Gene detail

Detail information of Am02G000510.1 Annotation

Gene ID	Annotation
Am02G000510.1	phytochromobilin:ferredoxin oxidoreductase, chloroplast / phytochromobilin synthase (HY2)

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am02G000510.1	mRNA	Chr02	3007814	3013619	-

Sequences

CDS:

>Am02G000510.1
ATGTCATTTCAAATGCGTTATAATGTAATGAAAACCAAAATCCCTAAACTAGCTCTTCCATCGTTCCACGCTTTCCACTTCCAGAAAACCAAAATCCCTAAACTAGCTCTTCCATCGTTCCACTTCCACGCTTTCCATCGTTCCACGCTCTCCAGAAAAACTCCCTCTCTCCGTCATCGTTCTATCTCTACCCATCGCTCTCTCCGCCAAAGCTCCCTCTCTCCGTCATCTCGCTGCCTTCCTCCGTCGCTCTCTCCTCCCTGCCGCGCCGTCGCCATCTATTTCGTTGTCACCGTCTCTCTCCCAGTCACCGTTGCTTCTGGTTTTTCTTCCTCCGCCAAAGCTCCCTCTCTCCTCCCTGCCGCGCTGTCTTCCTCCGTCGCTACTGTTAAAGCTATGGATCGTAGTTGGATGCAAAGTAATAAGTTGAGTGATGAGTATGCGAACGGGGTGGAAGAGTTTTTAAAGTTTGCTCATACAAACCTTGAAAGTTGTGGTGGAATTTTGGTTTTGGATTTCACTGTCTTTCCAAAAGCAGAGTATGATGTCCCCATATTTTGTGCTAACTTTTTCACGTCGGCTAAAACGAACATTGTTGTCTTGGACCTTAACCCTTTGCATGATATCATCAATCAGGATTACTACAAGGAAAAATACTTTAAAAGCTTAATTCCTCTTGGCCTTAAATATGCTGAGCTTTTTCCATGGGGAGGGAAGCTAACAACTGAGTCTATAAATTTTTTTTCACCAATTGTCATTTGGACAAAGTTTACTTCAAGCCAACAAATATATGATATTCTGTATTCAGCATTCAGAGATTACTACAAGGTTTGGTTAGAATTGATAGGCAATGCAGTAGAAGAAACAGATGAATCTCAAATTTTCCACAATCTTGAAGCACAACATAGATATCTGACATGGAGAGCCGAAAAGGATCCAGGGCAAGGTGTTTTGAAGAAGCTGATTGGGGAGACACTTGCAAAGGATTTATTAAGAAGCTTTCTCTTTAATGGAGTTGATGAACTAGGAAGCAAAAAGTTCAATGACTACTTTCCACAATACTGTGGTGAGCAGGGAAATCTAAATAAGAAAGGCAGTATTGTTGGGAAGTCTTTTGATAATCGCCCTTGGGATGCAAGAGGAGAATTCCTTGAAAAAACCCAACGTTAA

Protein:

Promoter(3k):

>AM02G000510.1
TTGTGGTCATTCATATAGAGCTCTTTCTTTGAGTAATCTATAATTTTGAAAAGCTCTTCAAGAGTTCCAATAATAGAAAACTATAGAAATTCATTTCTTGATATTTTCATAAAGCTTTATGGACAAATTATGTCATTTTTATATCCCTCATTTAGAATGAGAATTGAGATGATTATACCACGTGTGTTCAAATTATATTATTTCATAGAGGGATTGACTCAATTTGAGTAATCATCTCGAGAGTCCCAAAAGTGTTTCTCGGAATATTAAATCCTTCGGGGATCTTCAAATAATTATGACTATCAAATTTGTCAGACTAATAAGTCTTAGTAACATCCATCTTGTTAAATTGAGTTCTTCATGTGCTACAAGGCTAATTAAGTACTTTTCATCCACCCTTGAGCAACATGTCGAGCTTTGTATCTCACAAATTCACCATTCTCATTCTGTTTTTACACAAAAACCCATTTGTATTCGACTGGTTTCACACCTTCATGGTGTTTGGTCTATAGGTCCAAAAACCTTTTGCTTGTAAAACGCGTTTAATTCTGTTTGAATTTAATCTTTCAATTTTGGCCAAATCTCACTTTGTCTATAATCTTTAATAGACTTTGGTTCATGATCCTCACAATCATTTATCACATTTAGCGCTATATTATATGTAAAAACATTATCAACGTTGACTTCATTTCGGTTCCATTTTATTTCATTCTTGACATAATTAATTGAGATCTCTTTAATTTCAAAATATTTAATTTCAGGTACCTGATTAGTTCTTCTGGAACTGAAATGTCAATTATGTCTGAAGACTCTTTTAGAGTTTCTATATCCTTGCTTGGACCATCTTTGGTTTCAGCTCCTTTTCTTGTTCGAGGATTTTTGTTTTTGGAACCGATTGGTCTACCACGCTTCAGGCGCGATTGAGACTCATTTTTTCAATATTCGATTGTCCAACAAGGACATCCATTTTATTGGAGCATTAGCAGCTGATATGTATGATTTGGTCACACCTTTAGATCAGTGAATGCATTTGCTAGATGATTTTCTAAGCTTTGCAAATGAATTATCTTTTGAACTTCTAGTTCACATTGTTTAGTTTGAGGATCAAGATGAGACAATGATAATTCAATCCAACTGATCTCTTTTTCCAGCTGCTTATTCTCCCCCTAATGTTGGGAAATTTAATTCATCAAATGATAGTTACCAAACTGGACTATAAACAAGTCTCCAATTGTTGGCTCAAGATACTTTAACATGGAGATTTATATCCAATATATATTCCCAAAATTCTTTGAGGACCCATCATAGTGCATTGTGAATGGAGGAATTGGAACATACACTACACATCCAAAAATTCTAAGATGGGAAATACTAGGTTCTTGACCAAAAACTAAATGTAAAGGGGGAGAGTTGTGATAACTTGTTGGCTTGATGCGAATCAAAGTTACAACATGCAAAATTGCATGTTCCCAAGTAGAAATTGGAATTTCTTATCTGATAAGTATTGGTCATATAATTAACTTTAGACGTCTAAAGAATGGTGCTTCAAGACCATTTTATGAAAGAACGTATGCTACTATCAATTCTAATCGACATACAATACTTATCAGATGCTTTCAGAGTAATTCACATAATGACCTCTTACTCAAATTAGTGAGCAAACAATCTCACAAACTTCCGGTTGTGAGTTGAGGACAAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAATATCATCTAGTTGATGCATCAATTAAAATCACAAATATCTAAATGGTCCATGTGATTAGTGTACTCGTTTACAAATATCGCTTTATTTAAGTTCTAGAAATACGAGAGACTTATTCTCTCAAATTGCCAATTTCCTTTGACAAAACTAGTGAACACAAAAATTAGTAGATTGAAGAAACTGCTGGCTCTTCAATACAGGCTCACCTAGAAGTTTTAACCATTTTTCGCATCATTATATTATCGGGATGGCCCAACCGATCTCGCCAACAACAAAATTATTATGATATGTAAACTTCTGGTTTACAATATGTGCTTCAATTGCACATATATAAGTGTAGTACAAATCAGAGGAAAAAGCAGACAACTTTTCCACTACACTTGTTCTATCCAAAGTATGTCTCGTTATATAAAGATGTTCAATATCTTCTTCATTTTTTGATTAACATGCCTCGTTATATAAAGATGTTCAATATCTTCTTCATTTTTTGATTCAATATGACATCTATTTGGACAAATATCTTTAAACCTTAGTAAGTTTCTAAGAGACTTAAGAGATTATAGTTTAGTATCAATGTGTACAACAAAATTGTCCTCTAGGTAATTAACAATATACTAACTCTTCTGGAGTCTTCAATTATATTTTGCAAACTTCTGGTTGCAAGTTGATAACAAGTATACAAGTTACTATATGACTTCTGGCCATAACTAGATAATGTATGCAATTTAATATAAAATACACATATATAATCTTAGTTATATTGTAAAAACATAGAATAGCTATCAAACTAAGCTCTATTTTAAGCTAGCTAACCAATAGCATTATAGTTAAAAGGCATTGAGAGAAAATGACAGATAAAACTTCAATTATAATGAATAATATTTTAGTCCTTCAAAATATCAATATGGGATGTAATTTCTACTTCATGATAATCTTGCTAAACGTATACTAAATAGTAAAAATATATAGACTACTAAACTTATGTTCGATTTACTATAACATAATTTTGTTCGCGCTCATATCTATTTAAACAAAAATAATGTATTAAATTTTGACTATTCAAATAACAAAATATAAAACTATTAAGAATGCGTATAACAAATATTACCATCTATATACCTAAAATTGGAGACACACATTTTTCTTCAATAAACAAAACTGTATAAACCACACATACTAGTTTAAAAAAATACTATTTATACATAAAGAATTCGAGACAGACAATTCTAATAGGTACGATCC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF05996.15	Fe_bilin_red	147	337	2.10E-46

Gene family

Gene family	Subfamily
--	--

Gene Ontology

GO term	Description	Category
GO:0051202	phytochromobilin metabolic process	Biological Process
GO:0016636	oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor	Molecular Function
GO:0050897	cobalt ion binding	Molecular Function
GO:0043650	dicarboxylic acid biosynthetic process	Biological Process
GO:0033014	tetrapyrrole biosynthetic process	Biological Process

InterPro

InterPro term	Description
IPR009249	Ferredoxin-dependent bilin reductase

trEMBL

trEMBL term	Description
A0A445GZS4	_

SwissProt

SwissProt term	Description
PFBS_ARATH	Phytochromobilin:ferredoxin oxidoreductase, chloroplastic

KEGG

KO	Description	Enzyme
K08101	phytochromobilin:ferredoxin oxidoreductase	[EC: 1.3.7.4]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G09150	phytochromobilin:ferredoxin oxidoreductase, chloroplast / phytochromobilin synthase (HY2)
Medicago sativa L.	MsG0580030067.01.T01	_
Oryza sativa L.	LOC_Os01g72090.1	phycoerythrobilin ferredoxin oxidoreductase, putative, expressed
Cucumis sativus L.	Csa006436	_
Glycyrrhiza uralensis Fisch.	Glyur000567s00021954.1	_
Codonopsis lanceolata	Cl_chr06_01610T	_
Arachis hypogaea L.	AH17G01360.1	Phytochromobilin:ferredoxin oxidoreductase, chloroplastic like

Expression pattern