKLMEGRTTILVAHRLSTVRDADSIAVLQHGKIAEMGSHERLMAKPGSIYKQLVSLQQEKRDREDH*

Promoter(3k):

>AM02G000560.1
TACACCTGTTTCTATAATGCCCAAATTGCTGACAGTTGTAGCATTGCACTTTCGACAGGTCACCTTTCTTGTCGAAAGATCCCTTCTTCTTGTCGAAATCATTCTGCTTACTGCTTGATCCTTCTTCTCTACCTCTTTCGACCCTGTTACTTGCCTTCCAATTCTTCTTAGAGGAATATGAAAGTAAGGCTTGTTCAGTTTCTCTCTCTGAACTTCTCTGCCTTATCCTCAATTCATGTGCCTCTAAGGAACCCTGAAGTTCATCTAACTTCAATGTATCTAGGTCCTTGGATTCTTCAATGGCTGTAACAACGTAGTCGAATTTCTCGGTTAAGGATCGAAGCACCTTTTCGACCTTCTTCACTTCTTCGACAGTCTCACCATTTCCCCTCATTTGATTAGTTAATGCTACTAACCTCGTAATAAATTCGCCAATCGATTCTGCTTCTGACATCTTCAGGGCTTCGAACTGCTTTCTGAGCGACTGGAGTCGAATCTTCTTCAGTCTGTCTGCTCCGCCATACGAGCTCTTGAGGATGTCCCACGCTGCCTTTGCTGATTCACAGTCGATGATCAGGTTCAGGACATTCGAATCGACACACTGGTGAAGTAAAAACAGCCCTTTTCCGTCCCTCTTTCTCATCGCATTGTGGCTGTTTCTCACCGCTTCTGTGGCGTCATCTGCCACGGGTGGAACTCCATCGTTCACGATGTCAAGTACATCTTGATATCTGAACAGCACCTTCATCTGCGAACACCATCTCTCAAAGTCCTTTCCATCGAAAATGGGGAGGCTCCCCGGAATACCTCCACCATAGTTATCTCTCGCTGCCATGGATCTTAAAGCTCTGATACCAGTTTGTTGGGGATTCTGCGGCGCAGCAGACAGGAGAGGGAAGGGAGAGCGACGGCGCTAGAGAGAGGAAAGGGAGCAATAAAACAGTGAGACTGTAAAGTGATAGGATTAGGTTAAAAGGCAATCAAAAGCATAATTATTCACTAACTAGAGATCCCTATTTATACACAAAACCTAAAGTCAGGCCCAGGCCCCTATTTCGACTAGGCCCAATATGCCAACTACTAACTACACCTTCTACTGTTACTAATTACACTGCAACTTCTACAGCTAACTATAACTTCGACTAGGTAGTATTTCGACAGCTACTTATTACAAATACAAGCAATACACAATTACAGGGTATATTCCAATACTACTGACTTGAGTACAAGTCACATTAATATTAAATCTCATTTGACATTTGAGTTGAGTGAAAATGGGCGAGTATACATACCAATTACATCTCCCTCATCAGTTTCCTGCTCTAGCTCCGTATCTGAATCTGAACCTCATCGATCTCCTCCATCATCATGGTCCCAGCGTTCTCCAGCAGGAGGCATCCAGAAATCTTCCTCTTCTGTGTCACTTTCCTCATTAGATGACTTCCTAACCTCAGCAATAATCTCTTCAACTCCCTTATCCTTTTCGTTCTTGTTTTTCTTCAGATTCAAATAAATAATAAATAAGTAGAATGAAAGATGAAGATTACACTTACAGAGATTTTCGAAAATCTAAGAGAAAAAAGGGAAAGAGTAGACAACAAACATACCACTGAAATTGGTCCTCGCGAAATCGAATGCAACGGTGTTCAAGAATGCAACGGTGTCCGACACTACTAAATGGACGCTAATTTGATGTTTTCTAGTAGTGTAAAAGGATCATAGATAAATCAACTGGACAATGATGCCATAAGAACATGTCAAGACTCGAGGAAGCTCCGTGCTTGACCAACCAGCCAGCAACATGATTTCCTTCCCGCAGAGTATGTGATATGAATTGCGGGCTATTCAGCCTCTACTACTATTGGATACAACAGTAGGCCCAAAAGGAATATAAGAAAGCCTTTAGGATGGAAGAAAAAAATCCACTAGAATAGGCTATCATTATTAATATTAGTTTGTTGATGGTTGTTGTACTATGGTTATTAGTTGTTGGAAATTGTTATAATTGTAACCATTAGTTTGTTGGTAGTTTGTTATAGTTGTAACCATTTTGGTTATTATAACCAAATGGTTAGTTGCTATATAAAGGAACCTTACTAGTAGAAATTGTATCACAAAATCAATTCAATAAAAATTCAAATTTCTCTCTTTACTTCTTGGGAGGAAATTCCCGGCCTCGAACACCGAAACATTATACCTATGAAATAGATCAATTGTAGTTGTTGAACTCGCGATGTTAGATAGGCATAAAAAATTTTGAGCTAGGCTGTTAGGTTATGGAAATACCAATAAGTTAACTGCCTAAATATTTAATGCAAACAAAACTCCCAATTGAGGGGTGAGAAACAATGATATAAAAGGTAATTCTGGTGGAGCATGAATACTTCGTGATGTAATTAAATGTAACCATATTTGTAGGAAAGTCCGTTGAATTAAATCCCGCATGAGATGAGTATACAAGTACAAAAAAGAGTTGAACTAGCTAGATTTGCTGTGAAATGTGTGGGACAATCTCAAATTAATTATTATTCTGATCTGTTCCTTCCAGTGTTAAGTTACCTACTTTTGAATTGGAACAAACCTACTTTTAAAGCTCAAACTCATCGCCAGCCAATGGCCATTACATAAGTAATAACTACACAACACATAATATCCTGGCCTATATATGCAATAAATCAAGCGAATTATAAAGTTGATTTAATAGCTAGCTGCTGAGACGTATGTATGTATGGGCTGACGAAAGAAGGAAACCATAAAATCGGCATAGGTCTTTGTCTTATTAATAACACATTAAAAATAAGTTTTCAAAAAAGTGGTAGTGGAACCGTTTTGTTGGTTGGGAATAGTTAATCATATTAATTGGCGCGAATAGACAGATTAAAAGAATAGACCAGTTACCTAGCTGAACTAACCCTCTCCCTCACGGGATCTCTGTTATATAACAAAACCAATACCCAACACACACACACACACACACTTTTTCTTTGTGTACTTGGAATT

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00664.26	ABC_membrane	46	319	4.60E-109
PF00664.26	ABC_membrane	675	947	4.60E-109
PF00005.30	ABC_tran	388	536	1.10E-74
PF00005.30	ABC_tran	1015	1163	1.10E-74

Gene family

Gene family	Subfamily
Transporter family	ABC

Gene Ontology

GO term	Description	Category
GO:0016020	membrane	Cellular Component
GO:0016887	ATP hydrolysis activity	Molecular Function
GO:0005768	endosome	Cellular Component
GO:0005794	Golgi apparatus	Cellular Component
GO:0005524	ATP binding	Molecular Function

InterPro

InterPro term	Description
IPR039421	Type 1 protein exporter
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR017871	ABC transporter-like, conserved site
IPR003439	ABC transporter-like, ATP-binding domain
IPR036640	ABC transporter type 1, transmembrane domain superfamily
IPR011527	ABC transporter type 1, transmembrane domain
IPR003593	AAA+ ATPase domain

trEMBL

trEMBL term	Description
A0A1S2Y4P8	_

SwissProt

SwissProt term	Description
AB13B_ARATH	ABC transporter B family member 13

KEGG

KO	Description	Enzyme
K05658	ATP-binding cassette, subfamily B (MDR/TAP), member 1	[EC: 7.6.2.2]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT1G27940	P-glycoprotein 13
Medicago sativa L.	MsG0680030746.01.T01	_
Oryza sativa L.	LOC_Os04g38570.1	multidrug resistance protein, putative, expressed
Cucumis sativus L.	Csa004711	_
Glycyrrhiza uralensis Fisch.	Glyur000118s00009648.1	_
Codonopsis lanceolata	Cl_chr02_36420T	_
Arachis hypogaea L.	AH06G13290.1	ABC transporter B family member 13 like

Expression pattern