Detail information of Am02G000410.1 Annotation
Gene IDAnnotation
Am02G000410.1 endonucleases
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am02G000410.1mRNAChr0224084982412923-

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF03161.16LAGLIDADG_25917565.90E-43
Gene family
Gene familySubfamily
Carbohydrate-Active enzymes FamilyGT1

Gene Ontology
GO termDescriptionCategory
GO:0009507chloroplastCellular Component
GO:0000373Group II intron splicingBiological Process
GO:0045292mRNA cis splicing, via spliceosomeBiological Process
GO:0010239chloroplast mRNA processingBiological Process
GO:0006388tRNA splicing, via endonucleolytic cleavage and ligationBiological Process

InterPro
InterPro termDescription
IPR011990Tetratricopeptide-like helical domain superfamily
IPR002885Pentatricopeptide repeat
IPR004860Homing endonuclease, LAGLIDADG
IPR027434Homing endonuclease

trEMBL
trEMBL termDescription
A0A1S2Y4L9 _

SwissProt
SwissProt termDescription
PP154_ARATHPentatricopeptide repeat-containing protein At2g15820, chloroplastic

KEGG
KODescriptionEnzyme
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Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT2G15820 endonucleases
Medicago sativa L.MsG0180000027.01.T01 _
Oryza sativa L.LOC_Os02g47360.1PPR repeat domain containing protein, putative, expressed
Cucumis sativus L.Csa001416 _
Glycyrrhiza uralensis Fisch.Glyur001041s00027453.1 _
Codonopsis lanceolataCl_chr03_26220T _
Arachis hypogaea L.AH10G32200.1Pentatricopeptide repeat-containing protein At2g15820, chloroplastic like

Expression pattern